BAC Information

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BAC

Clone NameB6Ng01-231D09
Chromosome7 (Build37)
Map Location 13,077,939 - 13,078,885
singlet/doubletsinglet
Overlap geneZfp606
Upstream geneZscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423, LOC628946, LOC100043075, LOC100042433, V1rg7, LOC100042437, V1rg3, LOC100042446, LOC100043092, V1rg9, V1rg12, V1rg8, V1rg11, Zfp551, EG666065
Downstream gene2900092C05Rik, EG637908, EG666085, Vmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231D09.bB6Ng01-231D09.g
ACCGA043871GA043872
length1,1151,017
definitionB6Ng01-231D09.b B6Ng01-231D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttatctttccaagacttttatcctgaaggggtgctggattttg
ttaaatgtgttctcagcatgtaatgaaatcaccatatggtttttttcctt
gagtttgtttatatagtggatctcgttgatagatttccatatattgaacc
atccttgtatccctgggaggaagcctacttgatcatgatggttgatcatt
ttggtgtgttcttggactcagtttgcaagaattttattgagaattttggc
atcgatattcataagggatattggtatgaaattctcattctttgttggat
ctttgtgtggtttaggtatcacagtaattgttttttcatagaatgagttg
ggtagttccttctgtttctattttgtggaatagtttgaggagcatttgta
ttaggtattctttgaagatcaaatagaattctgcattaaacccatctggt
actgggctttttttttttttttcattggtagattattaatgactgtttct
atttctttaggggacataagactgtttatattgtttatctgatcctgatt
taactttggtacctggtaactgtctagaaaattgtccatttcatccaggt
tttccagttttgttgagtataagcctttgtagtaggatctgatgattttt
tttttttttggatttcctcggtttctgttgtttacctccctttttgtatc
tgattttattaatttggaatactgtctctgtgcccgttgattagcctggc
taagggtttatctataattctgatttctccaaagaaccagctcctggttt
gtgattctcaataagttctttttgtccttcttggtaagtttagccctgag
tttgaattaatttcctgccaatctttctcggcatattttgctccttttgt
tctagaagccttcaaggtggccatcaagctgccagtacagcttcttccac
atttcttttgaggcactaagcatagagtccttcaacgcttaatgtgccct
aaaggttgatagagtgtccattccgatccaaggctttatttctgacagtc
atctagaaacatagtcccctcatgttagctctggcttgctgaaccctact
aatgtctagagactt
gaattctgtgaacttggcacagagtacagccaaagcttaaacttaattcc
atctcagagagtttcacaattagaacgtttctacaaacctgatacacatc
ttgaaagttggagctgtaattcagccataatgtatgcagataaggttacc
tgtgaaaatagtgattataataaagccttttgccagtctgttcagcctgt
ataccctgcaaaaatgcaaactggagataatctgttcaaatgtactgatg
ctgtgaagtctttcaatcatattatacaatttggtgatcataaagcagta
catacaggagaaaaactctatggatataaggaataccatcaaatctttaa
ccagagcccatcacttattgaataccccaaacttcaaattggaggaaacc
agtatgagaaatataaggaatatgagaatatcttttatttctcatctttt
atggaacatcaaaaaattggcagtgtagaaaaaacatataaatacaatga
atgggagaaagtctttggttacgactcattacttactcaacatacaagca
catacactgcagagaaaccctatgaattcaacaaatgtggaacatctttt
atctggagctcttaccttattcagcataagaaaactcatcctggagagaa
accctatgaatgtgataaatgtggaaaagtttttaggaatcgttcagccc
ttactaagcatgaacggacacacactggagtaaaaccctatgaatgtaac
aaatgtgggaaagccttcagttggaattctcatcttattgtacacacaag
aatccatacaggagaaaaaccttatgtatgtaatgaatgtggaaaatctt
tcaactggaactcccatcttattggacatcagagaactcacactggagaa
aaaaccttttgagtgcactgaatgtggcaagtcttttagctggagttccc
atctcattgcccacatgcggatgcatactggagaagaaaccctttaatgt
gatgaatgtgaaaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_13077939_13078885
seq2: B6Ng01-231D09.g_66_1013

