BAC Information

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BAC

Clone NameB6Ng01-237J12
Chromosome7 (Build37)
Map Location 91,648,638 - 91,771,083
singlet/doubletdoublet
Overlap geneLOC100039239, Fah, Zfand6
Upstream geneTmc3, Stard5, Il16, Phgdh-ps1, LOC666170, 1700026D08Rik, Mesdc1, Mesdc2, 9930013L23Rik, 2210412D01Rik, Arnt2
Downstream gene2610206C17Rik, EG620480, Olfr291, LOC666276, Olfr290, ENSMUSG00000070600, F830104D24Rik, LOC620641, EG620672, Vmn2r-ps68, EG620697, Vmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237J12.bB6Ng01-237J12.g
ACCGA048506GA048507
length1,1191,022
definitionB6Ng01-237J12.b B6Ng01-237J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,769,959 - 91,771,083)(91,648,638 - 91,649,663)
sequence
gaattcattaaataaatcacccataatgtatccagaagctacataaatat
aagaactgagactgtaaaaactctcaaggcaagtgtaaattttgtggcct
tagaactttcatagataagacatctaaagcagtagcaaccgaagaggata
gatggaatacttttgttttcatgaaaagaatgaaaaaacaacacagagaa
tgttttacactatctgtttaagaatggtggataaagaaataaaatttcct
cctggagatatagcttggtggtaaagcgtttgggcagcgtgcttgggatc
ctagtttaaatctgtgatagctataaaaagaaggaaagagtgaaagaaag
cagaataaggcaatccaatgaaaacatggttcagttcccagcatccacat
ggtgctcggccaccatccataatcctagttctagctggaacgacacaaac
gtgcacgtggtgcacatagtacatgcaggcaaaacacttaaatttagtat
gaatcttttaaaaatgtatgaatataataaaaaatttaatagaattttgg
aaattctcaaagaattaataagatgtttttaaaggaaagaaaaataggca
atggatctgaatagatatttttttcagagaagatgtacaaactgactgtc
agcaaataaaacaatgctctgcatcagtagtcaccagggaagtgcaatag
caaaccgatagagttaacaggtggcccccagcagagtgctgagacagtag
caataacaagtgttgttttggttgtggaagtcagacactagcacattatg
ggaattcagaatactatagatgatttggaaaacactctagagtttctcaa
aaaggtaaaggatagttatcagtgacctagcatcttcacatcttctgaag
aaatgaaagcacgtcattgcttgctggtgttcttcttgcctttcattgtg
tagcttttaggaattggacccaggtatcagtgtgccagcaagagccttac
ctgctgagctatgttgccaggcctaggatgatgtattccctagaaaatag
aaacatgacactgttcttttgaatgctagtatcagtgcttatgtgatttt
cctcctagaggtaattttt
gaattcctatgtgataattacagagcatttcataacatgctgcctccccc
cccacaattgtattagtcagtgttctcctgagaaacagaaacagaagcaa
cggaaaagagagatgatggattgggcaggtgtatggatggatagatgaca
gagaatatagaaaccaggccggataattacaaaggttaagattcaccact
ctttatcatttttaaattaaagacccagaaatagggatgacaaaatgccc
aaggccaaatgcctgagaattgatgaggtggaatgaattctgaaacaacc
aagttcaagtttcagggcagaggatccagtcaagtttgccctttagccct
attttgttctgcccaggccctcagtggatgagtcagtaccactcctatat
tgaaagagccatctgccttactcagcccacagccagaatcagtgtctcag
cactcccaaagttgatcagcctgggtgtctgtgggcctctcaggttggtg
cataaaactaaccatcattcagtcacatgctagctcttgccttgctcctg
cagccagaactgaacattaaaaaaaatcttatttttttcatccaagcaaa
gatatagtaacaaataaaataacttctgaaatacatgaaaaaaaatgggc
agcatggcaaattagcaatataaaaaagaataattagaaaataaataaac
attaaagtaagagcacaaagctgaatcagcaagcgtatactggaggcctg
gcactgttctctggttccatgggcaccaatgagttaattcatcaacctct
gaaggcaaggcctggtataacccacattttgtagacaaagtgagagctta
aagatccttgtctgagttcatgaagctaaataagaagcagagatgggatt
tgaacttaaggaagcagagtccacagtccaactttccaaaatgccactct
tctgcctgcagacctgctgactgtcacatttccttgccaatgaatgtcac
agtaagctgatactttcccaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_91769959_91771083
seq2: B6Ng01-237J12.b_49_1167 (reverse)

seq1  AAAAATTAACTTCTAGGA-GAAAATCACATTAGCACTGATACTAGCATTC  49
      ||||||| || ||||||| ||||||||||| |||||||||||||||||||
seq2  AAAAATT-ACCTCTAGGAGGAAAATCACATAAGCACTGATACTAGCATTC  49

