BAC Information

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BAC

Clone NameB6Ng01-233K10
Chromosome7 (Build37)
Map Location 108,067,895 - 108,068,462
singlet/doubletsinglet
Overlap geneArhgef17
Upstream geneEG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l
Downstream geneP2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a, EG630138, Art2b, Clpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233K10.b
ACCGA045646
length714
definitionB6Ng01-233K10.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccggagggagggccatgtcagttcgtctatctgtttggaaaaggc
ttactttctatatatcgggaatacatatttgggggaattttatgaaatga
tattgtatcatatggggtgacatgacgtgttctatgctgcattgtggagc
aggagagatggaggccatgctcctggctgccagccagccccagagctggg
cctcctgggatggccgagaccccattcccccacccctggacaaacattca
gttctttcccaggacggggcactggaggttaaggaacagatgtggaaggg
aagggaagatgagaaggaccctcccccaccccagtaaaagtcctgtggac
tctgtctttcttggctgctggtttttgttctggtacatggttgtccccct
ggacgggtgtgttcagatgccaacgccttgacaaaccaggaggtcagaag
ggagaggaagagaggtagggccttgggtgccagagtcacccatctggaaa
gactccagacatcagctttgccttctccccactcccggcccctgcttcat
taagaaggtgaaagtcttgataccctatgataatgagtcctcctgccact
gccccagcgctgcctggggattgccagcatgggggtggggggcagtcacc
aagagttccagaaggagtggaaagtgatgtgggtccactggcattttggg
ggaattctatcaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108067895_108068462
seq2: B6Ng01-233K10.b_184_755 (reverse)

seq1  TTTGAT-CAATTCCCCC-AAATGCCAGTGGACCC-CATCAC-TTCCCCTC  46
      ||||||  ||||||||| |||||||||||||||| |||||| |||| |||
seq2  TTTGATAGAATTCCCCCAAAATGCCAGTGGACCCACATCACTTTCCACTC  50

seq1  CTTCTGGAACTCTTGGTGACTGCCCCCCACCCCCATGCTGGCAATCCCCA  96
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGAACTCTTGGTGACTGCCCCCCACCCCCATGCTGGCAATCCCCA  100

seq1  GGCAGCGCTGGGGCAGTGGCAGGAGGACTCATTATCATAGGGTATCAAGA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCGCTGGGGCAGTGGCAGGAGGACTCATTATCATAGGGTATCAAGA  150

seq1  CTTTCACCTTCTTAATGAAGCAGGGGCCGGGAGTGGGGAGAAGGCAAAGC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACCTTCTTAATGAAGCAGGGGCCGGGAGTGGGGAGAAGGCAAAGC  200

seq1  TGATGTCTGGAGTCTTTCCAGATGGGTGACTCTGGCACCCAAGGCCCTAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTGGAGTCTTTCCAGATGGGTGACTCTGGCACCCAAGGCCCTAC  250

seq1  CTCTCTTCCTCTCCCTTCTGACCTCCTGGTTTGTCAAGGCGTTGGCATCT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTCCTCTCCCTTCTGACCTCCTGGTTTGTCAAGGCGTTGGCATCT  300

seq1  GAACACACCCGTCCAGGGGGACAACCATGTACCAGAACAAAAACCAGCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACACCCGTCCAGGGGGACAACCATGTACCAGAACAAAAACCAGCAG  350

seq1  CCAAGAAAGACAGAGTCCACAGGACTTTTACTGGGGTGGGGGAGGGTCCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAAGACAGAGTCCACAGGACTTTTACTGGGGTGGGGGAGGGTCCT  400

seq1  TCTCATCTTCCCTTCCCTTCCACATCTGTTCCTTAACCTCCAGTGCCCCG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTTCCCTTCCCTTCCACATCTGTTCCTTAACCTCCAGTGCCCCG  450

seq1  TCCTGGGAAAGAACTGAATGTTTGTCCAGGGGTGGGGGAATGGGGTCTCG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAAAGAACTGAATGTTTGTCCAGGGGTGGGGGAATGGGGTCTCG  500

seq1  GCCATCCCAGGAGGCCCAGCTCTGGGGCTGGCTGGCAGCCAGGAGCATGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCCCAGGAGGCCCAGCTCTGGGGCTGGCTGGCAGCCAGGAGCATGG  550

seq1  CCTCCATCTCTCCTGCTCCACA  568
      ||||||||||||||||||||||
seq2  CCTCCATCTCTCCTGCTCCACA  572