BAC Information

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BAC

Clone NameB6Ng01-236N20
Chromosome7 (Build37)
Map Location 59,627,429 - 59,762,866
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
Downstream geneEG620782, LOC100040692, Gm1865, LOC100040718
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236N20.bB6Ng01-236N20.g
ACCGA047979GA047980
length1,130551
definitionB6Ng01-236N20.b B6Ng01-236N20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,761,736 - 59,762,866)(59,627,429 - 59,627,979)
sequence
gaattcaaacagagatcagaagtatatgtaagtttgacatgttgtttatt
tcagtgatgcagaaaatgagaggtagtcatgcattacagtcctttttagt
attttaatgggttcaggagagaccagggaatcagaaaatttgttttacca
tatattttcaggttaagaattggtttgcatgctaatacttctttgggctg
taaagatataaacataagtaacacttgggctaatatttttctaacttgga
aacaaattgtttgttcaataaaactctccattaagaaaatcactgtgaca
attcagagccaagaatataccagtgccttcatttttatctttgctttttt
cctgattgtgatttatgttacttacaatatgaatacaaattgagacaagg
tcactattgattactttactctattctgtactctgtcctggtctttctaa
tttctttgcaaggtggtattcacctaggtacaattttcttacagaaatat
ttactcatctggcttttccccttttcttggctttgtgtctttcatcattg
acaaccacactataagcactcccctagtactaagagttatcataaacctc
actttcactattataatactctttacttgtgactgtgatgattgatcttg
gttgtcaagtagactggatttggaaatatctaaggaataactttctgggc
aaaatgctgaatgatattcataattgtgttatatgaagttgtgatagtgc
ctttgctggaagccagataaaagcaaggtccatgagagttttgtgttttg
cctgctttcctttacatcttcttcacatcatgctggcaagttcatctact
ccattcatctcttgctaagagttcacctatctttgtttcttccactgctg
catctctcttttgctaatattaaactcagcatcttcaaccttcaaaggaa
gctaaagagcagtgactaaccagtaatcgtccaggccatcaacaattaga
ctgtgacttctgaggttttcattctcctggagtagtagaaccaagttctc
ttacctgccagtatgagagaacactgtgaactacccagaattgcacccat
cagaacacctatgaggtcatcttttgatgt

gaattctctcccatcccactgacttcactcaactgttgaaaggagaacac
gatggatgataggtgctttatttctgtgagcatcccacatcaaaagattg
tgtttcctttctcttgatggcttcaaaagctttataactgcttccagccc
acgctccctatgcacattccctttacacctcttgcttaccatcctcactg
aatttgctgaaaatcacttgacttctgaacttcagacttgacttcagact
ttccctctgaagtgcgaaaaatctcttctctccactgtgttttacccaga
ggctttcagtcttatcaccttgcaggttatcctgtaaaacgaaatgtcat
tttcattcaaactgaagagtttaaagttttaggacatccatccatacaca
cacacacacacacacacacacacacacacagagagagagagagagagaga
gagaaagagagagagagagagagagagagagagagagagagagagagaga
gagagaaagagagagagagagagggagagagggagagaggtggggggggg
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59761736_59762866
seq2: B6Ng01-236N20.b_46_1175 (reverse)

seq1  ACATTAAAAGATGA-CTCATTAGGTTGTCTGATGGGTGC-ATTCTGGGTA  48
      |||| ||||||||| |||| |||||  |||||||||||| ||||||||||
seq2  ACATCAAAAGATGACCTCA-TAGGTGTTCTGATGGGTGCAATTCTGGGTA  49

seq1  GTTCCACAGTG-TCTCTCATACTGGGCAGGT-AGAGAACTTGGTTCCTAC  96
      ||| ||||||| ||||||||||| ||||||| ||||||||||||| ||||
seq2  GTT-CACAGTGTTCTCTCATACT-GGCAGGTAAGAGAACTTGGTT-CTAC  96

seq1  TTACTCCAGGAGAATGAAAACCTCAGAAGTCACAGTCTAATTGTTGATGG  146
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TACTCCAGGAGAATGAAAACCTCAGAAGTCACAGTCTAATTGTTGATGG  145

seq1  CCTGGACGATTACTGGTTAGTCACTGCTCTTTAGCTTCCTTTGAAGGTTG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACGATTACTGGTTAGTCACTGCTCTTTAGCTTCCTTTGAAGGTTG  195

seq1  AAGATGCTGAGTTTAATATTAGCAAAAGAGAGATGCAGCAGTGGAAGAAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTGAGTTTAATATTAGCAAAAGAGAGATGCAGCAGTGGAAGAAA  245

seq1  CAAAGATAGGTGAACTCTTAGCAAGAGATGAATGGAGTAGATGAACTTGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATAGGTGAACTCTTAGCAAGAGATGAATGGAGTAGATGAACTTGC  295

seq1  CAGCATGATGTGAAGAAGATGTAAAGGAAAGCAGGCAAAACACAAAACTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGATGTGAAGAAGATGTAAAGGAAAGCAGGCAAAACACAAAACTC  345

seq1  TCATGGACCTTGCTTTTATCTGGCTTCCAGCAAAGGCACTATCACAACTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACCTTGCTTTTATCTGGCTTCCAGCAAAGGCACTATCACAACTT  395

