BAC Information

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BAC

Clone NameB6Ng01-230I04
Chromosome7 (Build37)
Map Location 77,954,809 - 78,100,603
singlet/doubletdoublet
Overlap genenone
Upstream geneNr2f2, LOC100042833, B130024G19Rik, LOC100042838, LOC665486, LOC100041957
Downstream geneLOC665535
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230I04.bB6Ng01-230I04.g
ACCGA043357GA043358
length7011,163
definitionB6Ng01-230I04.b B6Ng01-230I04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,099,903 - 78,100,603)(77,954,809 - 77,955,994)
sequence
gaattcaaagtagaaatttaaacatatctgaatgaagtcttcataggtaa
ggaccgtttggaaaactttggggcaagccaaggataagctgctggggatg
agaatcatagaaggaatggccagcagaacaaacagtggtcaaatgtccta
cactgtgccagatggaggagcctggggatgcaagactggagcatgctggg
atatggatgttctgtgaaattgctgaagtcatcggaagaagaggtgctag
caatgtagactgagaacagaattggggtctggagaactggagagatcctg
acaacactaaggggatacctgaaagcttgctgggtgctggctggggggag
acaagcaggaaaggaggcatagatgatgtaaatgtctggtttgggttgca
gattgaatgatggtgctggtcagatgtggaggacagaggaaggaacttcc
ttttgggacagacatgaggaagacagtgagtttctatgggcaccaactac
ttaaaattgagtcttacactttagaaacctgtgagaccttgtcttgtaag
atgttatctttgactattgctactcccccaatataattcttattaatata
agtatcgtaagctaaaaacctaagtactattaacacaatatgtgtgctta
catgcctgcttccttgtgtgcacacacaagtgtgtgtgtgtggggggggg
g

gaattccatttttaataactcaggaatgactccttcatagggctaccatg
catctttactctccagtctgttaagatgttgagagcacttctgaatcttg
ccttgacaggggaggaacatgaacattctctttccccgggcggtgcaggc
tttctgttttcccaggagagattctcccagcttctccccacctaacaagc
cccttcctggagattaagagataatgcatctgaaataacaaggactcacc
caggcttttgctttatctgaggatcaaatcccatgaatctccgagtctag
ctggttgcatatacaattgggcaaacgtcagctatcacccccattacagt
tctaacaacttttagaacggcgaggaagggaaagttcccatcttaagtca
gggctaaacattcttgggcttcagtggtgtgtttttctttcagcaggcca
gacggtggtgttggcagaagcccctccaatgtgtttgtttctcttgaggt
cggacgtgctcagcgagccctcttaagtatgaacagaccacagacccaac
ctgtcccagggctgaagcacaaatgtcaaaggcgtgaaaacaggagtctg
gagattggaggccattcgcctctgacactctcaggaactgggcctccagc
ctgggtgaagagctgactggaggggaaaagcgggagggaggtgggaagca
cggcaaaaatgattggcgtggcagttaagtgttgcataatatacccagta
caagatccaggcctacttaaaggtctgaattttgaaggaaaacagatcat
gatttgtaaccaggcttggatacatgcgtcatttataacactgcgcagga
ggtctaagcgcgcacctcttttaccatggggtgtgtgctgctcatgagac
cctcattaacctcaagcgggatggaggacgcgccgtgagtggccaccaga
gactatcaggagaagatgtaaacagtaagcaagccctgagcaagcccagt
tgtttgcgtatcccgtcagcacatatttctgaactgtttgcagtttcttc
aaatctaagatttttcaagactggttgggcaacatccttccaggactgct
gccactagctttacattgtagagcagcaatgtgataatcaaggctgagca
gatgcatatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78099903_78100603
seq2: B6Ng01-230I04.b_50_750 (reverse)

seq1  CCCCCCCCCCACACACACACACTTGTGTGTGCACACAAGGAAGCAGGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCACACACACACACTTGTGTGTGCACACAAGGAAGCAGGCAT  50

seq1  GTAAGCACACATATTGTGTTAATAGTACTTAGGTTTTTAGCTTACGATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCACACATATTGTGTTAATAGTACTTAGGTTTTTAGCTTACGATAC  100

