BAC Information

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BAC

Clone NameB6Ng01-232N02
Chromosome7 (Build37)
Map Location 11,590,624 - 11,591,233
singlet/doubletsinglet
Overlap geneGm397
Upstream geneLOC100042163, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521, LOC628525, LOC100042206, Nlrp4d, LOC100042214, V1re10, Zik1, EG628580, V1re9, V1rl1, EG628596, Nlrp4b, LOC333184, V1re13, BQ559217, LOC637237, LOC236479, EG665879, Zscan4b, LOC665793, EG665798
Downstream geneZscan4-ps1, LOC635187, LOC100042997, LOC100042293, Zscan4d, LOC628737, LOC676750, LOC672893, LOC546931, LOC675762, Zscan4e, LOC665857, LOC665861, Zscan4f, LOC673742, LOC665887, LOC637541, LOC100042361, Zscan4-ps2, LOC675782, LOC100042386, LOC665926, LOC637571, LOC100043042, LOC628853, V1rg1, V1rg2, EG628898, V1rg5, V1rg6, LOC665999, V1rg4, LOC100042423
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232N02.bB6Ng01-232N02.g
ACCGA045056GA045057
length1,202610
definitionB6Ng01-232N02.b B6Ng01-232N02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtctggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaatctttgagtgtcttatcaagatc
cttcctcagcggaacctgcccaccccttcattcaaggggttctggatctg
caaactgtctcaagtctggaaattgattcactggccgagtttgttgttta
ccacgatctaatgtagcctttctttcatttggctgtttaccacgatctaa
tgtagcctttctttcatttgtttgagaatttttctgcttatgcagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
ttggttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgttattataaacattctttt
gtctacgctgtccattataataactagaatcaccttgtctcgggcgattc
aatgctgccacctggcccttgttacctcggaatccaactaaacccagtga
atttaattcatctaattgagcagaagcatctccaatgctaagatctggca
caaggaaaagggaaagaacaaaacccttcaaatgtgctggtgcccctctc
accaatttgcgtcttatagagctggtgaaaggcatatcttctggaccttc
ccattgtggacattatgctttacacaatatatccactctagcattgcaat
ttccctaagtcttaaaatcccttcatcacactagccatggaattattcag
caatctcaagtcatttccagtaagccatcttttgataacacctcagccaa
cccattccaacacgttggacccctttttacctatgcgagcctccgattga
agctagatcctctactcaagaccatgtcaataaaacctcagccgtgtccg
ta
gaattcctcttcagtgtggtactatttccattcactacagtgacttacaa
cacttgactaggagatgatcttcttccaaagaagagtcaatcattgcatt
agagatgcaaaactagagctgagttaggattccttatgtgattcaatcag
caggaaaaaatgtctttccttattttgtttgcttgcttgtatttgattcc
cccttttggcattatctgttcctctgggtcagactgaccttggatctctg
ggcttaataggcagtgctggggactactgactctcctgattcaatttcta
ttactttgagtactatggataaaatggtaatctgccccacccaggaacag
gagttttgatagaatcactgtgtgaatttaatcgtcatcagtaactgact
aacggaagccaggcgctataaaagggaaccaatcctaatagaacctcaga
tgaagcagagccaaggcagagacacacagtgcctccctgggcttcttggc
atcacccttgaagttcaccggagaaagcagtgaggtggaggaataggtaa
actttccttcctagtggtcttgaatgtgtaagtatatgtgtatttatgtg
tgtgtatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_11590624_11591233
seq2: B6Ng01-232N02.g_67_676

seq1  GAATTCCTCTTCAGTGTGGTACTATTTCCATTCACTACAGTGACTTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTCAGTGTGGTACTATTTCCATTCACTACAGTGACTTACAA  50

seq1  CACTTGACTAGGAGATGATCTTCTTCCAAAGAAGAGTCAATCATTGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGACTAGGAGATGATCTTCTTCCAAAGAAGAGTCAATCATTGCATT  100

seq1  AGAGATGCAAAACTAGAGCTGAGTTAGGATTCCTTATGTGATTCAATCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGCAAAACTAGAGCTGAGTTAGGATTCCTTATGTGATTCAATCAG  150

seq1  CAGGAAAAAATGTCTTTCCTTATTTTGTTTGCTTGCTTGTATTTGATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAAATGTCTTTCCTTATTTTGTTTGCTTGCTTGTATTTGATTCC  200

seq1  CCCTTTTGGCATTATCTGTTCCTCTGGGTCAGACTGACCTTGGATCTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTGGCATTATCTGTTCCTCTGGGTCAGACTGACCTTGGATCTCTG  250

seq1  GGCTTAATAGGCAGTGCTGGGGACTACTGACTCTCCTGATTCAATTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAATAGGCAGTGCTGGGGACTACTGACTCTCCTGATTCAATTTCTA  300

seq1  TTACTTTGAGTACTATGGATAAAATGGTAATCTGCCCCACCCAGGAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTGAGTACTATGGATAAAATGGTAATCTGCCCCACCCAGGAACAG  350

seq1  GAGTTTTGATAGAATCACTGTGTGAATTTAATCGTCATCAGTAACTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGATAGAATCACTGTGTGAATTTAATCGTCATCAGTAACTGACT  400

seq1  AACGGAAGCCAGGCGCTATAAAAGGGAACCAATCCTAATAGAACCTCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGAAGCCAGGCGCTATAAAAGGGAACCAATCCTAATAGAACCTCAGA  450

seq1  TGAAGCAGAGCCAAGGCAGAGACACACAGTGCCTCCCTGGGCTTCTTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGAGCCAAGGCAGAGACACACAGTGCCTCCCTGGGCTTCTTGGC  500

seq1  ATCACCCTTGAAGTTCACCGGAGAAAGCAGTGAGGTGGAGGAATAGGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCTTGAAGTTCACCGGAGAAAGCAGTGAGGTGGAGGAATAGGTAA  550

seq1  ACTTTCCTTCCTAGTGGTCTTGAATGTGTAAGTATATGTGTATTTATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTCCTAGTGGTCTTGAATGTGTAAGTATATGTGTATTTATGTG  600

seq1  TGTGTATGTG  610
      ||||||||||
seq2  TGTGTATGTG  610