seq1  CATATAACACAATTATGAATATCATTCAGCATTTTGCCCAGAAAGTTATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAACACAATTATGAATATCATTCAGCATTTTGCCCAGAAAGTTATT  445

seq1  CCTTAGATATTTCCAAATCCAGTCTACTTGACAACCAAGATCAATCATCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGATATTTCCAAATCCAGTCTACTTGACAACCAAGATCAATCATCA  495

seq1  CAGTCACAAGTAAAGAGTATTATAATAGTGAAAGTGAGGTTTATGATAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACAAGTAAAGAGTATTATAATAGTGAAAGTGAGGTTTATGATAAC  545

seq1  TCTTAGTACTAGGGGAGTGCTTATAGTGTGGTTGTCAATGATGAAAGACA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTACTAGGGGAGTGCTTATAGTGTGGTTGTCAATGATGAAAGACA  595

seq1  CAAAGCCAAGAAAAGGGGAAAAGCCAGATGAGTAAATATTTCTGTAAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAAGAAAAGGGGAAAAGCCAGATGAGTAAATATTTCTGTAAGAA  645

seq1  AATTGTACCTAGGTGAATACCACCTTGCAAAGAAATTAGAAAGACCAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTACCTAGGTGAATACCACCTTGCAAAGAAATTAGAAAGACCAGGA  695

seq1  CAGAGTACAGAATAGAGTAAAGTAATCAATAGTGACCTTGTCTCAATTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTACAGAATAGAGTAAAGTAATCAATAGTGACCTTGTCTCAATTTG  745

seq1  TATTCATATTGTAAGTAACATAAATCACAATCAGGAAAAAAGCAAAGATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATATTGTAAGTAACATAAATCACAATCAGGAAAAAAGCAAAGATA  795

seq1  AAAATGAAGGCACTGGTATATTCTTGGCTCTGAATTGTCACAGTGATTTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAGGCACTGGTATATTCTTGGCTCTGAATTGTCACAGTGATTTT  845

seq1  CTTAATGGAGAGTTTTATTGAACAAACAATTTGTTTCCAAGTTAGAAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGGAGAGTTTTATTGAACAAACAATTTGTTTCCAAGTTAGAAAAA  895

seq1  TATTAGCCCAAGTGTTACTTATGTTTATATCTTTACAGCCCAAAGAAGTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGCCCAAGTGTTACTTATGTTTATATCTTTACAGCCCAAAGAAGTA  945

seq1  TTAGCATGCAAACCAATTCTTAACCTGAAAATATATGGTAAAACAAATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATGCAAACCAATTCTTAACCTGAAAATATATGGTAAAACAAATTT  995

seq1  TCTGATTCCCTGGTCTCTCCTGAACCCATTAAAATACTAAAAAGGACTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCCCTGGTCTCTCCTGAACCCATTAAAATACTAAAAAGGACTGT  1045

seq1  AATGCATGACTACCTCTCATTTTCTGCATCACTGAAATAAACAACATGTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATGACTACCTCTCATTTTCTGCATCACTGAAATAAACAACATGTC  1095

seq1  AAACTTACATATACTTCTGATCTCTGTTTGAATTC  1131
      |||||||||||||||||||||||||||||||||||
seq2  AAACTTACATATACTTCTGATCTCTGTTTGAATTC  1130


seq1: chr7_59627429_59627979
seq2: B6Ng01-236N20.g_65_615

seq1  GAATTCTCTCCCATCCCACTGACTTCACTCAACTGTTGAAAGGAGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCATCCCACTGACTTCACTCAACTGTTGAAAGGAGAACAC  50

seq1  GATGGATGATAGGTGCTTTATTTCTGTGAGCATCCCACATCAAAAGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGATAGGTGCTTTATTTCTGTGAGCATCCCACATCAAAAGATTG  100

seq1  TGTTTCCTTTCTCTTGATGGCTTCAAAAGCTTTATAACTGCTTCCAGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTTTCTCTTGATGGCTTCAAAAGCTTTATAACTGCTTCCAGCCC  150

seq1  ACGCTCCCTATGCACATTCCCTTTACACCTCTTGCTTACCATCCTCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTCCCTATGCACATTCCCTTTACACCTCTTGCTTACCATCCTCACTG  200

seq1  AATTTGCTGAAAATCACTTGACTTCTGAACTTCAGACTTGACTTCAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTGAAAATCACTTGACTTCTGAACTTCAGACTTGACTTCAGACT  250

seq1  TTCCCTCTGAAGTGCGAAAAATCTCTTCTCTCCACTGTGTTTTACCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTGAAGTGCGAAAAATCTCTTCTCTCCACTGTGTTTTACCCAGA  300

seq1  GGCTTTCAGTCTTATCACCTTGCAGGTTATCCTGTAAAACGAAATGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCAGTCTTATCACCTTGCAGGTTATCCTGTAAAACGAAATGTCAT  350

seq1  TTTCATTCAAACTGAAGAGTTTAAAGTTTTAGGACATCCATCCATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTCAAACTGAAGAGTTTAAAGTTTTAGGACATCCATCCATACACA  400

seq1  CACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGA  450

seq1  GAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  500

seq1  GAGAGAAAGAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGGTGGGGGGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAAAGAGAGAGAGAGAGAGGGAGAGAGGGAGAGAGGTGGGGGGGGG  550

seq1  G  551
      |
seq2  G  551


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