BAC Information

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BAC

Clone NameB6Ng01-237G24
Chromosome7 (Build37)
Map Location 90,344,162 - 90,491,699
singlet/doubletdoublet
Overlap genenone
Upstream geneSh3gl3, Adamtsl3, 1700129I04Rik, Eftud1, LOC100038986, LOC619808, Rkhd3, LOC619909, A530021J07Rik
Downstream geneEG666160, Tmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237G24.bB6Ng01-237G24.g
ACCGA048395GA048396
length1,055334
definitionB6Ng01-237G24.b B6Ng01-237G24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,344,162 - 90,345,215)(90,491,367 - 90,491,699)
sequence
gaattccatacaacctggagccgacatggatggcgtcttgaaggcacttc
ctgtggctttcctaaaaatggacacaatgggtttctgcttttctaggccc
agaggcgtctgaggagaagcaacacaagccatcagcttgtcctgcgtgct
ctctgcgggagagcatgtggttggagacaggtggacatacaaaatggggg
cactaagtctttgtttcctactactgggttggtctctttctgacctgtac
gttggctctgagtgtgtggtctctgagcccctcatcatctgcacatctgc
atcaagaaaaggagcgtctttagttaacatggcacagctctgactgctaa
ccctaagcaagacggagttatcaaccgacagcccccagaacacacagcgc
gtccccgcatgctcctcgattctgtgaagcctccattccactgggcagcc
atgaactcagcaggtaaagcttctgcatgcgggacagaaaagggtgtgga
gtcggctattcttgacccagagctctctgtaagattaaatctctgctgtt
ttttttttttttttttttttataaacagaaagttggatccattccaccta
agcaataaatcatgaaatagacatgttaattgctattgtaaaagaggaac
ccagaatcactttgatgtgaggttaacagagcttctctctgtttatattt
cctttctatagatcaaacagttccacagatcccccccccccccttttgac
atccgcatgttttggatacacacgcacacacatacatgccccagggagaa
gtctaggtttctgatatccatttctcctggctcctttaggtagggattaa
ggaaatgtttgggaaactagcactttacacttttttgtatgccacacgag
aggttgtagactggcgctcccttagtttacatatgccaagaggtcagtgt
ttggctcaggtccaccatgtagggacttggaagaagggaagaccatctaa
tcccttcctccacattaggaggccacccacctttcctttagccttaagct
cactg
tttgagaagtggcaatgatggagagagaaaggagagtgtaagttttcttt
aaataagttcaccctgggccagagttatctcttaaatgtagatgagaata
gatactctttttttttgtctccctcctccataggctgaaaaatgaaacct
gatgctttcactctgtatctaatagtgggagtggtccaggttgttgtggt
tgtggtggtggtgatgatgatgatgacaatttaaaataaagtgtggtgtg
tacaatactctcatcagcatgcaggaagctcttcttgatcttgtatttga
ggcaatccatcgaaatgcaaatagaaaatgcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_90344162_90345215
seq2: B6Ng01-237G24.b_43_1097

seq1  GAATTCCATACAACCTGGAGCCGACATGGATGGCGTCTTGAAGGCACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATACAACCTGGAGCCGACATGGATGGCGTCTTGAAGGCACTTC  50

seq1  CTGTGGCTTTCCTAAAAATGGACACAATGGGTTTCTGCTTTTCTAGGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTTTCCTAAAAATGGACACAATGGGTTTCTGCTTTTCTAGGCCC  100

seq1  AGAGGCGTCTGAGGAGAAGCAACACAAGCCATCAGCTTGTCCTGCGTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCGTCTGAGGAGAAGCAACACAAGCCATCAGCTTGTCCTGCGTGCT  150

seq1  CTCTGCGGGAGAGCATGTGGTTGGAGACAGGTGGACATACAAAATGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCGGGAGAGCATGTGGTTGGAGACAGGTGGACATACAAAATGGGGG  200

seq1  CACTAAGTCTTTGTTTCCTACTACTGGGTTGGTCTCTTTCTGACCTGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTCTTTGTTTCCTACTACTGGGTTGGTCTCTTTCTGACCTGTAC  250

seq1  GTTGGCTCTGAGTGTGTGGTCTCTGAGCCCCTCATCATCTGCACATCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTCTGAGTGTGTGGTCTCTGAGCCCCTCATCATCTGCACATCTGC  300

seq1  ATCAAGAAAAGGAGCGTCTTTAGTTAACATGGCACAGCTCTGACTGCTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAAAAGGAGCGTCTTTAGTTAACATGGCACAGCTCTGACTGCTAA  350

seq1  CCCTAAGCAAGACGGAGTTATCAACCGACAGCCCCCAGAACACACAGCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGCAAGACGGAGTTATCAACCGACAGCCCCCAGAACACACAGCGC  400

