BAC Information

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BAC

Clone NameB6Ng01-236A11
Chromosome7 (Build37)
Map Location 27,427,551 - 27,428,681
singlet/doubletsinglet
Overlap genenone
Upstream geneBckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c, LOC100043195, Nlrp4a, Nlrp9a, V1re12
Downstream geneEG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236A11.bB6Ng01-236A11.g
ACCGA047352GA047353
length1,2181,135
definitionB6Ng01-236A11.b B6Ng01-236A11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaccatgataaaagcaatctacagcaaacca
gtagccaacatcaaagaaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacatag
tacttgaagtcctagccagaccaattggacaacaaaaggagatcaagggg
atacaaattagaaaagatgaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgatcctaaaaattccaccagagaacccctaagcc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaacaatataaaatatcttggtg
tgactctaacgaaggaagtgaaagatctgtatgataagaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgaaaaaatgtctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aatgaattagaaagggcaatctgcaaattcatctggaatatcaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaaactctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
ttgtactggtatattgacagacaagtagaccagtggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaacctttcagaggaagaagacagcattttcacaaatggtgctggca
caactggtagttatcatgtagaagatgcgaattgatccattcctatctcc
ttgtactaagtcaaatctaagtggatcaggaactctacataaaaccagag
acactgaaacttttagaggagaaagtgggaaagccttagatatgggccac
aggcaaactcctgatagaacaccaatggcttgtgctgtaacatgaaatga
caaatggaactcatgactgcaggctctgcaaggccaaagaactcggtaat
agtccaaggcaccctcag
gaattcagtgagaccttgctgcagtgaagtggagctccatcaagaaagac
acctaacattaactttagacttacacacaaaggtgaatgtgcatgtgcac
atccacacaaggtgagctcacatacattcaaacacacatacactcatgaa
tggacacaacacacacacacacacacacacacacaaatatatatatatat
atatatgaaaaagagtcttcactaagatgctgcagcgtcaattatcaata
aagcacctagacagatggcccatagactttatggagatatctggtgtttg
tattctaattgacagatttgctaatgggaaagttggcaaatggaaattaa
tacaacacaggaagactattccatttcccttgtattttactgagagaggg
ttacaaataaaactgatatcccaattatttttcagactacctcaccatgt
gttcttggataaatcactttctccaggagatgttcattcattagtaaaac
aaagtggtttgattggacaacacttttccaaatctagtttcaagataaca
caagaatcctggaggaaactttgcatttgttgaaacctccgctccttttt
ctttaaggagtttgtgtgaaggaaggagacagtgaagcattaggggtact
ggtgtgcaatctttcctggaatctctcatattctcagtagtgattttgct
aagttcttaaatgttcccataaagcaagtatggtgaccaagaatgtgctt
caagatgccagggaggagttcacaagtgcaggagaatataggaacatctt
cagaacatgtttggaccccttaaatggttagtgcttacaccagtgcactg
aaaacaacaatatctcaagacatcttgcagacgtgggtgactgtaggtga
tcatgtggttatacacaaacacacacacacagaggtggggggttgggggt
gcaacactgctgccctccacaatttcggctatgaaaaatcactacaagtt
gaatataacctgttctctcaggacccattccctttgggtgcttgattctt
ctcctaaaacaacttgtcctcctcattaggaaggtatgctgtgttcattg
gaagtgtagcacatgttggattgatctaaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_27427551_27428681
seq2: B6Ng01-236A11.g_63_1197

seq1  GAATTCAGTGAGACCTTGCTGCAGTGAAGTGGAGCTCCATCAAGAAAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAGACCTTGCTGCAGTGAAGTGGAGCTCCATCAAGAAAGAC  50

seq1  ACCTAACATTAACTTTAGACTTACACACAAAGGTGAATGTGCATGTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACATTAACTTTAGACTTACACACAAAGGTGAATGTGCATGTGCAC  100

seq1  ATCCACACAAGGTGAGCTCACATACATTCAAACACACATACACTCATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACACAAGGTGAGCTCACATACATTCAAACACACATACACTCATGAA  150

seq1  TGGACACAACACACACACACACACACACACACACAAATATATATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACACAACACACACACACACACACACACACACAAATATATATATATAT  200

