BAC Information

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BAC

Clone NameB6Ng01-230C21
Chromosome7 (Build37)
Map Location 7,973,555 - 7,974,534
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
Downstream geneLOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230C21.bB6Ng01-230C21.g
ACCGA043111GA043112
length9971,213
definitionB6Ng01-230C21.b B6Ng01-230C21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactggagaactcctaaagctgataaactatttcactgaagtaa
atagacctaaaattaactcaaataaatcagtggcctttttctacacaaaa
gataaataggctgagaaacaaagtagggaagcaacacccttcaaaatact
cacaaataatataaaatacctttctgtgactctacttaaggaactcaaga
tctgtatgataagaacctcaagtatgtgaagaaggaaattgaagatgatc
tcagaatatggagatcttccatgttcatgaattggcaggattaatatact
aaaaatggccatcttgtcaatagcaatttacagattcaatgcaattcaca
tcaatttccaactcaattcttcagagttagaaaagacaattgcaaattca
tctggaataaaaacaaaaacaaaaacaaaaacaaaaacaaaaacaaccaa
acaaacaaccaaaagaatgaggatagaaaaaaactcttacacgcgttctc
acgaccggccaggaagaacacagcaaaccagaatcttctgcggcaaaact
ttattgcttacatcttcaggagcaagagtgcaagagagcaagagctctat
ttcttacatctttaggagcaagaagcaagagccagagcaagagagcaaaa
gggcgaaaccctgtcccctttaaggagaattattctccgcctaggacgta
ttactccctgattggctgcagcccatcggcccagttatcacgagaaaggc
agaacacatggcgggaaaactgcccctgcacgtgtgcagattatgtttac
cacttagaacacagctgtcagcaccatcttataatggcaaatgtgagggc
ggctcccaacatctcccccttttcttttaataagaaaataagagcaatag
gccacccatataatgagagtggagataggaggtcaaatccccagtgtgca
agtaaaggagccatgtacaggattagctctagctcacaggcttttac
gaattccttacaaccccatgggacaaggaatagttgaacgtgctcatcgc
accttaaagaattggctttttaaaacaaaagaggggcagctatatccccc
aaggtcaccaaaggcccaccttgccttcaccttatttgtcctaaatttct
tgcacaccgatatcaagggccagtctgcagcggatcgccactggcatcca
gttacttctaattcttatgcattggtaaaatggaaggaccccctgactaa
tgaatggaagggtccagatccagttctaatttggggtaggggctcagttt
gtgttttttcacgagatgaaaatggagcgcggtggctgccagagagatta
attcgtcagatgaacacagattctgactcttctggtatcattctaaagac
taaaattccttttgtgcttagaattcagctgagagcgaaagctcccaaag
ctgttttccagctactctctgagccagctcccaacaggaggccggagact
agcctcagctttacaatttgcatttgaataaagtacctagacttcccgaa
agaagttctgctttcctactttctcactgtcgagattttgtctttcaagc
aggtaaatcaacattctcgaagtggaccagcggatgtgcatccccgcccc
cctagagcacacaggtagctgctgttatctcctttccaaggacatttcca
gcacgtggctttcagtctgagttaaaaattaggtttaccaagagggctag
aagagtagatatttctatattaataaagattggtttttattttgatagac
aggcttagtcccttagctgacctctggcttttcacccttgctgttactgc
aaggtgtccttaggctgtggaaaaaacagggatgaggaggaacgacttcc
agctcctattttagccacaagtcgtggtgttactaatgacataattcttg
cctaggtcttgctaaatctgaggttgataattctcctttagagctgccac
agcactcagaactgtgcataactggctttgtgattgtacaaatcagttat
gggccatcgcttgtgcagaggcacactgcaaggaaggtccaagcctgaca
ttctctggactttcctggtaaatagccgatttaagaggttggctatctat
ttggctaaatcaaatttcgtcttgcctcacctccctaaagatctccaaga
gctaccatggttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7973555_7974534
seq2: B6Ng01-230C21.b_42_1021

