BAC Information

Click to search

BAC

Clone NameB6Ng01-234I21
Chromosome7 (Build37)
Map Location 76,172,192 - 76,344,893
singlet/doubletdoublet
Overlap genenone
Upstream geneIgf1r, C330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4
Downstream geneLOC384741, EG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234I21.bB6Ng01-234I21.g
ACCGA046287GA046288
length1,1611,076
definitionB6Ng01-234I21.b B6Ng01-234I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,343,742 - 76,344,893)(76,172,192 - 76,173,278)
sequence
gaattctcaggatttgagattaatactaaactaatcttggttaatctctt
ctctaatagtaagtgacttaggagtaggagtgaattcaagttatcagaag
ttagcattgcttggctctcaggatactgtgcagaaattaatacataaata
taacttatttttttccatctcctgtaatatattttaagaatatccagagt
ctgaaataaagaaataagtgataatatgtattcaggacatatactattag
ctaggaatggtggtttactcctttaatcctagaactcaggggggcagagc
caagcaaagctctgtgaacttgaggtttccatagtaagttcaaggagagt
cagtgttatacagagagaacttacctttaaaaaagcaaaaacaaacaaaa
aaggcatagttgttggagctggagaggcagctcaatgtaagcatttaaga
tgtcatgttcactgctcttatagagggcccaaattcagttcccagcaccc
atgtcaagttgttcagaatctcctgtaacatcagctccagggaatccaat
gacttcttctgaactctatgagcaattataccccacatatgcacatatca
tacatgtatacataattaataaatattttaaaagccattggtgtacttac
tacgtgtattgtatgggccaaaaatttgcctgttgcagtttgcttttgtt
gctgggagtggataagagacattacactatatctcattgcttccactgct
agtggatatcagagaaaaattttgctatgctgattgaatgaaccggctct
ataggagtgactatccctaacaatattcattttggctgtgctagtctcag
agaagtatgggaataatgaaaagactgagagaaagaatcaagaatcacac
acacatggaaaaaaaagtgggtagatggatttttttttccatctatttcc
tggtcatgtttttcattattaaaaaaaaaaaaaaggaccacagattatac
agataaatgccaaatactacatctcctggaaaaggagccattcttattcc
caagaaacccttctgaatgtcaaccaagatcaagtgagggcaactgcttt
cctgaatccttcttggagggaaattcaatcaagccattgcctacctaggc
ttggagagatg

gaattctctaatacactctcatctccagtatttctgtatttctattattg
attgtattttcctgattttctttttgtatatctggtaattgcttgctgaa
ctgaagattttgtgaaaaatttcacattagtgtctggatatttttgtatt
tctataaatattcttggcctttgcaggttgttcttcctattgaatttgcc
tgagagtgtcctggatgtcttgtatctcaggaaagtttccagccaaggaa
atctggatggtttttcaccctggttagatatggagaaactgattcatttt
ggcttgtactcttggcctagcgccgtcccctcctgaagctaatttcactg
tgctgcctgggtatgctttgacttgtaggcataggtcactttgagttatt
catttcctggactgggtctgggaacatgacctgaggtcactcccagaact
gttcccagtgttgtgtctgtggtctttgttcttctttatccttgtactca
gaaccacatagctgataactcacatgaaacttttgctgatgcctagggcc
atctttacagctatcttgtcttagacactgctcactatcatctaagtgcc
ttggtcactctagagtcccataagtcctctgtcttaggagaccattagga
tctgacaggcttctctgtgctttctacccaggcaagggagaagctgtaga
tatacatcatcacctcacctcacttgttccttctctcaggaatctccctc
tgtccagcccatatctatcacccccaaactgaggcttcctacagtgtgtc
ctgttttatagtttttaaatgtgggacagtgaattccatcattgctattt
tatcttggcccaaatcagaaggcttgtgtcattctaaaaagatccttttt
gctgggttctctttgctactagacaaaagtatccacgtgatataatacca
accatggtatttggagaaactgtgtcagtgtcaagcacctgacttaatct
catgtacttataaaatcccaaacccttcagtatgtcacagcatcctgtgc
ttctgattctttcatctgtagagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76343742_76344893
seq2: B6Ng01-234I21.b_49_1209 (reverse)

seq1  CATCTCT-CAAGACTAGGTA-GCAATGGC-TGA-TGAATTTCCCTTCCAA  46
      ||||||| |||| ||||||| |||||||| ||| |||||||||| |||||
seq2  CATCTCTCCAAGCCTAGGTAGGCAATGGCTTGATTGAATTTCCC-TCCAA  49

seq1  GAAGGA-TCAGGAAAGCAGTGGCCCTCACTTGATCTTGGTTGACATTCAG  95
      |||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAGGATTCAGGAAAGCAGTTGCCCTCACTTGATCTTGGTTGACATTCAG  99

seq1  -AGGGTTTCTT-GGAAT-AGAATGGCTCCTTTT-CAGGAGATGTAGTATT  141
       |||||||||| ||||| ||||||||||||||| ||||||||||||||||
seq2  AAGGGTTTCTTGGGAATAAGAATGGCTCCTTTTCCAGGAGATGTAGTATT  149