seq1  AAAAGAAACAAGTGTCATGTTTCTTATTTTCTA-GGAATACCATCAATCC  98
      |||||||   ||||||||||||| ||||||||| |||||| |||| ||||
seq2  AAAAGAA--CAGTGTCATGTTTC-TATTTTCTAGGGAATA-CATC-ATCC  94

seq1  TAGGCCTGGCAACATAGCTCAGCAGGTAAGGCTCTTGCTGGCACACCTGA  148
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGGCCTGGCAACATAGCTCAGCAGGTAAGGCTCTTGCTGGCACA-CTGA  143

seq1  TACCCTGGGTCCAATTCCTAAAAGCTACACAATGAAAGGCAAGAAGAACA  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-CCTGGGTCCAATTCCTAAAAGCTACACAATGAAAGGCAAGAAGAACA  192

seq1  CCAGCAAGCAATGACGTGCTTTCATTTCTTCAGAAGATGTGAAGATGCTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGCAATGACGTGCTTTCATTTCTTCAGAAGATGTGAAGATGCTA  242

seq1  GGTCACCTGATAACTATCC-TTACCTTTTTGAGAAACTCTAGAGTGTTTT  297
      ||||| ||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGTCA-CTGATAACTATCCTTTACCTTTTTGAGAAACTCTAGAGTGTTTT  291

seq1  CCAAATCATCTATAGTATTCTGAATTCCCATAATGTGCTAGTGTCTGACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCATCTATAGTATTCTGAATTCCCATAATGTGCTAGTGTCTGACT  341

seq1  TCCACAACCAAAACAACACTTGTTATTGCTACTGTCTCAGCACTCTGCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAACCAAAACAACACTTGTTATTGCTACTGTCTCAGCACTCTGCTG  391

seq1  GGGGCCACCTGTTAACTCTATCGGTTTGCTATTGCACTTCCCTGGTGACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACCTGTTAACTCTATCGGTTTGCTATTGCACTTCCCTGGTGACT  441

seq1  ACTGATGCAGAGCATTGTTTTATTTGCTGACAGTCAGTTTGTACATCTTC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGCAGAGCATTGTTTTATTTGCTGACAGTCAGTTTGTACATCTTC  491

seq1  TCTGAAAAAAATATCTATTCAGATCCATTGCCTATTTTTCTTTCCTTTAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAAAATATCTATTCAGATCCATTGCCTATTTTTCTTTCCTTTAA  541

seq1  AAACATCTTATTAATTCTTTGAGAATTTCCAAAATTCTATTAAATTTTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTATTAATTCTTTGAGAATTTCCAAAATTCTATTAAATTTTTT  591

seq1  ATTATATTCATACATTTTTAAAAGATTCATACTAAATTTAAGTGTTTTGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCATACATTTTTAAAAGATTCATACTAAATTTAAGTGTTTTGC  641

seq1  CTGCATGTACTATGTGCACCACGTGCACGTTTGTGTCGTTCCAGCTAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTACTATGTGCACCACGTGCACGTTTGTGTCGTTCCAGCTAGAA  691

seq1  CTAGGATTATGGATGGTGGCCGAGCACCATGTGGATGCTGGGAACTGAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGATTATGGATGGTGGCCGAGCACCATGTGGATGCTGGGAACTGAAC  741

seq1  CATGTTTTCATTGGATTGCCTTATTCTGCTTTCTTTCACTCTTTCCTTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTTCATTGGATTGCCTTATTCTGCTTTCTTTCACTCTTTCCTTCT  791

seq1  TTTTATAGCTATCACAGATTTAAACTAGGATCCCAAGCACGCTGCCCAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAGCTATCACAGATTTAAACTAGGATCCCAAGCACGCTGCCCAAA  841

seq1  CGCTTTACCACCAAGCTATATCTCCAGGAGGAAATTTTATTTCTTTATCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTACCACCAAGCTATATCTCCAGGAGGAAATTTTATTTCTTTATCC  891

seq1  ACCATTCTTAAACAGATAGTGTAAAACATTCTCTGTGTTGTTTTTTCATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTCTTAAACAGATAGTGTAAAACATTCTCTGTGTTGTTTTTTCATT  941

seq1  CTTTTCATGAAAACAAAAGTATTCCATCTATCCTCTTCGGTTGCTACTGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATGAAAACAAAAGTATTCCATCTATCCTCTTCGGTTGCTACTGC  991

seq1  TTTAGATGTCTTATCTATGAAAGTTCTAAGGCCACAAAATTTACACTTGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATGTCTTATCTATGAAAGTTCTAAGGCCACAAAATTTACACTTGC  1041

seq1  CTTGAGAGTTTTTACAGTCTCAGTTCTTATATTTATGTAGCTTCTGGATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGAGTTTTTACAGTCTCAGTTCTTATATTTATGTAGCTTCTGGATA  1091