seq1  GAATTCAACTGGAGAACTCCTAAAGCTGATAAACTATTTCACTGAAGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGAGAACTCCTAAAGCTGATAAACTATTTCACTGAAGTAA  50

seq1  ATAGACCTAAAATTAACTCAAATAAATCAGTGGCCTTTTTCTACACAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCTAAAATTAACTCAAATAAATCAGTGGCCTTTTTCTACACAAAA  100

seq1  GATAAATAGGCTGAGAAACAAAGTAGGGAAGCAACACCCTTCAAAATACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATAGGCTGAGAAACAAAGTAGGGAAGCAACACCCTTCAAAATACT  150

seq1  CACAAATAATATAAAATACCTTTCTGTGACTCTACTTAAGGAACTCAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAATATAAAATACCTTTCTGTGACTCTACTTAAGGAACTCAAGA  200

seq1  TCTGTATGATAAGAACCTCAAGTATGTGAAGAAGGAAATTGAAGATGATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATGATAAGAACCTCAAGTATGTGAAGAAGGAAATTGAAGATGATC  250

seq1  TCAGAATATGGAGATCTTCCATGTTCATGAATTGGCAGGATTAATATACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATATGGAGATCTTCCATGTTCATGAATTGGCAGGATTAATATACT  300

seq1  AAAAATGGCCATCTTGTCAATAGCAATTTACAGATTCAATGCAATTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGGCCATCTTGTCAATAGCAATTTACAGATTCAATGCAATTCACA  350

seq1  TCAATTTCCAACTCAATTCTTCAGAGTTAGAAAAGACAATTGCAAATTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCCAACTCAATTCTTCAGAGTTAGAAAAGACAATTGCAAATTCA  400

seq1  TCTGGAATAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATAAAAACAAAAACAAAAACAAAAACAAAAACAAAAACAACCAA  450

seq1  ACAAACAACCAAAAGAATGAGGATAGAAAAAAACTCTTACACGCGTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAACCAAAAGAATGAGGATAGAAAAAAACTCTTACACGCGTTCTC  500

seq1  ACGACCGGCCAGGAAGAACACAGCAAACCAGAATCTTCTGCGGCAAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCGGCCAGGAAGAACACAGCAAACCAGAATCTTCTGCGGCAAAACT  550

seq1  TTATTGCTTACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTTACATCTTCAGGAGCAAGAGTGCAAGAGAGCAAGAGCTCTAT  600

seq1  TTCTTACATCTTTAGGAGCAAGAAGCAAGAGCCAGAGCAAGAGAGCAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACATCTTTAGGAGCAAGAAGCAAGAGCCAGAGCAAGAGAGCAAAA  650

seq1  GGGCGAAACCCTGTCCCCTTTAAGGAGAATTATTCTCCGCCTAGGACGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGAAACCCTGTCCCCTTTAAGGAGAATTATTCTCCGCCTAGGACGTA  700

seq1  TTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTATCACGAGAAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCCCTGATTGGCTGCAGCCCATCGGCCCAGTTATCACGAGAAAGGC  750

seq1  AGAACACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACATGGCGGGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTAC  800

seq1  CACTTAGAACACAGCTGTCAGCACCATCTTATAATGGCAAATGTGAGGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGAACACAGCTGTCAGCACCATCTTATAATGGCAAATGTGAGGGC  850

seq1  GGCTCCCAACATCTCCCCCTTTTCTTTTAATAAGAAAATAAGAGCAATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCAACATCTCCCCCTTTTCTTTTAATAAGAAAATAAGAGCAATAG  900

seq1  GCCACCCATATTAATGAGAGTGGAGATA-GAGGTCAAATCCCCAGTGTGC  949
      |||||||||| ||||||||||||||||| |||||||||||||||||||||
seq2  GCCACCCATA-TAATGAGAGTGGAGATAGGAGGTCAAATCCCCAGTGTGC  949

seq1  AGGTAAAGGAGCCATGTACAGGATTAGCTCT  980
      | |||||||||||||||||||||||||||||
seq2  AAGTAAAGGAGCCATGTACAGGATTAGCTCT  980