seq1  TGCATTTTATCTGTAT-ATCTTGTGTTCTTTTTTTTTTTTTTAATAATGA  190
      ||   ||||||||||| ||||   || |||||||||||||||||||||||
seq2  TGGCATTTATCTGTATAATCTGTGGTCCTTTTTTTTTTTTTTAATAATGA  199

seq1  AAAACATGACCAGGAAATAGATGGAAAAAAAAATCCATCTACCCACTTTT  240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGACCAGGAAATAGATGGAAAAAAAAATCCATCTACCCACTTTT  249

seq1  TTTTCCATGTGTGTGTGATTCTTGATTCTTTCTCTCAGTCTTTTCATTAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATGTGTGTGTGATTCTTGATTCTTTCTCTCAGTCTTTTCATTAT  299

seq1  TCCCATACTTCTCTGAGACTAGCACAGCCAAAATGAATATTGTTAGGGAT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATACTTCTCTGAGACTAGCACAGCCAAAATGAATATTGTTAGGGAT  349

seq1  AGTCACTCCTATAGAGCCGGTTCATTCAATCAGCATAGCAAAATTTTTCT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTCCTATAGAGCCGGTTCATTCAATCAGCATAGCAAAATTTTTCT  399

seq1  CTGATATCCACTAGCAGTGGAAGCAATGAGATATAGTGTAATGTCTCTTA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATATCCACTAGCAGTGGAAGCAATGAGATATAGTGTAATGTCTCTTA  449

seq1  TCCACTCCCAGCAACAAAAGCAAACTGCAACAGGCAAATTTTTGGCCCAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCCCAGCAACAAAAGCAAACTGCAACAGGCAAATTTTTGGCCCAT  499

seq1  ACAATACACGTAGTAAGTACACCAATGGCTTTTAAAATATTTATTAATTA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATACACGTAGTAAGTACACCAATGGCTTTTAAAATATTTATTAATTA  549

seq1  TGTATACATGTATGATATGTGCATATGTGGGGTATAATTGCTCATAGAGT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATACATGTATGATATGTGCATATGTGGGGTATAATTGCTCATAGAGT  599

seq1  TCAGAAGAAGTCATTGGATTCCCTGGAGCTGATGTTACAGGAGATTCTGA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAAGTCATTGGATTCCCTGGAGCTGATGTTACAGGAGATTCTGA  649

seq1  ACAACTTGACATGGGTGCTGGGAACTGAATTTGGGCCCTCTATAAGAGCA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTGACATGGGTGCTGGGAACTGAATTTGGGCCCTCTATAAGAGCA  699

seq1  GTGAACATGACATCTTAAATGCTTACATTGAGCTGCCTCTCCAGCTCCAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACATGACATCTTAAATGCTTACATTGAGCTGCCTCTCCAGCTCCAA  749

seq1  CAACTATGCCTTTTTTGTTTGTTTTTGCTTTTTTAAAGGTAAGTTCTCTC  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATGCCTTTTTTGTTTGTTTTTGCTTTTTTAAAGGTAAGTTCTCTC  799

seq1  TGTATAACACTGACTCTCCTTGAACTTACTATGGAAACCTCAAGTTCACA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAACACTGACTCTCCTTGAACTTACTATGGAAACCTCAAGTTCACA  849

seq1  GAGCTTTGCTTGGCTCTGCCCCCCTGAGTTCTAGGATTAAAGGAGTAAAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTTGCTTGGCTCTGCCCCCCTGAGTTCTAGGATTAAAGGAGTAAAC  899

seq1  CACCATTCCTAGCTAATAGTATATGTCCTGAATACATATTATCACTTATT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTCCTAGCTAATAGTATATGTCCTGAATACATATTATCACTTATT  949

seq1  TCTTTATTTCAGACTCTGGATATTCTTAAAATATATTACAGGAGATGGAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTCAGACTCTGGATATTCTTAAAATATATTACAGGAGATGGAA  999

seq1  AAAAATAAGTTATATTTATGTATTAATTTCTGCACAGTATCCTGAGAGCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAGTTATATTTATGTATTAATTTCTGCACAGTATCCTGAGAGCC  1049

seq1  AAGCAATGCTAACTTCTGATAACTTGAATTCACTCCTACTCCTAAGTCAC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGCTAACTTCTGATAACTTGAATTCACTCCTACTCCTAAGTCAC  1099

seq1  TTACTATTAGAGAAGAGATTAACCAAGATTAGTTTAGTATTAATCTCAAA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTAGAGAAGAGATTAACCAAGATTAGTTTAGTATTAATCTCAAA  1149

seq1  TCCTGAGAATTC  1152
      ||||||||||||
seq2  TCCTGAGAATTC  1161


seq1: chr7_76172192_76173278
seq2: B6Ng01-234I21.g_66_1141

seq1  GAATTCTCTAATACACTCTCATCTCCAGTATTTCTGTATTTCTATTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAATACACTCTCATCTCCAGTATTTCTGTATTTCTATTATTG  50

