BAC Information

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BAC

Clone NameB6Ng01-231F08
Chromosome7 (Build37)
Map Location 131,112,508 - 131,249,909
singlet/doubletdoublet
Overlap geneEG628779
Upstream gene4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream geneEG545999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231F08.bB6Ng01-231F08.g
ACCGA043961GA043962
length1,1461,086
definitionB6Ng01-231F08.b B6Ng01-231F08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,112,508 - 131,113,646)(131,248,818 - 131,249,909)
sequence
gaattcatgctgtactatgccttttttttatgcttgtttcttcttagctg
tgaacttctgggatcacctgatcactgctcggcgcgtacacaaaacagat
gataaaggatttctgcaagacaagacactgctcgctttggctgtggattg
cacaatccaactgtatttatggtagaaaaaaagagggaggggaccaaact
gcaagtaagagcttctggggaagagatgtttacccgccggaacatattag
attctgataagatgcttggaagaccttatgtttttaggttccaagtagtt
gggatcgatttaaactcatggccacccctgcatttctgctcaacagaatt
aaattgtggatccctttctctgaggtctgagaagctggcatattcttctc
cttgggcctatagtttcaagcagatttactttctccaaaggatggattct
gtcttctttagacctgtttggtggtggtggtgctctacagctgaaagacc
tgtcctagtgttagatgtcattccatagcagtttgtggccaccctttgct
ggttttctgtctgcattgagggtgtgtggagtttcagaagtgtctggacc
cctggtgggatagatcccggagacctggagtccaggcagtgtacagctct
gtctatccatccatcatccatctgtccatcttagcactgtcagttgtccc
cagtgatagggatccgactttcatattaaatctgttgccgcttgctctgt
gtttccctccttctcccttagtcaaaccatgtctcccagttttgtgatga
ttatggcttattccacagcaccgctaccatcttctcacgcatgatccatt
cttcaaacctcttgcacctgccaggagtttctggggggagcagtgcctgc
ctctgcatttctcccctttcatctctgtaaatctccctgtggaatgcttt
ttccctcctgtgtcaggcgtcttgtttaaatgattgtttctagtattcta
caggttttttatttacattccttatacgatgtgtctaccattctcataag
tgttgtggatcttccccagaacgcacgaaacagcattggatagttgcatc
tacactaagcattgcctccttcaacatggcccatgaggaaggtaaa

gaattcatggctctatgacctgggtaaggtctaactacaacagtgtttac
tagaaatccttgcattgatagcagtctttctttatgctactaccatgtga
caacagtagatactagaaagataggaccacaccatggtcagggtgtacct
catggacacatgcttaaacacttcctaggtatgtgaacaggtgaccagga
tccaagtttatctctatgaaatggctaagcatcataagtaattttctgtc
tttacctttctcatttaattttctactctattctgtaatgaattttactg
ctctacagtttccatataataaaaaacaaagccattacacagttagcatg
atagggtttgacaaccatgtacttatgagttacttctacaaaaaaaccaa
aaaacaaaaacaaaaacaaacaaacaaacaaaaaacccaagttagaaagc
aaagccattgcctccaaaatccctttgtgctcctcccagaccactgactg
ccaatcaaccatagacaaacaagatcaagatcatatcaaacattatcttt
ttttgtctgataatgcccttttaaatttattttttgagaatttaaaaaag
actaatgtttttgcctttcatgcatgatgtcatgcgtagcactgcccttt
ctggtgtagctgtcaatgatcccttgaatgaacatgtatcacaatctctt
gagcatttatccttacatgtgaattgctttcaggtttgggtttttataaa
gctgtcatgcacatttttaaagaagtcatcttgtagatatgagttcaaat
ttctcttaagtaaagtatctggcagtggacttctggtttactgggtaaac
agaggtaaatttttataagaaattaacaagcagttctttaccacagcatg
gccattgaacacatcccacaagcaaggcagtattccaactgtgggcccca
catcctaacatttgctttcatagtttttgcttttgccattgtgaagataa
agaatatttcttgtagttttaatttagatttccttggtaaataattatta
tggctgtttcatcactcctagctcttatatgctttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_131112508_131113646
seq2: B6Ng01-231F08.b_47_1192

seq1  GAATTCATGCTGTACTATGCCTTTTTTTTATGCTTGTTTCTTCTTAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTGTACTATGCCTTTTTTTTATGCTTGTTTCTTCTTAGCTG  50

seq1  TGAACTTCTGGGATCACCTGATCACTGCTCGGCGCGTACACAAAACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGGGATCACCTGATCACTGCTCGGCGCGTACACAAAACAGAT  100

seq1  GATAAAGGATTTCTGCAAGACAAGACACTGCTCGCTTTGGCTGTGGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGATTTCTGCAAGACAAGACACTGCTCGCTTTGGCTGTGGATTG  150

seq1  CACAATCCAACTGTATTTATGGTAGAAAAAAAGAGGGAGGGGACCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCCAACTGTATTTATGGTAGAAAAAAAGAGGGAGGGGACCAAACT  200