seq1  TTATATTAATAAGAATTATATTGGGGGAGTAGCAATAGTCAAAGATAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTAATAAGAATTATATTGGGGGAGTAGCAATAGTCAAAGATAACA  150

seq1  TCTTACAAGACAAGGTCTCACAGGTTTCTAAAGTGTAAGACTCAATTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACAAGACAAGGTCTCACAGGTTTCTAAAGTGTAAGACTCAATTTTA  200

seq1  AGTAGTTGGTGCCCATAGAAACTCACTGTCTTCCTCATGTCTGTCCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTGGTGCCCATAGAAACTCACTGTCTTCCTCATGTCTGTCCCAAA  250

seq1  AGGAAGTTCCTTCCTCTGTCCTCCACATCTGACCAGCACCATCATTCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTCCTTCCTCTGTCCTCCACATCTGACCAGCACCATCATTCAAT  300

seq1  CTGCAACCCAAACCAGACATTTACATCATCTATGCCTCCTTTCCTGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAACCCAAACCAGACATTTACATCATCTATGCCTCCTTTCCTGCTTG  350

seq1  TCTCCCCCCAGCCAGCACCCAGCAAGCTTTCAGGTATCCCCTTAGTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCCAGCCAGCACCCAGCAAGCTTTCAGGTATCCCCTTAGTGTTG  400

seq1  TCAGGATCTCTCCAGTTCTCCAGACCCCAATTCTGTTCTCAGTCTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATCTCTCCAGTTCTCCAGACCCCAATTCTGTTCTCAGTCTACATT  450

seq1  GCTAGCACCTCTTCTTCCGATGACTTCAGCAATTTCACAGAACATCCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCACCTCTTCTTCCGATGACTTCAGCAATTTCACAGAACATCCATA  500

seq1  TCCCAGCATGCTCCAGTCTTGCATCCCCAGGCTCCTCCATCTGGCACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATGCTCCAGTCTTGCATCCCCAGGCTCCTCCATCTGGCACAGT  550

seq1  GTAGGACATTTGACCACTGTTTGTTCTGCTGGCCATTCCTTCTATGATTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGACATTTGACCACTGTTTGTTCTGCTGGCCATTCCTTCTATGATTC  600

seq1  TCATCCCCAGCAGCTTATCCTTGGCTTGCCCCAAAGTTTTCCAAACGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCCCAGCAGCTTATCCTTGGCTTGCCCCAAAGTTTTCCAAACGGTC  650

seq1  CTTACCTATGAAGACTTCATTCAGATATGTTTAAATTTCTACTTTGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTATGAAGACTTCATTCAGATATGTTTAAATTTCTACTTTGAATT  700

seq1  C  701
      |
seq2  C  701


seq1: chr7_77954809_77955994
seq2: B6Ng01-230I04.g_67_1229

seq1  GAATTCCATTTTTAATAACTCAGGAATGACTCCTTCATAGGGCTACCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTTTAATAACTCAGGAATGACTCCTTCATAGGGCTACCATG  50

seq1  CATCTTTACTCTCCAGTCTGTTAAGATGTTGAGAGCACTTCTGAATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTACTCTCCAGTCTGTTAAGATGTTGAGAGCACTTCTGAATCTTG  100

seq1  CCTTGACAGGGGAGGAACATGAACATTCTCTTTCCCCGGGCGGTGCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAGGGGAGGAACATGAACATTCTCTTTCCCCGGGCGGTGCAGGC  150

seq1  TTTCTGTTTTCCCAGGAGAGATTCTCCCAGCTTCTCCCCACCTAACAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTTCCCAGGAGAGATTCTCCCAGCTTCTCCCCACCTAACAAGC  200

seq1  CCCTTCCTGGAGATTAAGAGATAATGCATCTGAAATAACAAGGACTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTGGAGATTAAGAGATAATGCATCTGAAATAACAAGGACTCACC  250

seq1  CAGGCTTTTGCTTTATCTGAGGATCAAATCCCATGAATCTCCGAGTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTGCTTTATCTGAGGATCAAATCCCATGAATCTCCGAGTCTAG  300

seq1  CTGGTTGCATATACAATTGGGCAAACGTCAGCTATCACCCCCATTACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTGCATATACAATTGGGCAAACGTCAGCTATCACCCCCATTACAGT  350

