BAC Information

Click to search

BAC

Clone NameB6Ng01-235P12
Chromosome7 (Build37)
Map Location 121,833,465 - 121,834,487
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca
Downstream geneLOC100043295, Calcb, Insc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235P12.b
ACCGA047310
length1,022
definitionB6Ng01-235P12.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctatgtttcccagttccaccacacaaactcagttattttcag
gtcacatttttaggattctataatcttagttaagtaatattctcagacat
tatagatttccgactaactaaatccaagcaataattgcagtaaaaatgtt
gatctgtaaaatgaatattaaaaataataacatcatgaaatatgaattaa
gcatttactatatgctagtcatcattctaaagtttttataaattgaatta
tttaaatcttattgagactcagagaggtcaaggcacgtatccaaagagga
tagttagtaaacaatgagcatgaacaccagccagtgctgctttgtgccaa
agcactaactcctttaaattgccaccagtctaaatatgaggtaaactacc
tacacagctctcctttacctaggttgtttttctatgtgaatagctgcatg
ttgcatccacactcttaccaaattttactacctaacacaatatagtccca
gacactgctgtgaattaggaaagtctacaaattaagaagtgtgacaaact
agaatatatttcacaaaggtaagtactggcatcaaaagccattaaacagt
gtacaggataagaagataatgaagtagggtaagttttctctgtgcttctt
gctcatgacaggccaagcaattatgatttgaaattttaagttcaaatcat
gaatcttaaagtttcatttcaaagaataactttattcacattgtttagaa
cttaagcaccgtacttctggaagcatttcatcaaagactatgaaggatgt
ttagagaagaccaagttttatattaggtaagagatgtgtttccttcagag
ctctgaaacctacctatcacttcattaccctgctcagtgctgaatgagaa
agattaaaaataaatccctcaaaatatttttttaataatattatttaact
cattttacatttccaatgctataccaaagtcccccatatccaccaccccc
acttccctgcccaccactcccc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121833465_121834487
seq2: B6Ng01-235P12.b_43_1064 (reverse)

seq1  GGGGAGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTT  50
      ||||||| ||||||||||| ||||||||| |||||||||||||||| |||
seq2  GGGGAGT-GGTGGGCAGGGAAGTGGGGGT-GGTGGATATGGGGGAC-TTT  47

seq1  GGTATAGCATTGGAAATGT-AAATGAGTTAAATAAATATTATTAAAAAAA  99
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GGTATAGCATTGGAAATGTAAAATGAGTTAAAT-AATATTATTAAAAAAA  96

seq1  TATTTTGAGGAATTTATTTTTAATCTTTCTCATTCAGCACTGAGCAGGGT  149
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGAGGGATTTATTTTTAATCTTTCTCATTCAGCACTGAGCAGGGT  146

seq1  AATGAAGTGATAGGTAGGTTTCAGAGCTCTGAAGGAAACACATCTCTTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGTGATAGGTAGGTTTCAGAGCTCTGAAGGAAACACATCTCTTAC  196

seq1  CTAATATAAAACTTGGTCTTCTCT-AACATCCTTCATAGTCTTTGATGAA  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTAATATAAAACTTGGTCTTCTCTAAACATCCTTCATAGTCTTTGATGAA  246

seq1  ATGCTTCCAGAAGTACGGTGCTTAAGTTCTAAACAATGTGAATAAAGTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCCAGAAGTACGGTGCTTAAGTTCTAAACAATGTGAATAAAGTTA  296

seq1  TTCTTTGAAATG-AACTTTAAGATTCATGATTTGAACTTAAAATTTCAAA  347
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCTTTGAAATGAAACTTTAAGATTCATGATTTGAACTTAAAATTTCAAA  346

seq1  TCATAATTGCTTGGCCTGTCATGAGCAAGAAGCACAGAGAAAACTTACCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTGCTTGGCCTGTCATGAGCAAGAAGCACAGAGAAAACTTACCC  396

seq1  TACTTCATTATCTTCTTATCCTGTACACTGTTTAATGGCTTTTGATGCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATTATCTTCTTATCCTGTACACTGTTTAATGGCTTTTGATGCCA  446

seq1  GTACTTACCTTTGTGAAATATATTCTAGTTTGTCACACTTCTTAATTTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTACCTTTGTGAAATATATTCTAGTTTGTCACACTTCTTAATTTGT  496

seq1  AGACTTTCCTAATTCACAGCAGTGTCTGGGACTATATTGTGTTAGGTAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCCTAATTCACAGCAGTGTCTGGGACTATATTGTGTTAGGTAGT  546

seq1  AAAATTTGGTAAGAGTGTGGATGCAACATGCAGCTATTCACATAGAAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTGGTAAGAGTGTGGATGCAACATGCAGCTATTCACATAGAAAAA  596

seq1  CAACCTAGGTAAAGGAGAGCTGTGTAGGTAGTTTACCTCATATTTAGACT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAGGTAAAGGAGAGCTGTGTAGGTAGTTTACCTCATATTTAGACT  646

seq1  GGTGGCAATTTAAAGGAGTTAGTGCTTTGGCACAAAGCAGCACTGGCTGG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAATTTAAAGGAGTTAGTGCTTTGGCACAAAGCAGCACTGGCTGG  696

seq1  TGTTCATGCTCATTGTTTACTAACTATACTCTTTGGATACGTGCCTTGAC  747
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TGTTCATGCTCATTGTTTACTAACTATCCTCTTTGGATACGTGCCTTGAC  746

seq1  CTCTCTGAGTCTCAATAAGATTTAAATAATTCAATTTATAAAAACTTTAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGAGTCTCAATAAGATTTAAATAATTCAATTTATAAAAACTTTAG  796

seq1  AATGATGACTAGCATATAGTAAATGCTTAATTAATATTTCATGATGTTAT  847
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AATGATGACTAGCATATAGTAAATGCTTAATTCATATTTCATGATGTTAT  846

seq1  TATTTTTAATATTCATTTTACAGAACAACATTTTTACTGCAATTATTGCT  897
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TATTTTTAATATTCATTTTACAGATCAACATTTTTACTGCAATTATTGCT  896

seq1  TGGATCTAGTTAGTCGGAAATCTATAATGTCTGAGAATATTACTTAACTA  947
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTTAGTTAGTCGGAAATCTATAATGTCTGAGAATATTACTTAACTA  946

seq1  AGATTATAGAATCATAAAAATGTGACCTGAAAATAACTGAGTTTGTGTGG  997
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGATTATAGAATCCTAAAAATGTGACCTGAAAATAACTGAGTTTGTGTGG  996

seq1  TGGAACTGGGAAACATAGCTGAATTC  1023
      ||||||||||||||||||||||||||
seq2  TGGAACTGGGAAACATAGCTGAATTC  1022