BAC Information

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BAC

Clone NameB6Ng01-235B20
Chromosome7 (Build37)
Map Location 100,954,942 - 100,956,124
singlet/doubletsinglet
Overlap genenone
Upstream geneRab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298, LOC666783
Downstream geneEG638305, EG545982, EG666816
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235B20.bB6Ng01-235B20.g
ACCGA046677GA046678
length7151,171
definitionB6Ng01-235B20.b B6Ng01-235B20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttctatatctacacctcagtgtctcacccaggcatcaccagaga
agcttcctcctacagtagataggaattaatactagtagatgggaatacat
aactggacaatgttcagagagtgggagcttggacaactccataccaaatg
gacatttccatcaaatccccacctccaagatctcagggaatccagcagaa
gtggaggccaacgattctaaagagccagatgagcagaagatcaaggaaac
aaagccttctaaacacagaagcaccaatgcacacatgaagtcacaggtct
gcacaggcatgtgcttgatggggttccagttctgaaaggggacatggaca
caagtctacatttcttatcaaggaaatatcttcaactggtaaactctcaa
aataaaacattaggttttgccaggcaaatctcattgggtacaaaaaccat
tcttaaggtcatgccccagctcaggaattagatggtcaacacaaaataag
ctcagtgacatttttagaagatttttcttcaaaattctttgtcaagcttt
ttttttttttataatttcacaggtcacttgagtatatagtatgggttttg
gttgtgtttatatggtatttctgtaggtattaatgtttgtctatatgtgt
ttattgagcttgttttttgctttctcttctctttttttgtctgtttatat
ttttcttttatttat

gaattcacagcagcagaaatcactggtagtgagcctaccaatttccaagg
gataagttcaaaatcttatttggacagataactctggttaaactcaaact
agatgcatgagaaaacaaaaacaagaagtccttgaatgtgggaaatagtt
ttttggcaaagacaagggtgtaagggaagaagaactgtgcattttctata
tctacataattatcaaacaagaaaataaattaattataattatcttcata
ttcatttttattttattacataaaattgacttggagaaatgtttacctcc
aatgctaatgaagcaaaaagatgagatttatatctctgtttagaaactta
aaacatgagtcatatacaagcaaaaatatcaaatccgaaaaggcaaaaat
aaatgagattatgcacttcaatgctttcatatagttctcagcttcaacaa
cgaataaaactattggaactctgggaactcagaggccagcagatgacctg
agttgaggaaatgggaatgagatgtcaactacaggccagagtatataaga
caaagaagctgaacatagagaaaaagcacgtgttattaaaggtaactgtc
tgagaacagaatactgattaatataagaaggtatggaaattcaggaagca
gggctataataacctagtgaattaacagaagaaatatctgacagagagca
aggaatagtgtcaagtcccactagtcaaaatgaattcaagattcacaggg
caaaagaggacaattaaaaacatgttacaatagtaaggaataatcaatca
tggtcatttcaatttttatatgcatttaaaatgctatcagcagccagcac
tgaagcaccttgggcacagagtctgtgaacaccccaaagatccccatagg
actccccacgggatcttaggaactctggtgagtggaacacaactgctgtc
caatccaatcatgtgagacctgagacagcattaattagggaagcagaaaa
cccatctgacagggtcacaaatccctttcagtctgcaccagcacaagcac
acacatcttcggcatgagtctgccgacaccccgagttcccagagacttca
cagacttaggaacctctggtgagtgaacccacttctgccagaacatcatt
aatctggtcaccttttccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100954942_100956124
seq2: B6Ng01-235B20.g_67_1237 (reverse)

seq1  CAGGG--AAGGTGCCCAGATTTATGGTGTTCCTGGCAGAAGTTGTGTTCC  48
      |||||  |||||| ||||||| ||| |||| |||||||||| || ||| |
seq2  CAGGGAAAAGGTGACCAGATTAATGATGTT-CTGGCAGAAG-TGGGTT-C  47

seq1  ACTCACCAGAGG-TCCTAAGGTTCTGTGGAAAGTCCTCTGGGGAACTCGG  97
      |||||||||||| |||||||  ||||||  |||| |||| |||||||| |
seq2  ACTCACCAGAGGTTCCTAAG--TCTGTG--AAGT-CTCT-GGGAACTC-G  90

seq1  GGGTGTCCGCAGACTCATTGCCGAAGATGTGTTGGTGCTGGTGCTGGTGC  147
      ||||||| ||||||||| ||||||||||||||  ||||| ||||||||||
seq2  GGGTGTCGGCAGACTCA-TGCCGAAGATGTGT--GTGCTTGTGCTGGTGC  137

