BAC Information

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BAC

Clone NameB6Ng01-235D03
Chromosome7 (Build37)
Map Location 30,739,219 - 30,740,402
singlet/doubletsinglet
Overlap geneZfp74
Upstream geneActn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27
Downstream geneLOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235D03.bB6Ng01-235D03.g
ACCGA046735GA046736
length8361,171
definitionB6Ng01-235D03.b B6Ng01-235D03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattttgccgagcactgagaaccctgcggggtgtttggggactgg
ggctgaactgtaaattgcttgcacccgttgttttctgggaaatgtagttc
aaaccgaggagtccaagccgcagtgccttgtgggaaaaacaagccagggc
accaaatcctccttcgtgtaacccctgccacaacatctgctctaagccga
ttcacggagaattcctctgggaattctgtctagaaagggtcccaggaggt
cccggaaagaccaggaacctagaaatccaaaaagcggaatctgggtttca
ggctgccggtaaacctagatcttgtgagcgagatattctcttctctctct
ctctctctctctctctctctctctctctctctctcttttcattttggagt
cagatttgaaagatcatagcccagtcttgccaatcctcaagttgtaaatc
acaaccctgtcctcacccaaggggtgagttctcaaggctggccccagtcc
aggtcagtgggggctacaaactgcccccagccaccatcccactccccatt
tagtttctggtgtctcttggtccagtgctggaaacaaggggtaggatcca
tgtgatgtgatgtgtggcttgggaatgcctagtcttggctctgctgcact
gtgagggtgagtgctgaagctctttccagcacagcctaggaaaagagaag
tagcatttgctgcatatcatattcttctgagttgtgtattatacctaagt
tcctggctgctgttttgaacattagagtgtgactgtagctagccgaactg
ttatgacttctacagattgaaacctccaacctgaga
gaattctctgtggtgtctgattaggaaccaacactgtatgggagaagcta
tctgtggtgctgggatagacagaaaataaaagttaggatgggggtgggcc
tgtcaaacagaagctgggcgatttatctgagcttgaggccagtttgggct
acatgtcaagcgatggcaaattcaagaagtttatttgacagcaacaatat
tatgaaaggaaaagagaaacaaactattgcttagagttctatattctgtg
tgaaataaaataatgttgcttaaatactatgataaaggaactatgtacac
tatactatctatctaaagcaggggctgagagacagattaggcatcaagag
tacttgttgctcttgaagaggacccatgtttcattcccagaactctcagg
gagtggttcacaagcacaggccactccagtttcggggaatcggatgcccc
cttctggtctctctgtgtattgcatgcatgaactgcagacaaaatactca
aaacacgtcaagtagaaataaataaacctttaaaacaaacaaacaaacaa
caacaacaacaaaaaacccttgttcactaaagagtattatcaggacaata
aaaggacaaattactcctacagcaagggtggaaagtatttgtaaaaacgt
atatctaataacgtccccctccccagtggtgattgttttgttttgatgga
gagagaacggctaactggtacaagggtctagttgactagtaaatggctcc
gtttccttaggatctagttagtatgtagacattgctcagcaatggtgttt
acaatcctacgttaacagtccagtaacactgtcggtcagaacaaggagtc
tacgaagtatagacaaaagcatgtttctgacaaattggaagatagcaatg
aaacgctgcaagagaacacccagccatgattacaaagtggctgcaaattc
acacagttttaaatgtcactgaacttcaaggtctcttaactctataaact
ccaccaccctgatccccatagtctaagtctcacacacacgtatcacgtag
ctgctctgctgcctgctacagagttgtgactcgagacatcccatcataaa
gaagtagacatcctcggggaaaagctgatccaagtactaaacaaactcag
tctgccttcctttcctggctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30739219_30740402
seq2: B6Ng01-235D03.g_67_1237 (reverse)

seq1  GAGCCAGGAA--GAGAGCACGGCTGAGTTTGTTTAGTTCCCTTGGATCAG  48
      ||||||||||  ||  ||| | |||||||||||||||   ||||||||| 
seq2  GAGCCAGGAAAGGAAGGCA-GACTGAGTTTGTTTAGT--ACTTGGATCA-  46

seq1  GGCTCTCTCCCGAGATTGTCTACCTCTTTATGATGGGGATGGTCCTCCGG  98
       ||| |  ||||||  ||||||| |||||||||| ||||||    ||  |
seq2  -GCTTTTCCCCGAGGATGTCTACTTCTTTATGAT-GGGATG----TCTCG  90

seq1  AGTCACAAACTCTTGGTAGCAGGCAGAAGGAGGAGTTACGTGAATACGTG  148
      |||||| ||||||  ||||||||||| | ||| || |||||| |||||||
seq2  AGTCAC-AACTCT--GTAGCAGGCAGCA-GAGCAGCTACGTG-ATACGTG  135