seq1  ATATATGAAAAAGAGTCTTCACTAAGATGCTGCAGCGTCAATTATCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGAAAAAGAGTCTTCACTAAGATGCTGCAGCGTCAATTATCAATA  250

seq1  AAGCACCTAGACAGATGGCCCATAGACTTTATGGAGATATCTGGTGTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTAGACAGATGGCCCATAGACTTTATGGAGATATCTGGTGTTTG  300

seq1  TATTCTAATTGACAGATTTGCTAATGGGAAAGTTGGCAAATGGAAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAATTGACAGATTTGCTAATGGGAAAGTTGGCAAATGGAAATTAA  350

seq1  TACAACACAGGAAGACTATTCCATTTCCCTTGTATTTTACTGAGAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACAGGAAGACTATTCCATTTCCCTTGTATTTTACTGAGAGAGGG  400

seq1  TTACAAATAAAACTGATATCCCAATTATTTTTCAGACTACCTCACCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATAAAACTGATATCCCAATTATTTTTCAGACTACCTCACCATGT  450

seq1  GTTCTTGGATAAATCACTTTCTCCAGGAGATGTTCATTCATTAGTAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGATAAATCACTTTCTCCAGGAGATGTTCATTCATTAGTAAAAC  500

seq1  AAAGTGGTTTGATTGGACAACACTTTTCCAAATCTAGTTTCAAGATAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGGTTTGATTGGACAACACTTTTCCAAATCTAGTTTCAAGATAACA  550

seq1  CAAGAATCCTGGAGGAAACTTTGCATTTGTTGAAACCTCCGCTCCTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATCCTGGAGGAAACTTTGCATTTGTTGAAACCTCCGCTCCTTTTT  600

seq1  CTTTAAGGAGTTTGTGTGAAGGAAGGAGACAGTGAAGCATTAGGGGTACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGAGTTTGTGTGAAGGAAGGAGACAGTGAAGCATTAGGGGTACT  650

seq1  GGTGTGCAATCTTTCCTGGAATCTCTCATATTCTCAGTAGTGATTTTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGCAATCTTTCCTGGAATCTCTCATATTCTCAGTAGTGATTTTGCT  700

seq1  AAGTTCTTAAATGTTCCCATAAAGCAAGTATGGTGACCAAGAATGTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTTAAATGTTCCCATAAAGCAAGTATGGTGACCAAGAATGTGCTT  750

seq1  CAAGATGCCAGGGAGGAGTTCACAAGTGCAGGAGAATATAGGAACATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCCAGGGAGGAGTTCACAAGTGCAGGAGAATATAGGAACATCTT  800

seq1  CAGAACATGTTTGGACCCCTTAAATGGTTAGTGCTTACACCAGTGCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATGTTTGGACCCCTTAAATGGTTAGTGCTTACACCAGTGCACTG  850

seq1  AAAACAACAATATCTCAAGACATCTTGCAGACGTGGGTGACTGTAGGTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAATATCTCAAGACATCTTGCAGACGTGGGTGACTGTAGGTGA  900

seq1  TCATGTGGTTATACACAAACACACACACACAGAGGT-GGGGGTTGGGGGT  949
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCATGTGGTTATACACAAACACACACACACAGAGGTGGGGGGTTGGGGGT  950

seq1  GCAACACTGCTG-CCTCCACAATTTCGGGCTATGAAAAATCACTACAAGT  998
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  GCAACACTGCTGCCCTCCACAATTTC-GGCTATGAAAAATCACTACAAGT  999

seq1  TGAATATAACCTGTTCTCTCAGGACCCA-TCCCTTTGGGTGCTTGATTTC  1047
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  TGAATATAACCTGTTCTCTCAGGACCCATTCCCTTTGGGTGCTTGA-TTC  1048

seq1  TTCTCCTAAAACAACTTGT-CTCCTCATTTGGGAAGGTATGCTGTGTTCA  1096
      ||||||||||||||||||| ||||||| || |||||||||||||||||||
seq2  TTCTCCTAAAACAACTTGTCCTCCTCA-TTAGGAAGGTATGCTGTGTTCA  1097

seq1  TT-GAAGTGTAGGGACATG-TGGA-TGAGCAAAAAAAA-  1131
      || |||||||| | ||||| |||| ||| | ||||||| 
seq2  TTGGAAGTGTA-GCACATGTTGGATTGATCTAAAAAAAA  1135