seq1  AGACTGGAAGGGATTTGTGACCCTGGTCAGGTTGGGTTTTCTGCTTCCCT  197
      |||||| ||||||||||||||||| |||| | ||||||||||||||||||
seq2  AGACTGAAAGGGATTTGTGACCCT-GTCA-GATGGGTTTTCTGCTTCCCT  185

seq1  AATTAATGCTGTCTCAGGTCTCACATGATTGGATTGGACAGCAGTTGTGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGCTGTCTCAGGTCTCACATGATTGGATTGGACAGCAGTTGTGT  235

seq1  TCCACTCACCAGAGTTCCTAAGATCCCGTGGGGAGTCCTATGGGGATCTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCACCAGAGTTCCTAAGATCCCGTGGGGAGTCCTATGGGGATCTT  285

seq1  TGGGGTGTTCACAGACTCTGTGCCCAAGGTGCTTCAGTGCTGGCTGCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGTTCACAGACTCTGTGCCCAAGGTGCTTCAGTGCTGGCTGCTGA  335

seq1  TAGCATTTTAAATGCATATAAAAATTGAAATGACCATGATTGATTATTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTTAAATGCATATAAAAATTGAAATGACCATGATTGATTATTCC  385

seq1  TTACTATTGTAACATGTTTTTAATTGTCCTCTTTTGCCCTGTGAATCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTATTGTAACATGTTTTTAATTGTCCTCTTTTGCCCTGTGAATCTTG  435

seq1  AATTCATTTTGACTAGTGGGACTTGACACTATTCCTTGCTCTCTGTCAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTTTGACTAGTGGGACTTGACACTATTCCTTGCTCTCTGTCAGA  485

seq1  TATTTCTTCTGTTAATTCACTAGGTTATTATAGCCCTGCTTCCTGAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTTCTGTTAATTCACTAGGTTATTATAGCCCTGCTTCCTGAATTT  535

seq1  CCATACCTTCTTATATTAATCAGTATTCTGTTCTCAGACAGTTACCTTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACCTTCTTATATTAATCAGTATTCTGTTCTCAGACAGTTACCTTTA  585

seq1  ATAACACGTGCTTTTTCTCTATGTTCAGCTTCTTTGTCTTATATACTCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACGTGCTTTTTCTCTATGTTCAGCTTCTTTGTCTTATATACTCTG  635

seq1  GCCTGTAGTTGACATCTCATTCCCATTTCCTCAACTCAGGTCATCTGCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTAGTTGACATCTCATTCCCATTTCCTCAACTCAGGTCATCTGCTG  685

seq1  GCCTCTGAGTTCCCAGAGTTCCAATAGTTTTATTCGTTGTTGAAGCTGAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGTTCCCAGAGTTCCAATAGTTTTATTCGTTGTTGAAGCTGAG  735

seq1  AACTATATGAAAGCATTGAAGTGCATAATCTCATTTATTTTTGCCTTTTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATGAAAGCATTGAAGTGCATAATCTCATTTATTTTTGCCTTTTC  785

seq1  GGATTTGATATTTTTGCTTGTATATGACTCATGTTTTAAGTTTCTAAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGATATTTTTGCTTGTATATGACTCATGTTTTAAGTTTCTAAACA  835

seq1  GAGATATAAATCTCATCTTTTTGCTTCATTAGCATTGGAGGTAAACATTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATAAATCTCATCTTTTTGCTTCATTAGCATTGGAGGTAAACATTT  885

seq1  CTCCAAGTCAATTTTATGTAATAAAATAAAAATGAATATGAAGATAATTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAGTCAATTTTATGTAATAAAATAAAAATGAATATGAAGATAATTA  935

seq1  TAATTAATTTATTTTCTTGTTTGATAATTATGTAGATATAGAAAATGCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAATTTATTTTCTTGTTTGATAATTATGTAGATATAGAAAATGCAC  985

seq1  AGTTCTTCTTCCCTTACACCCTTGTCTTTGCCAAAAAACTATTTCCCACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTCTTCCCTTACACCCTTGTCTTTGCCAAAAAACTATTTCCCACA  1035

seq1  TTCAAGGACTTCTTGTTTTTGTTTTCTCATGCATCTAGTTTGAGTTTAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGACTTCTTGTTTTTGTTTTCTCATGCATCTAGTTTGAGTTTAAC  1085

seq1  CAGAGTTATCTGTCCAAATAAGATTTTGAACTTATCCCTTGGAAATTGGT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTATCTGTCCAAATAAGATTTTGAACTTATCCCTTGGAAATTGGT  1135

seq1  AGGCTCACTACCAGTGATTTCTGCTGCTGTGAATTC  1183
      ||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACTACCAGTGATTTCTGCTGCTGTGAATTC  1171


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