BAC Information

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BAC

Clone NameB6Ng01-230I16
Chromosome7 (Build37)
Map Location 110,980,102 - 110,981,219
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1
Downstream geneEG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230I16.bB6Ng01-230I16.g
ACCGA043381GA043382
length1,1081,178
definitionB6Ng01-230I16.b B6Ng01-230I16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccccagcagtgcaggttgcttttcaggtgttggtggcttctgt
aaccatggatctagctcacaagtaccacagaggccttggactatttcctc
aagattactggagcataatcttctatattcagggagatatgtccaccttt
gcaacttttccccaagaaaaagttagttaaatttcatttcctttatgttg
ttgttttgttttgttttctttccccctagggatgagaaaagtctcagaga
gcctctaagtaggaagcttttatataatatacaaatcttaaaggaaataa
ttaaacctcatcactactagggttttagtgaaggctgggtattaaaattg
caccagtaaatgtaattcataaaattatatattatgtgtaacaataaata
tgcatatgtaattcttacctgaactggagaaagctgtaaaagaacttagt
attttctacatgaccaagaaaaatctaagttttgattgtgtgcatccact
gaggagttgggacaggtaaaatgagaagagaaatcttctctcaatggagg
aggggctacttggagaagaggcattaaaaattgtgtaaatctcctaattt
gcttggtaactgaatgagagaaaggcagtttttatttatatatttatttt
tatttcattttaattcagattgtggctcctagaggtttgcctgtgctcca
gtggttgatcttatatctatgcttatatgaggagtactagctgaacttta
tgggtcaaaaaaagaggctataaagtaaggatcaggtaggagtttctggg
aaaacttgggaagtgggttgagagagtgaatatgatcaaaatacattgta
tacaggcatgtgattataaagaatgaaaaatatatcttaaatttgaaaac
atggctggattataatgtttgagtatcaggaagggacatcatgtgctaat
actattgatatttgttgcttgtgatgaccaatgggaagaaagatgtttgc
tgaatagtgcgacacgtagataagtagagatcactatattgagttagtat
cgcactgttctcagttatgcatggatgaagatcctaagcttgatgataaa
tagagcga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcatggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttacttataatagccagaagctggaagtaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcaactattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaatacataaaactcaag
acaaatgaagactgaagtgaggacatatgcccctccttagaagtgggaac
aaaacacccttggaaggagttacagagacaaagtttggagctgagatgaa
agggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa
ggacccagatatagctgtctcatgtgagactatgctggggcctagcaaca
cagaagtggatgctcacagtcagctaatggatggatcactgggctccatg
gagagctagagaaagtactcaagagctaaagggatctgcaacttttagtg
atcagattatgaactaccagtaccccggagctcctgactctagctgcata
tgtattcaaaagatggctagtcgccatctactgcagagagtcaatgaact
gcaaccttaattggccagttacgaatgccatgccgaaggcattgggtgag
ttaaggaacgtatttcttacatgagtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110980102_110981219
seq2: B6Ng01-230I16.b_41_1148 (reverse)

seq1  TCGCTTTTATTTATCATCAAGGTTTTGGGATCTTCATCCCCTGCCTAAAC  50
      |||| | ||||||||||||||   || |||||||||| || ||| | |||
seq2  TCGC-TCTATTTATCATCAAG--CTTAGGATCTTCAT-CCATGCAT-AAC  45

seq1  TGAGAACAGTGTGATACT-ACTCTATTATAGTGTTTTTCTACTTTATCTA  99
      ||||||||||| |||||| |||| | |||||||  | ||||| |||||||
seq2  TGAGAACAGTGCGATACTAACTC-AATATAGTG-ATCTCTAC-TTATCTA  92

seq1  TGTGTCCCACTATTCAG-AAACATCTTTCTTCCCCTTGGTCATCACAAGC  148
       ||||| |||||||||| |||||||||||||||| |||||||||||||||
seq2  CGTGTCGCACTATTCAGCAAACATCTTTCTTCCCATTGGTCATCACAAGC  142

seq1  AACAAATATTCAATAGTATTAGCACATGATGTCCCTTCCGAATACTCAAA  198
      |||||||| ||||||||||||||||||||||||||||||  |||||||||
seq2  AACAAATA-TCAATAGTATTAGCACATGATGTCCCTTCCTGATACTCAAA  191