seq1  TGTGTGAGAACTAGACTATGGGG-TCAGGGT-GTGGAGTTTATAGAGTTA  196
      |||||||||  |||||||||||| ||||||| ||||||||||||||||||
seq2  TGTGTGAGACTTAGACTATGGGGATCAGGGTGGTGGAGTTTATAGAGTTA  185

seq1  AGAGACCTTGAAGTTCAGTGACATTTAAAACTGTGTGAATTTGCAACCAC  246
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGAGACCTTGAAGTTCAGTGACATTTAAAACTGTGTGAATTTGCAGCCAC  235

seq1  TTTTGTAATCATGGCTGGGTGTTCTCTTGCAGCGTTTCATTGCTATCTTC  296
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTGTAATCATGGCTGGGTGTTCTCTTGCAGCGTTTCATTGCTATCTTC  284

seq1  CAATTTTGTCAGAAACATGCTTTTGTCTATACTTCGTAGACTCCTTGTTC  346
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAA-TTTGTCAGAAACATGCTTTTGTCTATACTTCGTAGACTCCTTGTTC  333

seq1  TGACCGACAGTGTTACTGGACTGTTAACGTAGGATTGTAAACACCATTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCGACAGTGTTACTGGACTGTTAACGTAGGATTGTAAACACCATTGC  383

seq1  TGAGCAATGTCTACATACTAACTAGATCCTAAGGAAACGGAGCCATTTAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATGTCTACATACTAACTAGATCCTAAGGAAACGGAGCCATTTAC  433

seq1  TAGTCAACTAGACCCTTGTACCAGTTAGCCGTTCTCTCTCCATCAAAACA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAACTAGACCCTTGTACCAGTTAGCCGTTCTCTCTCCATCAAAACA  483

seq1  AAACAATCACCACTGGGGAGGGGGACGTTATTAGATATACGTTTTTACAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCACCACTGGGGAGGGGGACGTTATTAGATATACGTTTTTACAA  533

seq1  ATACTTTCCACCCTTGCTGTAGGAGTAATTTGTCCTTTTATTGTCCTGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTTCCACCCTTGCTGTAGGAGTAATTTGTCCTTTTATTGTCCTGAT  583

seq1  AATACTCTTTAGTGAACAAGGGTTTTTTGTTGTTGTTGTTGTTTGTTTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTTTAGTGAACAAGGGTTTTTTGTTGTTGTTGTTGTTTGTTTGT  633

seq1  TTGTTTTAAAGGTTTATTTATTTCTACTTGACGTGTTTTGAGTATTTTGT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTAAAGGTTTATTTATTTCTACTTGACGTGTTTTGAGTATTTTGT  683

seq1  CTGCAGTTCATGCATGCAATACACAGAGAGACCAGAAGGGGGCATCCGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTCATGCATGCAATACACAGAGAGACCAGAAGGGGGCATCCGAT  733

seq1  TCCCCGAAACTGGAGTGGCCTGTGCTTGTGAACCACTCCCTGAGAGTTCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCGAAACTGGAGTGGCCTGTGCTTGTGAACCACTCCCTGAGAGTTCT  783

seq1  GGGAATGAAACATGGGTCCTCTTCAAGAGCAACAAGTACTCTTGATGCCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGAAACATGGGTCCTCTTCAAGAGCAACAAGTACTCTTGATGCCT  833

seq1  AATCTGTCTCTCAGCCCCTGCTTTAGATAGATAGTATAGTGTACATAGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTCTCTCAGCCCCTGCTTTAGATAGATAGTATAGTGTACATAGTT  883

seq1  CCTTTATCATAGTATTTAAGCAACATTATTTTATTTCACACAGAATATAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATCATAGTATTTAAGCAACATTATTTTATTTCACACAGAATATAG  933

seq1  AACTCTAAGCAATAGTTTGTTTCTCTTTTCCTTTCATAATATTGTTGCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAAGCAATAGTTTGTTTCTCTTTTCCTTTCATAATATTGTTGCTG  983

seq1  TCAAATAAACTTCTTGAATTTGCCATCGCTTGACATGTAGCCCAAACTGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAAACTTCTTGAATTTGCCATCGCTTGACATGTAGCCCAAACTGG  1033

seq1  CCTCAAGCTCAGATAAATCGCCCAGCTTCTGTTTGACAGGCCCACCCCCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGCTCAGATAAATCGCCCAGCTTCTGTTTGACAGGCCCACCCCCA  1083

seq1  TCCTAACTTTTATTTTCTGTCTATCCCAGCACCACAGATAGCTTCTCCCA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACTTTTATTTTCTGTCTATCCCAGCACCACAGATAGCTTCTCCCA  1133

seq1  TACAGTGTTGGTTCCTAATCAGACACCACAGAGAATTC  1184
      ||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTTGGTTCCTAATCAGACACCACAGAGAATTC  1171