seq1  TCTAACAACTTTTAGAACGGCGAGGAAGGGAAAGTTCCCATCTTAAGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAACTTTTAGAACGGCGAGGAAGGGAAAGTTCCCATCTTAAGTCA  400

seq1  GGGCTAAACATTCTTGGGCTTCAGTGGTGTGTTTTTCTTTCAGCAGGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAAACATTCTTGGGCTTCAGTGGTGTGTTTTTCTTTCAGCAGGCCA  450

seq1  GACGGTGGTGTTGGCAGAAGCCCCTCCAATGTGTTTGTTTCTCTTGAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTGGTGTTGGCAGAAGCCCCTCCAATGTGTTTGTTTCTCTTGAGGT  500

seq1  CGGACGTGCTCAGCGAGCCCTCTTAAGTATGAACAGACCACAGACCCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACGTGCTCAGCGAGCCCTCTTAAGTATGAACAGACCACAGACCCAAC  550

seq1  CTGTCCCAGGGCTGAAGCACAAATGTCAAAGGCGTGAAAACAGGAGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCAGGGCTGAAGCACAAATGTCAAAGGCGTGAAAACAGGAGTCTG  600

seq1  GAGATTGGAGGCCATTCGCCTCTGACACTCTCAGGAACTGGGCCTCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGGAGGCCATTCGCCTCTGACACTCTCAGGAACTGGGCCTCCAGC  650

seq1  CTGGGTGAAGAGCTGACTGGAGGGGAAAAGCGGGAGGGAGGTGGGAAGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTGAAGAGCTGACTGGAGGGGAAAAGCGGGAGGGAGGTGGGAAGCA  700

seq1  CGGCAAAAATGATTGGCGTGGCAGTTAAGTGTTGCATAATATACCCAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAAAAATGATTGGCGTGGCAGTTAAGTGTTGCATAATATACCCAGTA  750

seq1  CAAGATCCAGGCCTACTTAAAGGTCTGAATTTTGAAGGAAAACAGATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCCAGGCCTACTTAAAGGTCTGAATTTTGAAGGAAAACAGATCAT  800

seq1  GATTTGTAACCAGGCTTGGATACATGCGTCATTTATAACACTGCGCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTAACCAGGCTTGGATACATGCGTCATTTATAACACTGCGCAGGA  850

seq1  GGTCTAAGCGCGCACCTCTTTTACCATGGGGTGTGTGCTGCTCATGAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTAAGCGCGCACCTCTTTTACCATGGGGTGTGTGCTGCTCATGAGAC  900

seq1  CCTCATTAACCTCAAGCGGGATGGAGGACGCGCCGTGAGTGGCCACCAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTAACCTCAAGCGGGATGGAGGACGCGCCGTGAGTGGCCACCAGA  950

seq1  GACTATCAGGAGAAGATGTAAACAGTAAGCAAGCCCTGAGCAAGCCCAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATCAGGAGAAGATGTAAACAGTAAGCAAGCCCTGAGCAAGCCCAGT  1000

seq1  TGTTTGCGTATCCCGTCAGCAACATATTTCTGAACTGTTTGCAAGTTTCT  1050
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  TGTTTGCGTATCCCGTCAGC-ACATATTTCTGAACTGTTTGC-AGTTTCT  1048

seq1  TCCAAATTCTTAAGATTTTTCAAAGACTTGGGTGGGCCAACATTCTTCCC  1100
      | |||||   ||||||||||| ||||||  ||| || |||||| ||||| 
seq2  T-CAAAT--CTAAGATTTTTC-AAGACT--GGTTGGGCAACATCCTTCCA  1092

seq1  AGACCTTGCTGGCAACTAGCTTTACATTTGTAGAGTTGGGCAATTTGTTG  1150
       |||  |||| || |||||||||||| ||||||||    ||||| ||   
seq2  GGAC--TGCT-GCCACTAGCTTTACA-TTGTAGAG--CAGCAATGTG---  1133

seq1  ATAAAAATCAAAAGCCTTGAGCAGATGCATATATTT  1186
         | ||||  ||| | |||||||||||||||||||
seq2  ---ATAATC--AAGGC-TGAGCAGATGCATATATTT  1163


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