BAC Information

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BAC

Clone NameB6Ng01-233M16
Chromosome2 (Build37)7 (Build37)
Map Location 115,593,737 - 115,593,80895,732,576 - 95,733,734
singlet/doubletsingletsinglet
Overlap geneBC052040
Upstream geneLOC100043222, LOC100043232, LOC100043236
Downstream geneMrg1, G630016G05Rik, 2810405F15Rik, LOC433464
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233M16.bB6Ng01-233M16.g
ACCGA045748GA045749
length9881,145
definitionB6Ng01-233M16.b B6Ng01-233M16.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(115,593,737 - 115,593,808)(95,732,576 - 95,733,734)
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagtatggctaagataaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaagaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctagagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgttaagtggatattagcccaaaacc
tatgatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttgaagctgagatga
aaggatggaccatatagagactgccatatccagggatccaccccagaatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaaa
cacagaagtggatgctcactgtcagctaatggatggatcacaaggctccc
aatggaggagctagagaaagtacccaagagcttaaagg

gaattctctccctttgctttccaaatgagagttaaaatacacagactttg
cctaggggtaggcaaggaatgatgatggatcactggccagacccttccaa
atgattcccaacttcctcttgcttatgacttagagtgtggaactatttta
gatatagatgactcttttagccaatgtctctgaataatgaataagttatc
tggccaaataaatatgctcaatatttatcttaagtttgtcatctattatc
tattgtttagctgagttgttagaggggatagatgttgtacagttacaggc
gagtagaaaaagattccattcacattcaagtctcaaaacatttatgtaaa
ataaaggactgcagacatacacatgagtagccactgcccttttgagatat
tttgtagcattaatggaaatctctcaattttaagtgacatccgtaaagtg
attttccataagcaagcatggttgtaaaataattgtgtcccatttgcata
ctaaacaatctctgagagagggatttcatccaataaatcaggaggaaatg
aacttggaccactaaaacaagttcacatacttgaaacaaccattaaatga
tatgcttggttttatgagtgcttcatcttctcatttgattaggaagcttt
ttataaagtttctgttaaagaataagataagcgggatatataaatgagca
caatatttatcatctacctacctacttctgtaaccaagtatctacctacc
tacctacctacctacctacctacctacctacctataatttatctattatt
ttatcaggagatttgtggccctaaattaagcctgtaattgctgttcatgt
tagtgttttcacactgtgatgttatagtagcaactcactagtgagtagga
atccacctcagtaaatagtaaagagtacacacacatgttatgcacatgga
gatgagaggagagaaagagagagttataattgccaattgcaagctctgct
ttagttgtatgtttagatgtatggattctgacttacatacaaaaggtacc
ttattctatgctgaagtatacattctgcaatattaatttgaaacctgcat
gccaatatccctatggaatgccaattagatttttattccacatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_115593737_115593808
seq2: B6Ng01-233M16.b_713_784 (reverse)

seq1  CAAATTTTGTCTCTGTAACTCCTTCCATGGGTATTTTGTTCCCATTTCTA  50
      |||| ||||||||||||||||||||||||||| ||||||||||| |||||
seq2  CAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCACTTCTA  50

seq1  GGAAGGGGCAAAGTGTCCACAC  72
       | ||||||| |||||||||||
seq2  AGGAGGGGCATAGTGTCCACAC  72


seq1: chr7_95732576_95733734
seq2: B6Ng01-233M16.g_65_1209 (reverse)

seq1  ACATGTGG-ATAAAAATTAATATTTGCATT-CATAGGG-TATATGCATGC  47
      |||||||| ||||||||  | ||| ||||| ||||||| |||  ||||||
seq2  ACATGTGGAATAAAAATCTA-ATTGGCATTCCATAGGGATATTGGCATGC  49

seq1  AGGTGTTTAAAATAATTTATTGCAGGAAATGTATTACTCCAGCATAGAAT  97
      |||| || ||| |||  ||||||||  |||||| |||| |||||||||||
seq2  AGGT-TTCAAATTAA--TATTGCAG--AATGTA-TACTTCAGCATAGAAT  93

seq1  -AGGTACTTTTTGGTATTGTAAAGTCAGAATCCATTACATTCTTAAACAT  146
       |||||| |||| ||| ||| ||||||||||||| |||||   |||||||
seq2  AAGGTACCTTTT-GTA-TGT-AAGTCAGAATCCA-TACAT--CTAAACAT  137

seq1  ACAAACTAAAGCAAGAGCTTTGCAATTGGCAATTTATACTCCTCTCTTTC  196
      || ||||||||| ||||| ||||||||||||| |||||   |||||||||
seq2  AC-AACTAAAGC-AGAGC-TTGCAATTGGCAA-TTATAACTCTCTCTTTC  183

