BAC Information

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BAC

Clone NameB6Ng01-233A02
Chromosome7 (Build37)
Map Location 96,241,184 - 96,242,178
singlet/doubletsinglet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneTmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233A02.g
ACCGA045192
length1,004
definitionB6Ng01-233A02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcaggaattggggcaagggtatggcagtggggcaggatgggag
ggcaatggaatgggtctttggaaatcaaatctaggatctagggaataaag
gagggttcacaggcaggcaggtcactcacctgtttttctgattggtttgg
tgtgctccatgcaatggaagccctcccaagttggggctgggagcacagca
gcaggagggctcacaagtgggacagagtagtggtacaatagaatgggtct
gtggggattataacacagttcaaattagctattggaaatcacatttatag
aatttcataaagaaaagggatgttttggccaagtcttttaaggtttagtg
tgtattattggagggaggaccttaataatgaacccgaggcttctactgct
ttccaatcctggtctgtgtttatgaatgaaaggagttgccagactgtgga
agtggacctcatcccatgttttatatgttgcttcatccaatcaaggtgca
ttgacgcctagattctcttcaaggacatcttaaggacaggctttcactat
tgcttcttcagcttgactaggaatgccaagactcatgctatataatgtta
aagaagcaccttccttttgaaagctcactcttcatggataactttaataa
aaaaaagaaattctgcaagaaacatttatgtcacttgattattcttttta
aatagttgatatagcagagtaacattttaaaaatgaattgttagcatttc
tggttgtttgcctaagtgcagttcatcaactctggtgactccagagagga
ttttgtggcatagattgttatgatggatccttcagtctcctctgtctcta
cacaaatcttgtttcctcctctatacactgccacctgtcactgtacaaca
tgttcatgcctgggatattgttactgtcagccttttctgtctcctatagt
agagtgcatttcattgcgacagagaccatagttcttatcattcactggtc
gtta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96241184_96242178
seq2: B6Ng01-233A02.g_66_1061 (reverse)

seq1  AGTGAATGATAAGAACTATGGTCCCTGTCCTCAAGAAATGCACTTTTAAT  50
      ||||||||||||||||||||||| |||||   | ||||||||| | || |
seq2  AGTGAATGATAAGAACTATGGTCTCTGTCGCAATGAAATGCAC-TCTACT  49

seq1  ATTAGAAACAGAAAAGGTTGACAGTAACAATATCCCAGGCATGAACATGT  100
      ||  || |||||||||| ||||||||||||||||||||||||||||||||
seq2  ATAGGAGACAGAAAAGGCTGACAGTAACAATATCCCAGGCATGAACATGT  99

seq1  TGTACAGTGACAGGTGGCAGGGTATAGAGGAGGAAACAAGCTTTGTCTAG  150
      |||||||||||||||||||| ||||||||||||||||||| ||||| |||
seq2  TGTACAGTGACAGGTGGCAGTGTATAGAGGAGGAAACAAGATTTGTGTAG  149

seq1  AGACAGAGGAGACTGAAGGATCCATCATAACAATCTATGCCACAAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGAGACTGAAGGATCCATCATAACAATCTATGCCACAAAATCC  199

seq1  TCCCTGGAGTCACCAGAGTTGATGAACTGCACTTAGGCAAACAACCAGAA  250
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGAGTCACCAGAGTTGATGAACTGCACTTAGGCAAACAACCAGAA  249

seq1  ATGCTAACAATTCATTTTTAAAATGTTAC-CTGCTATATCAACTATTTAA  299
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGCTAACAATTCATTTTTAAAATGTTACTCTGCTATATCAACTATTTAA  299

seq1  AAAGAATAATCAAGTGACATAAATGTTTCTTGCAGAATTTC-TTTTTTTA  348
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAAGAATAATCAAGTGACATAAATGTTTCTTGCAGAATTTCTTTTTTTTA  349

seq1  TTAAAGTTATCCCTGAAGAGTGAGCTTTCAAAAGGAAGGTGCTTCTTTAA  398
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTATCCATGAAGAGTGAGCTTTCAAAAGGAAGGTGCTTCTTTAA  399

seq1  CATTATATAGCCTGAGTCTTGGCATTCCTAGTCAAGCTGAAGAAGCAATA  448
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATTATATAGCATGAGTCTTGGCATTCCTAGTCAAGCTGAAGAAGCAATA  449

seq1  GTGAAAGCCTGTCCTTAAGATGTCCTTGAAGAGAATCTAGGCGTCAATGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAGCCTGTCCTTAAGATGTCCTTGAAGAGAATCTAGGCGTCAATGC  499

seq1  ACCTTGATTGGATGAAGCAACATATAAAACATGGGATGAGGTCCACTTCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGATTGGATGAAGCAACATATAAAACATGGGATGAGGTCCACTTCC  549

seq1  ACAGTCTGGCAACTCCTTTCATTCATAAACACAGACCAGGATTGGAAAGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCTGGCAACTCCTTTCATTCATAAACACAGACCAGGATTGGAAAGC  599

seq1  AGTAGAAGCCTCGGGTTCATTATTAAGGTCCTCCCTCCAATAATACACAC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGCCTCGGGTTCATTATTAAGGTCCTCCCTCCAATAATACACAC  649

seq1  TAAACCTTAAAAGACTTGGCCAAAACATCCCTTTACTTTATGAAATTCTA  698
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAAACCTTAAAAGACTTGGCCAAAACATCCCTTTTCTTTATGAAATTCTA  699

seq1  TAAATGTGATTTCCAATAGCTAATTTGAACTGTGTTATAATCCCCACAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGATTTCCAATAGCTAATTTGAACTGTGTTATAATCCCCACAGA  749

seq1  CCCATTCTATTGTACCACTACTCTGTCCCACTTGTGAGCCCTCCTGCTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTATTGTACCACTACTCTGTCCCACTTGTGAGCCCTCCTGCTGC  799

seq1  TGTGCTCCCAGCCCCAACTTGGGAGGGCTTCCATTGCATGGAGCACACCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCCCAGCCCCAACTTGGGAGGGCTTCCATTGCATGGAGCACACCA  849

seq1  AACCAATCAGAAAAACAGGTGAGTGACCTGCCTGCCTGTGAACCCTCCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AACCAATCAGAAAAACAGGTGAGTGACCTGCCTGCCTGTGAACCCTCCTT  899

seq1  TATTCCCTAGATCCTAGATTTGATTTCCAAAGACCCATTCCATTGCCCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTAGATCCTAGATTTGATTTCCAAAGACCCATTCCATTGCCCTC  949

seq1  CCATCCTGCCCCACTGCCATACCCTTGCCCCAATTCCTGCAGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTGCCCCACTGCCATACCCTTGCCCCAATTCCTGCAGAATTC  996