seq1  GCAAGTAAGAGCTTCTGGGGAAGAGATGTTTACCCGCCGGAACATATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAAGAGCTTCTGGGGAAGAGATGTTTACCCGCCGGAACATATTAG  250

seq1  ATTCTGATAAGATGCTTGGAAGACCTTATGTTTTTAGGTTCCAAGTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATAAGATGCTTGGAAGACCTTATGTTTTTAGGTTCCAAGTAGTT  300

seq1  GGGATCGATTTAAACTCATGGCCACCCCTGCATTTCTGCTCAACAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCGATTTAAACTCATGGCCACCCCTGCATTTCTGCTCAACAGAATT  350

seq1  AAATTGTGGATCCCTTTCTCTGAGGTCTGAGAAGCTGGCATATTCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGGATCCCTTTCTCTGAGGTCTGAGAAGCTGGCATATTCTTCTC  400

seq1  CTTGGGCCTATAGTTTCAAGCAGATTTACTTTCTCCAAAGGATGGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCCTATAGTTTCAAGCAGATTTACTTTCTCCAAAGGATGGATTCT  450

seq1  GTCTTCTTTAGACCTGTTTGGTGGTGGTGGTGCTCTACAGCTGAAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTAGACCTGTTTGGTGGTGGTGGTGCTCTACAGCTGAAAGACC  500

seq1  TGTCCTAGTGTTAGATGTCATTCCATAGCAGTTTGTGGCCACCCTTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGTGTTAGATGTCATTCCATAGCAGTTTGTGGCCACCCTTTGCT  550

seq1  GGTTTTCTGTCTGCATTGAGGGTGTGTGGAGTTTCAGAAGTGTCTGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTGTCTGCATTGAGGGTGTGTGGAGTTTCAGAAGTGTCTGGACC  600

seq1  CCTGGTGGGATAGATCCCGGAGACCTGGAGTCCAGGCAGTGTACAGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGGGATAGATCCCGGAGACCTGGAGTCCAGGCAGTGTACAGCTCT  650

seq1  GTCTATCCATCCATCATCCATCTGTCCATCTTAGCACTGTCAGTTGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCCATCCATCATCCATCTGTCCATCTTAGCACTGTCAGTTGTCCC  700

seq1  CAGTGATAGGGATCCGACTTTCATATTAAATCTGTTGCCGCTTGCTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATAGGGATCCGACTTTCATATTAAATCTGTTGCCGCTTGCTCTGT  750

seq1  GTTTCCCTCCTTCTCCCTTAGTCAAACCATGTCTCCCAGTTTTGTGATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCTCCTTCTCCCTTAGTCAAACCATGTCTCCCAGTTTTGTGATGA  800

seq1  TTATGGCTTATTCCACAGCACCGCTACCATCTTCTCACGCATGATCCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTTATTCCACAGCACCGCTACCATCTTCTCACGCATGATCCATT  850

seq1  CTTCAAACCTCTTGCACCTGCCAGGAG-TTCT-GGGGGAGCAGTGCCTGC  898
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  CTTCAAACCTCTTGCACCTGCCAGGAGTTTCTGGGGGGAGCAGTGCCTGC  900

seq1  CTCTGCA-TTCTCCCCTTTCATCTCTGTAAATCTCCCTGTGG-ATGC-TT  945
      ||||||| |||||||||||||||||||||||||||||||||| |||| ||
seq2  CTCTGCATTTCTCCCCTTTCATCTCTGTAAATCTCCCTGTGGAATGCTTT  950

seq1  TTCCCTCCTGTGTCAGGCGTCCTGTTTAAATGA-TGTTTCTAGTATTCCT  994
      ||||||||||||||||||||| ||||||||||| ||||||||||||| ||
seq2  TTCCCTCCTGTGTCAGGCGTCTTGTTTAAATGATTGTTTCTAGTATT-CT  999

seq1  ACAGG-TTTTTATTTACAT--CCTATACGATGTGTCTAAACCATCTTCAT  1041
      ||||| |||||||||||||  | ||||||||||||||  |||||  ||||
seq2  ACAGGTTTTTTATTTACATTCCTTATACGATGTGTCT--ACCATTCTCAT  1047

seq1  AAGTGTTGTGGATCTACCCCAGACGGAAAGAAACAGGCATTGGAT-GTTG  1090
      ||||||||||||||| |||||||  | | |||||| ||||||||| ||||
seq2  AAGTGTTGTGGATCTTCCCCAGAACGCACGAAACA-GCATTGGATAGTTG  1096

seq1  CATCTACACAAAGCATTGCCTCCTCACACA-GGCCCATGAGGGAGGTAAA  1139
      ||||||||| ||||||||||||||   ||| ||||||||||| |||||||
seq2  CATCTACACTAAGCATTGCCTCCTTCAACATGGCCCATGAGGAAGGTAAA  1146


seq1: chr7_131248818_131249909
seq2: B6Ng01-231F08.g_69_1154 (reverse)