seq1  CATTATGGGTGATTTATTTAATGAATTC  1125
      ||||||||||||||||||||||||||||
seq2  CATTATGGGTGATTTATTTAATGAATTC  1119

seq1: chr7_91648638_91649663
seq2: B6Ng01-237J12.g_70_1091

seq1  GAATTCCTATGTGATAATTACAGAGCATTTCATAACATGCTGCCTCCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATGTGATAATTACAGAGCATTTCATAACATGCTGCCTCCCCC  50

seq1  CCCACAATTGTATTAGTCAGTGTTCTCCTGAGAAACAGAAACAGAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAATTGTATTAGTCAGTGTTCTCCTGAGAAACAGAAACAGAAGCAA  100

seq1  CGGAAAAGAGAGATGATGGATTGGGCAGGTGTATGGATGGATAGATGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAAGAGAGATGATGGATTGGGCAGGTGTATGGATGGATAGATGACA  150

seq1  GAGAATATAGAAACCAGGCCGGATAATTACAAAGGTTAAGATTCACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATAGAAACCAGGCCGGATAATTACAAAGGTTAAGATTCACCACT  200

seq1  CTTTATCATTTTTAAATTAAAGACCCAGAAATAGGGATGACAAAATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCATTTTTAAATTAAAGACCCAGAAATAGGGATGACAAAATGCCC  250

seq1  AAGGCCAAATGCCTGAGAATTGATGAGGTGGAATGAATTCTGAAACAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAAATGCCTGAGAATTGATGAGGTGGAATGAATTCTGAAACAACC  300

seq1  AAGTTCAAGTTTCAGGGCAGAGGATCCAGTCAAGTTTGCCCTTTAGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGTTTCAGGGCAGAGGATCCAGTCAAGTTTGCCCTTTAGCCCT  350

seq1  ATTTTGTTCTGCCCAGGCCCTCAGTGGATGAGTCAGTACCACTCCTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTCTGCCCAGGCCCTCAGTGGATGAGTCAGTACCACTCCTATAT  400

seq1  TGAAAGAGCCATCTGCCTTACTCAGCCCACAGCCAGAATCAGTGTCTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGCCATCTGCCTTACTCAGCCCACAGCCAGAATCAGTGTCTCAG  450

seq1  CACTCCCAAAGTTGATCAGCCTGGGTGTCTGTGGGCCTCTCAGGTTGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCAAAGTTGATCAGCCTGGGTGTCTGTGGGCCTCTCAGGTTGGTG  500

seq1  CATAAAACTAACCATCATTCAGTCACATGCTAGCTCTTGCCTTGCTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAACTAACCATCATTCAGTCACATGCTAGCTCTTGCCTTGCTCCTG  550

seq1  CAGCCAGAACTGAACATTAAAAAAAATCTTATTTTTTTCATCCAAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAACTGAACATTAAAAAAAATCTTATTTTTTTCATCCAAGCAAA  600

seq1  GATATAGTAACAAATAAAATAACTTCTGAAATACATGAAAAAAAATGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTAACAAATAAAATAACTTCTGAAATACATGAAAAAAAATGGGC  650

seq1  AGCATGGCAAATTAGCAATATAAAAAAGAATAATTAGAAAATAAATAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCAAATTAGCAATATAAAAAAGAATAATTAGAAAATAAATAAAC  700

seq1  ATTAAAGTAAGAGCACAAAGCTGAATCAGCAAGCGTATACTGGAGGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTAAGAGCACAAAGCTGAATCAGCAAGCGTATACTGGAGGCCTG  750

seq1  GCACTGTTCTCTGGTTCCATGGGCACCAATGAGTTAATTCATCAACCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGTTCTCTGGTTCCATGGGCACCAATGAGTTAATTCATCAACCTCT  800

seq1  GAAGGCAAGGCCTGGTATAACCCACATTTTGTAGACAAAGTGAGAGCTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCAAGGCCTGGTATAACCCACATTTTGTAGACAAAGTGAGAGCTTA  850

seq1  AAGATCCTTGTCTGAGTTCATGAAGCTAAATAAGAAGCAGAGATGGGATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCTTGTCTGAGTTCATGAAGCTAAATAAGAAGCAGAGATGGGATT  900

seq1  TGAACTTAAGGAAGCAGAGTCCACAGTCCAAACTTCCAAAATGCCACTCT  950
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  TGAACTTAAGGAAGCAGAGTCCACAGTCCAACTTTCCAAAATGCCACTCT  950

seq1  TCTGCCTGCAGACCTGCTGACTGTCACATTTCCTTGCCAATGAATGTCAC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCAGACCTGCTGACTGTCACATTTCCTTGCCAATGAATGTCAC  1000

seq1  AGTAAGCCTGAATTACTTTTCCCACA  1026
      |||||| ||||  ||| |||||||||
seq2  AGTAAG-CTGA--TAC-TTTCCCACA  1022