seq1  GAATTCTGTGAACTTGGCACAGAGTACAGCCAAAGCTTAAACTTAATTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGAACTTGGCACAGAGTACAGCCAAAGCTTAAACTTAATTCC  50

seq1  ATCTCAGAGAGTTTCACAATTAGAACGTTTCTACAAACCTGATACACATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAGAGTTTCACAATTAGAACGTTTCTACAAACCTGATACACATC  100

seq1  TTGAAAGTTGGAGCTGTAATTCAGCCATAATGTATGCAGATAAGGTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAGTTGGAGCTGTAATTCAGCCATAATGTATGCAGATAAGGTTACC  150

seq1  TGTGAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAATAGTGATTATAATAAAGCCTTTTGCCAGTCTGTTCAGCCTGT  200

seq1  ATACCCTGCAAAAATGCAAACTGGAGATAATCTGTTCAAATGTACTGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTGCAAAAATGCAAACTGGAGATAATCTGTTCAAATGTACTGATG  250

seq1  CTGTGAAGTCTTTCAATCATATTATACAATTTGGTGATCATAAAGCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAAGTCTTTCAATCATATTATACAATTTGGTGATCATAAAGCAGTA  300

seq1  CATACAGGAGAAAAACTCTATGGATATAAGGAATACCATCAAATCTTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGAGAAAAACTCTATGGATATAAGGAATACCATCAAATCTTTAA  350

seq1  CCAGAGCCCATCACTTATTGAATACCCCAAACTTCAAATTGGAGGAAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCCCATCACTTATTGAATACCCCAAACTTCAAATTGGAGGAAACC  400

seq1  AGTATGAGAAATATAAGGAATATGAGAATATCTTTTATTTCTCATCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGAAATATAAGGAATATGAGAATATCTTTTATTTCTCATCTTTT  450

seq1  ATGGAACATCAAAAAATTGGCAGTGTAGAAAAAACATATAAATACAATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACATCAAAAAATTGGCAGTGTAGAAAAAACATATAAATACAATGA  500

seq1  ATGGGAGAAAGTCTTTGGTTACGACTCATTACTTACTCAACATACAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAGAAAGTCTTTGGTTACGACTCATTACTTACTCAACATACAAGCA  550

seq1  CATACACTGCAGAGAAACCCTATGAATTCAACAAATGTGGAACATCTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACTGCAGAGAAACCCTATGAATTCAACAAATGTGGAACATCTTTT  600

seq1  ATCTGGAGCTCTTACCTTATTCAGCATAAGAAAACTCATCCTGGAGAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGCTCTTACCTTATTCAGCATAAGAAAACTCATCCTGGAGAGAA  650

seq1  ACCCTATGAATGTGATAAATGTGGAAAAGTTTTTAGGAATCGTTCAGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATGAATGTGATAAATGTGGAAAAGTTTTTAGGAATCGTTCAGCCC  700

seq1  TTACTAAGCATGAACGGACACACACTGGAGTAAAACCCTATGAATGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGCATGAACGGACACACACTGGAGTAAAACCCTATGAATGTAAC  750

seq1  AAATGTGGGAAAGCCTTCAGTTGGAATTCTCATCTTATTGTACACACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGGGAAAGCCTTCAGTTGGAATTCTCATCTTATTGTACACACAAG  800

seq1  AATCCATACAGGAGAAAAACCTTATGTATGTAATGAATGTGGAAAATCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCATACAGGAGAAAAACCTTATGTATGTAATGAATGTGGAAAATCTT  850

seq1  TCAACTGGAACTCCCATCTTATTGGACATCAGAGAACTCACACTGGAG-A  899
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCAACTGGAACTCCCATCTTATTGGACATCAGAGAACTCACACTGGAGAA  900

seq1  AAAACCTTTTGAGTGCACTGAATGTGGCAAGTCTTTTAGCTGGAGTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTTTTGAGTGCACTGAATGTGGCAAGTCTTTTAGCTGGAGTTC  948