seq1  ATTGTATTTTCCTGATTTTCTTTTTGTATATCTGGTAATTGCTTGCTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTTTCCTGATTTTCTTTTTGTATATCTGGTAATTGCTTGCTGAA  100

seq1  CTGAAGATTTTGTGAAAAATTTCACATTAGTGTCTGGATATTTTTGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATTTTGTGAAAAATTTCACATTAGTGTCTGGATATTTTTGTATT  150

seq1  TCTATAAATATTCTTGGCCTTTGCAGGTTGTTCTTCCTATTGAATTTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAATATTCTTGGCCTTTGCAGGTTGTTCTTCCTATTGAATTTGCC  200

seq1  TGAGAGTGTCCTGGATGTCTTGTATCTCAGGAAAGTTTCCAGCCAAGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTGTCCTGGATGTCTTGTATCTCAGGAAAGTTTCCAGCCAAGGAA  250

seq1  ATCTGGATGGTTTTTCACCCTGGTTAGATATGGAGAAACTGATTCATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGATGGTTTTTCACCCTGGTTAGATATGGAGAAACTGATTCATTTT  300

seq1  GGCTTGTACTCTTGGCCTAGCGCCGTCCCCTCCTGAAGCTAATTTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTACTCTTGGCCTAGCGCCGTCCCCTCCTGAAGCTAATTTCACTG  350

seq1  TGCTGCCTGGGTATGCTTTGACTTGTAGGCATAGGTCACTTTGAGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTGGGTATGCTTTGACTTGTAGGCATAGGTCACTTTGAGTTATT  400

seq1  CATTTCCTGGACTGGGTCTGGGAACATGACCTGAGGTCACTCCCAGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTGGACTGGGTCTGGGAACATGACCTGAGGTCACTCCCAGAACT  450

seq1  GTTCCCAGTGTTGTGTCTGTGGTCTTTGTTCTTCTTTATCCTTGTACTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAGTGTTGTGTCTGTGGTCTTTGTTCTTCTTTATCCTTGTACTCA  500

seq1  GAACCACATAGCTGATAACTCACATGAAACTTTTGCTGATGCCTAGGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCACATAGCTGATAACTCACATGAAACTTTTGCTGATGCCTAGGGCC  550

seq1  ATCTTTACAGCTATCTTGTCTTAGACACTGCTCACTATCATCTAAGTGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTACAGCTATCTTGTCTTAGACACTGCTCACTATCATCTAAGTGCC  600

seq1  TTGGTCACTCTAGAGTCCCATAAGTCCTCTGTCTTAGGAGACCATTAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCACTCTAGAGTCCCATAAGTCCTCTGTCTTAGGAGACCATTAGGA  650

seq1  TCTGACAGGCTTCTCTGTGCTTTCTACCCAGGCAAGGGAGAAGCTGTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAGGCTTCTCTGTGCTTTCTACCCAGGCAAGGGAGAAGCTGTAGA  700

seq1  TATACATCATCACCTCACCTCACTTGTTCCTTCTCTCAGGAATCTCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATCATCACCTCACCTCACTTGTTCCTTCTCTCAGGAATCTCCCTC  750

seq1  TGTCCAGCCCATATCTATCACCCCCAAACTGAGGCTTCCTACAGTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCCCATATCTATCACCCCCAAACTGAGGCTTCCTACAGTGTGTC  800

seq1  CTGTTTTATAGTTTTTAAATGTGGGACAGTGAATTCCATCATTGCTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTATAGTTTTTAAATGTGGGACAGTGAATTCCATCATTGCTATTT  850

seq1  TATCTTGGCCCAAATCAGAAGGCTTGTGTCATTCTAAAAAGATCC-TTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATCTTGGCCCAAATCAGAAGGCTTGTGTCATTCTAAAAAGATCCTTTTT  900

seq1  GCTGGGTTCTCTTTGCTACTAGACAAAAGTATCCAACGTGATATAAATAC  949
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  GCTGGGTTCTCTTTGCTACTAGACAAAAGTATCC-ACGTGATAT-AATAC  948

seq1  CAACCATGGTATTTTGGGAAGAAAACTGTGTCAGTGTCAAAGCACCTGAC  999
      |||||||||||||| | |    |||||||||||||||| |||||||||||
seq2  CAACCATGGTATTTGGAG----AAACTGTGTCAGTGTC-AAGCACCTGAC  993

seq1  TTTAAATCTCATTGTTACCTTATAAAATCCCAAACCCTTCAGTATGTCAC  1049
      ||  ||||||| |||   ||||||||||||||||||||||||||||||||
seq2  TT--AATCTCA-TGT--ACTTATAAAATCCCAAACCCTTCAGTATGTCAC  1038

seq1  AGCATCCTTGTGCTTCTGATTC-TTCATCTGTAGAGAGG  1087
      ||||||| |||||||||||||| ||||||||||||||||
seq2  AGCATCC-TGTGCTTCTGATTCTTTCATCTGTAGAGAGG  1076


| Home | SequenceCutter | Blast | Download |