seq1  CATTATAATCCAGCCATGTTTTTCAAATTTTAAGATATATTTTTTCATTC  248
      |||||||||||||||||| |||||||| ||||||||||| ||||||||||
seq2  CATTATAATCCAGCCATG-TTTTCAAA-TTTAAGATATA-TTTTTCATTC  238

seq1  TTTATAATCACATGCCTGTATACAATGTATTTTGATCATATTCACTCTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATCACATGCCTGTATACAATGTATTTTGATCATATTCACTCTCT  288

seq1  CAACCCACTTCCCAAGTTTTCCCAGAAACTCCTACCTGATCCTTACTTTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACTTCCCAAGTTTTCCCAGAAACTCCTACCTGATCCTTACTTTA  338

seq1  TAGCCTCTTTTTTTGACCCATAAAGTTCAGCTAGTACTCCTCATATAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCTTTTTTTGACCCATAAAGTTCAGCTAGTACTCCTCATATAAGC  388

seq1  ATAGATATAAGATCAACCACTGGAGCACAGGCAAACCTCTAGGAGCCACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATATAAGATCAACCACTGGAGCACAGGCAAACCTCTAGGAGCCACA  438

seq1  ATCTGAATTAAAATGAAATAAAAATAAATATATAAATAAAAACTGCCTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAATTAAAATGAAATAAAAATAAATATATAAATAAAAACTGCCTTT  488

seq1  CTCTCATTCAGTTACCAAGCAAATTAGGAGATTTACACAATTTTTAATGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTCAGTTACCAAGCAAATTAGGAGATTTACACAATTTTTAATGC  538

seq1  CTCTTCTCCAAGTAGCCCCTCCTCCATTGAGAGAAGATTTCTCTTCTCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCCAAGTAGCCCCTCCTCCATTGAGAGAAGATTTCTCTTCTCAT  588

seq1  TTTACCTGTCCCAACTCCTCAGTGGATGCACACAATCAAAACTTAGATTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTGTCCCAACTCCTCAGTGGATGCACACAATCAAAACTTAGATTT  638

seq1  TTCTTGGTCATGTAGAAAATACTAAGTTCTTTTACAGCTTTCTCCAGTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGTCATGTAGAAAATACTAAGTTCTTTTACAGCTTTCTCCAGTTC  688

seq1  AGGTAAGAATTACATATGCATATTTATTGTTACACATAATATATAATTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGAATTACATATGCATATTTATTGTTACACATAATATATAATTTT  738

seq1  ATGAATTACATTTACTGGTGCAATTTTAATACCCAGCCTTCACTAAAACC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTACATTTACTGGTGCAATTTTAATACCCAGCCTTCACTAAAACC  788

seq1  CTAGTAGTGATGAGGTTTAATTATTTCCTTTAAGATTTGTATATTATATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGTGATGAGGTTTAATTATTTCCTTTAAGATTTGTATATTATATA  838

seq1  AAAGCTTCCTACTTAGAGGCTCTCTGAGACTTTTCTCATCCCTAGGGGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTTCCTACTTAGAGGCTCTCTGAGACTTTTCTCATCCCTAGGGGGA  888

seq1  AAGAAAACAAAACAAAACAACAACATAAAGGAAATGAAATTTAACTAACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACAAAACAAAACAACAACATAAAGGAAATGAAATTTAACTAACT  938

seq1  TTTTCTTGGGGAAAAGTTGCAAAGGTGGACATATCTCCCTGAATATAGAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTGGGGAAAAGTTGCAAAGGTGGACATATCTCCCTGAATATAGAA  988

seq1  GATTATGCTCCAGTAATCTTGAGGAAATAGTCCAAGGCCTCTGTGGTACT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGCTCCAGTAATCTTGAGGAAATAGTCCAAGGCCTCTGTGGTACT  1038

seq1  TGTGAGCTAGATCCATGGTTACAGAAGCCACCAACACCTGAAAAGCAACC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTAGATCCATGGTTACAGAAGCCACCAACACCTGAAAAGCAACC  1088

seq1  TGCACTGCTGGGGTGAATTC  1118
      ||||||||||||||||||||
seq2  TGCACTGCTGGGGTGAATTC  1108