BAC Information

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BAC

Clone NameB6Ng01-230B06
Chromosome7 (Build37)
Map Location 133,547,721 - 133,548,594
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip
Downstream geneCd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230B06.g
ACCGA043040
length884
definitionB6Ng01-230B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagcctctctgaagtgatgtgtgtgtgtgtgcacctgtgcaca
tcagtaagttgactgatggttggcagcttcagcatgggtatggtcaccag
aaagaccaggtaggattagaggttgacaatttcagcccattccgcctcca
ggaaggggaggggaaactgaaaggttaagttgatggctactgaagcaatt
aaccatgcctgtgtatacatctggagggaagaagcaagaggatcctaagt
tccaggccagctttaactatggaaaccaaagcagaaaagaggaaagacga
acttggagaactcctgggcagctcaacacaaaaatggatgcctttggaaa
gtgaattgagccctggtttatatcagtttctcaaaagcataggtgtggtg
cactacagatagccttaggatttaccaggctaaggaagggggaagggaag
ggggcagttgtgtccaaggccatctggtctcagaacaaaaacaaacatta
aatagtcttgggtctgcagcaggggccagccttgggcctactgctctggt
cctgtgggatctgacattttcgggtagatgttgtcaggactcaactagac
caaagactgtcacctggtgtcactgaaaagttagttacttgtcagtgggg
agaaatccccatacctttttggggtcatacagatctgtgttgattgtcgc
tcagtgagagtgtaggagatgaagaatttgaaatatattttgtttcctgt
attatcagattacgttttttttttatttaaatttattcccatgtatgtga
taaacactgtagttctctttcagacacaccagaagtgggcattggtttcc
cattcacagatggctgtgaagtcaccatgtggtt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133547721_133548594
seq2: B6Ng01-230B06.g_69_952 (reverse)

seq1  AACCACATGGTGGC-TCACAGCCATCTGTG-ATGGG-AACCAATGCCCAC  47
      |||||||||||| | ||||||||||||||| ||||| |||||||||||||
seq2  AACCACATGGTGACTTCACAGCCATCTGTGAATGGGAAACCAATGCCCAC  50

seq1  TTCTGGTGTGTCTG-AAGAGAACTACAGTG-TTATCACATACAT-GGAAT  94
      |||||||||||||| ||||||||||||||| ||||||||||||| |||||
seq2  TTCTGGTGTGTCTGAAAGAGAACTACAGTGTTTATCACATACATGGGAAT  100

seq1  AAATTTAAAT-AAAAAAAAACGTAATCTGATAATACAGGAA--CAAATAT  141
      |||||||||| ||||||||||||||||||||||||||||||   ||||||
seq2  AAATTTAAATAAAAAAAAAACGTAATCTGATAATACAGGAAACAAAATAT  150

seq1  A-TTCAAATTCTTCATCTCCTACACTCTCACTGAGCGACAATCAACACAG  190
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATTCTTCATCTCCTACACTCTCACTGAGCGACAATCAACACAG  200

seq1  ATCTGTATGACCCCAAAAAGGTATGGGGATTTCTCCCCACTGACAAGTAA  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTATGACCCCAAAAAGGTATGGGGATTTCTCCCCACTGACAAGTAA  250

seq1  CTAACTTTTCAGTGACACCAGGTGACAGTCTTTGGTCTAGTTGAGTCCTG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTTTCAGTGACACCAGGTGACAGTCTTTGGTCTAGTTGAGTCCTG  300

seq1  ACAACATCTACCCGAAAATGTCAGATCCCACAGGACCAGAGCAGTAGGCC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATCTACCCGAAAATGTCAGATCCCACAGGACCAGAGCAGTAGGCC  350

seq1  CAAGGCTGGCCCCTGCTGCAGACCCAAGACTATTTAATGTTTGTTTTTGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCTGGCCCCTGCTGCAGACCCAAGACTATTTAATGTTTGTTTTTGT  400

seq1  TCTGAGACCAGATGGCCTTGGACACAACTGCCCCCTTCCCTTCCCCCTTC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACCAGATGGCCTTGGACACAACTGCCCCCTTCCCTTCCCCCTTC  450

seq1  CTTAGCCTGGTAAATCCTAAGGCTATCTGTAGTGCACCACACCTATGCTT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCCTGGTAAATCCTAAGGCTATCTGTAGTGCACCACACCTATGCTT  500

seq1  TTGAGAAACTGATATAAACCAGGGCTCAATTCACTTTCCAAAGGCATCCA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAAACTGATATAAACCAGGGCTCAATTCACTTTCCAAAGGCATCCA  550

seq1  TTTTTGTGTTGAGCTGCCCAGGAGTTCTCCAAGTTCGTCTTTCCTCTTTT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTGTTGAGCTGCCCAGGAGTTCTCCAAGTTCGTCTTTCCTCTTTT  600

seq1  CTGCTTTGGTTTCCATAGTTAAAGCTGGCCTGGAACTTAGGATCCTCTTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGGTTTCCATAGTTAAAGCTGGCCTGGAACTTAGGATCCTCTTG  650

seq1  CTTCTTCCCTCCAGATGTATACACAGGCATGGTTAATTGCTTCAGTAGCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCCCTCCAGATGTATACACAGGCATGGTTAATTGCTTCAGTAGCC  700

seq1  ATCAACTTAACCTTTCAGTTTCCCCTCCCCTTCCTGGAGGCGGAATGGGC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACTTAACCTTTCAGTTTCCCCTCCCCTTCCTGGAGGCGGAATGGGC  750

seq1  TGAAATTGTCAACCTCTAATCCTACCTGGTCTTTCTGGTGACCATACCCA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTCAACCTCTAATCCTACCTGGTCTTTCTGGTGACCATACCCA  800

seq1  TGCTGAAGCTGCCAACCATCAGTCAACTTACTGATGTGCACAGGTGCACA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAAGCTGCCAACCATCAGTCAACTTACTGATGTGCACAGGTGCACA  850

seq1  CACACACACATCACTTCAGAGAGGCTAAGAATTC  874
      ||||||||||||||||||||||||||||||||||
seq2  CACACACACATCACTTCAGAGAGGCTAAGAATTC  884