seq1  AAAACCATAT-AGAGCTAGGAAGTTGATGAAAACAAGCCAATATAATTAT  49
      |||| ||||| ||||||||||   ||||||||   |||||  ||||||||
seq2  AAAAGCATATAAGAGCTAGGA--GTGATGAAA--CAGCCATAATAATTAT  46

seq1  TTACCAAGGAAATCTAAATTAAAACTACCAAGAAATATTCTATATCCTTC  99
      ||||||||||||||||||||||||||| ||||||||||||| ||| ||||
seq2  TTACCAAGGAAATCTAAATTAAAACTA-CAAGAAATATTCTTTAT-CTTC  94

seq1  ACAATGGCAAAAAGCAAAAAACTATGAAAGCAAATGTTAGGATGTGGGGG  149
      |||||||| |||||| ||||||||||||||||||||||||||||||||| 
seq2  ACAATGGC-AAAAGC-AAAAACTATGAAAGCAAATGTTAGGATGTGGGGC  142

seq1  CCACAGTTGGAATACTGCCTTGCTTGTGGGATGTGTTCAAT-GCCATGCT  198
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCACAGTTGGAATACTGCCTTGCTTGTGGGATGTGTTCAATGGCCATGCT  192

seq1  GTGGTAAAGAACTGCTTGTTAATTTCTTATAAAAATTTACCTCTGTTTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAAGAACTGCTTGTTAATTTCTTATAAAAATTTACCTCTGTTTAC  242

seq1  CCAGTAAACCAGAAGTCCACTGCCAGATACTTTACTTAAGAGAAATTTGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAAACCAGAAGTCCACTGCCAGATACTTTACTTAAGAGAAATTTGA  292

seq1  ACTCATATCTACAAGATGACTTCTTTAAAAATGTGCATGACAGCTTTATA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATCTACAAGATGACTTCTTTAAAAATGTGCATGACAGCTTTATA  342

seq1  AAAACCCAAACCTGAAAGCAATTCACATGTAAGGATAAATGCTCAAGAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAAACCTGAAAGCAATTCACATGTAAGGATAAATGCTCAAGAGA  392

seq1  TTGTGATACATGTTCATTCAAGGGATCATTGACAGCTACACCAGAAAGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATACATGTTCATTCAAGGGATCATTGACAGCTACACCAGAAAGGG  442

seq1  CAGTGCTACGCATGACATCATGCATGAAAGGCAAAAACATTAGTCTTTTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTACGCATGACATCATGCATGAAAGGCAAAAACATTAGTCTTTTT  492

seq1  TAAATTCTCAAAAAATAAATTTAAAAGGGCATTATCAGACAAAAAAAGAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTCAAAAAATAAATTTAAAAGGGCATTATCAGACAAAAAAAGAT  542

seq1  AATGTTTGATATGATCTTGATCTTGTTTGTCTATGGTTGATTGGCAGTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGATATGATCTTGATCTTGTTTGTCTATGGTTGATTGGCAGTCA  592

seq1  GTGGTCTGGGAGGAGCACAAAGGGATTTTGGAGGCAATGGCTTTGCTTTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTGGGAGGAGCACAAAGGGATTTTGGAGGCAATGGCTTTGCTTTC  642

seq1  TAACTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTGGTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGTTTTTTGGTT  692

seq1  TTTTTGTAGAAGTAACTCATAAGTACATGGTTGTCAAACCCTATCATGCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTAGAAGTAACTCATAAGTACATGGTTGTCAAACCCTATCATGCT  742

seq1  AACTGTGTAATGGCTTTGTTTTTTATTATATGGAAACTGTAGAGCAGTAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGTAATGGCTTTGTTTTTTATTATATGGAAACTGTAGAGCAGTAA  792

seq1  AATTCATTACAGAATAGAGTAGAAAATTAAATGAGAAAGGTAAAGACAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTACAGAATAGAGTAGAAAATTAAATGAGAAAGGTAAAGACAGA  842

seq1  AAATTACTTATGATGCTTAGCCATTTCATAGAGATAAACTTGGATCCTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTTATGATGCTTAGCCATTTCATAGAGATAAACTTGGATCCTGG  892

seq1  TCACCTGTTCACATACCTAGGAAGTGTTTAAGCATGTGTCCATGAGGTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTTCACATACCTAGGAAGTGTTTAAGCATGTGTCCATGAGGTAC  942

seq1  ACCCTGACCATGGTGTGGTCCTATCTTTCTAGTATCTACTGTTGTCACAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGACCATGGTGTGGTCCTATCTTTCTAGTATCTACTGTTGTCACAT  992

seq1  GGTAGTAGCATAAAGAAAGACTGCTATCAATGCAAGGATTTCTAGTAAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTAGCATAAAGAAAGACTGCTATCAATGCAAGGATTTCTAGTAAAC  1042

seq1  ACTGTTGTAGTTAGACCTTACCCAGGTCATAGAGCCATGAATTC  1092
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGTAGTTAGACCTTACCCAGGTCATAGAGCCATGAATTC  1086


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