seq1  TCTCCTCTCATCTCCATGTGCAT-ACATGTGTGTGTACTCTTTACTATTT  245
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCTCCTCTCATCTCCATGTGCATAACATGTGTGTGTACTCTTTACTATTT  233

seq1  ACTGA-GTGGATTCCCTTACTCACTAGTGAGTTGCTACTTATAACATCAC  294
      ||||| |||||||||  ||||||||||||||||||||| |||||||||||
seq2  ACTGAGGTGGATTCC--TACTCACTAGTGAGTTGCTAC-TATAACATCAC  280

seq1  AGTGTGAAAACACTAACATGAACAGCAATTACAGGCTTAATTTAGGGCCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAAAACACTAACATGAACAGCAATTACAGGCTTAATTTAGGGCCA  330

seq1  CAAATCTCCTGATAAAATAATAGATAAATTATAGGTAGGTAGGTAGGTAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCCTGATAAAATAATAGATAAATTATAGGTAGGTAGGTAGGTAG  380

seq1  GTAGGTAGGTAGGTAGGTAGGTAGATACTTGGTTACAGAAGTAGGTAGGT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTAGGTAGGTAGGTAGGTAGATACTTGGTTACAGAAGTAGGTAGGT  430

seq1  AGATGATAAATATTGTGCTCATTTATATATCCCGCTTATCTTATTCTTTA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATAAATATTGTGCTCATTTATATATCCCGCTTATCTTATTCTTTA  480

seq1  ACAGAAACTTTATAAAAAGCTTCCTAATCAAATGAGAAGATGAAGCACTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACTTTATAAAAAGCTTCCTAATCAAATGAGAAGATGAAGCACTC  530

seq1  ATAAAACCAAGCATATCATTTAATGGTTGTTTCAAGTATGTGAACTTGTT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACCAAGCATATCATTTAATGGTTGTTTCAAGTATGTGAACTTGTT  580

seq1  TTAGTGGTCCAAGTTCATTTCCTCCTGATTTATTGGATGAAATCCCTCTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGGTCCAAGTTCATTTCCTCCTGATTTATTGGATGAAATCCCTCTC  630

seq1  TCAGAGATTGTTTAGTATGCAAATGGGACACAATTATTTTACAACCATGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGATTGTTTAGTATGCAAATGGGACACAATTATTTTACAACCATGC  680

seq1  TTGCTTATGGAAAATCACTTTACGGATGTCACTTAAAATTGAGAGATTTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTATGGAAAATCACTTTACGGATGTCACTTAAAATTGAGAGATTTC  730

seq1  CATTAATGCTACAAAATATCTCAAAAGGGCAGTGGCTACTCATGTGTATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAATGCTACAAAATATCTCAAAAGGGCAGTGGCTACTCATGTGTATG  780

seq1  TCTGCAGTCCTTTATTTTACATAAATGTTTTGAGACTTGAATGTGAATGG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAGTCCTTTATTTTACATAAATGTTTTGAGACTTGAATGTGAATGG  830

seq1  AATCTTTTTCTACTCGCCTGTAACTGTACAACATCTATCCCCTCTAACAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCTACTCGCCTGTAACTGTACAACATCTATCCCCTCTAACAA  880

seq1  CTCAGCTAAACAATAGATAATAGATGACAAACTTAAGATAAATATTGAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAACAATAGATAATAGATGACAAACTTAAGATAAATATTGAGC  930

seq1  ATATTTATTTGGCCAGATAACTTATTCATTATTCAGAGACATTGGCTAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATTTGGCCAGATAACTTATTCATTATTCAGAGACATTGGCTAAA  980

seq1  AGAGTCATCTATATCTAAAATAGTTCCACACTCTAAGTCATAAGCAAGAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCATCTATATCTAAAATAGTTCCACACTCTAAGTCATAAGCAAGAG  1030

seq1  GAAGTTGGGAATCATTTGGAAGGGTCTGGCCAGTGATCCATCATCATTCC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGGGAATCATTTGGAAGGGTCTGGCCAGTGATCCATCATCATTCC  1080

seq1  TTGCCTACCCCTAGGCAAAGTCTGTGTATTTTAACTCTCATTTGGAAAGC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTACCCCTAGGCAAAGTCTGTGTATTTTAACTCTCATTTGGAAAGC  1130

seq1  AAAGGGAGAGAATTC  1159
      |||||||||||||||
seq2  AAAGGGAGAGAATTC  1145


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