seq1  GTCCCCGCATGCTCCTCGATTCTGTGAAGCCTCCATTCCACTGGGCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCGCATGCTCCTCGATTCTGTGAAGCCTCCATTCCACTGGGCAGCC  450

seq1  ATGAACTCAGCAGGTAAAGCTTCTGCATGCGGGACAGAAAAGGGTGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTCAGCAGGTAAAGCTTCTGCATGCGGGACAGAAAAGGGTGTGGA  500

seq1  GTCGGCTATTCTTGACCCAGAGCTCTCTGTAAGATTAAATCTCTGCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGGCTATTCTTGACCCAGAGCTCTCTGTAAGATTAAATCTCTGCTGTT  550

seq1  TTTTTTTTTTTTTTTTTTTTATAAACAGAAAGTTGGATCCATTCCACCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTATAAACAGAAAGTTGGATCCATTCCACCTA  600

seq1  AGCAATAAATCATGAAATAGACATGTTAATTGCTATTGTAAAAGAGGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAATCATGAAATAGACATGTTAATTGCTATTGTAAAAGAGGAAC  650

seq1  CCAGAATCACTTTGATGTGAGGTTAACAGAGCTTCTCTCTGTTTATATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATCACTTTGATGTGAGGTTAACAGAGCTTCTCTCTGTTTATATTT  700

seq1  CCTTTCTATAGATCAAACAGTTCCACAGATCCCCCCCCCCCCCTTTTGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTATAGATCAAACAGTTCCACAGATCCCCCCCCCCCCCTTTTGAC  750

seq1  ATCCGCATGTTTTGGATACACACGCACACACATACATGCCCCAGGGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGCATGTTTTGGATACACACGCACACACATACATGCCCCAGGGAGAA  800

seq1  GTCTAGGTTTCTGATATCCATTTCTCCTGGCTCCTTTAGGTAGGGATTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGGTTTCTGATATCCATTTCTCCTGGCTCCTTTAGGTAGGGATTAA  850

seq1  GGAAATGTTTGGGAAACTAGCACTTTACACTTTTTTGTATGCCACACGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTTTGGGAAACTAGCACTTTACACTTTTTTGTATGCCACACGAG  900

seq1  AGGTTGTAGACTGGCGCTCCCTTAGTTTACATATGCCAAGAGGTCAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTAGACTGGCGCTCCCTTAGTTTACATATGCCAAGAGGTCAGTGT  950

seq1  TTGGCTCAGGGTCACCATGTAGGGACTTGGGAAGAAGGGAAGACCATCTA  1000
      ||||||||||  |||||||||||||||| |||||||||||||||||||||
seq2  TTGGCTCAGGTCCACCATGTAGGGACTT-GGAAGAAGGGAAGACCATCTA  999

seq1  AT-CCTTCCT-CACATTTAGGGAGGCCACCCACCTTTCC-TTAG-CTTAA  1046
      || ||||||| ||||||   ||||||||||||||||||| |||| |||||
seq2  ATCCCTTCCTCCACATT--AGGAGGCCACCCACCTTTCCTTTAGCCTTAA  1047

seq1  GCTCACTG  1054
      ||||||||
seq2  GCTCACTG  1055

seq1: chr7_90491367_90491699
seq2: B6Ng01-237G24.g_69_402 (reverse)

seq1  AATGCATTTTCTCTTTGCTTTTC-CTGGATTGCCTCAAATACAAGATCAA  49
      |||||||||||| ||||| ||||  |||||||||||||||||||||||||
seq2  AATGCATTTTCTATTTGCATTTCGATGGATTGCCTCAAATACAAGATCAA  50

seq1  GAAGAGCTTCCTGCATGCTGATGAGTGTATTGTACACACCACACTTTATT  99
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAAGAGCTTCCTGCATGCTGATGAGAGTATTGTACACACCACACTTTATT  100

seq1  TTAAATTGTCATCATCATCATCACCACCACCACAACCACAACAACCTGGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGTCATCATCATCATCACCACCACCACAACCACAACAACCTGGA  150

seq1  CCACTCCCACTATTAGATACAGAGTGAAAGCATCAGGTTTCATTTTTCAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCCACTATTAGATACAGAGTGAAAGCATCAGGTTTCATTTTTCAG  200

seq1  CCTATGGAGGAGGGAGACAAAAAAAAAGAGTATCTATTCTCATCTACATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGAGGAGGGAGACAAAAAAAAAGAGTATCTATTCTCATCTACATT  250

seq1  TAAGAGATAACTCTGGCCCAGGGTGAACTTATTTAAAGAAAACTTACACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATAACTCTGGCCCAGGGTGAACTTATTTAAAGAAAACTTACACT  300

seq1  CTCCTTTCTCTCTCCATCATTGCCACTTCTCAAA  333
      ||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTCTCTCCATCATTGCCACTTCTCAAA  334