BAC Information

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BAC

Clone NameB6Ng01-237O05
Chromosome7 (Build37)
Map Location 67,241,404 - 67,242,587
singlet/doubletsinglet
Overlap geneSnrpn
Upstream geneLOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snurf
Downstream geneEG664849, LOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, D0Kist2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237O05.bB6Ng01-237O05.g
ACCGA048730GA048731
length1,175994
definitionB6Ng01-237O05.b B6Ng01-237O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagtaagacctataaacaaccaaacacaaaaaacaaagacaagg
ctcactcatgtgaatttatctctttgagaaagtcaccccacaaattattt
gtgcatgctcctttgcatatcttataagcttcatcaacatgaagagaata
gaggacagaatagattaagtgttcaaagaaattacttccaaattcaccag
ctttttgtgaatctgtagattaaaaaaaattaataaataaaaatacctaa
caacacagaagcagtataacaatatttaaaatagatcacattacaagatg
acagaacaaaggtttataattctgtaccactatgtatgctatatctctgt
ttgtaaagatacctcatgtttccacacattgactattcacacacctgaat
ttactctgtacacttactttcttaatgccacattggaatcccctttcctg
tattataagtatcaaagtgtcaaaacacgtatttacctgttcctcctatc
cctttagaaactgggaggtgcaaatcaccattatctgttgtgatttccct
ctgaaaaaaatctgcatgttaactctcaagtgcttttatcccttcccatc
attaattatattcacagcaaggcacaatataattttaattcctttaggaa
tattattattgtgcaacacccatataccaaaataaatgttctttttttct
gtctgcctttaatttccacacacctttaatccacaatactgtctgttctt
tgaaatattaatgttcaccctgtaagagaactgagcaaaattgacagagc
acattgaagctcaaagggaggggcactgcagccaatacaacacaggacag
gacaaaggaagccaggtcctaacctggtaattttctaaactgattcttca
aagactttaaatatataggataatgttctaatcccatcaagcttgcacta
cttaatgtgcacaaatcatatatatctataaagaaacaggggtcaaatgg
gagctgaccttgtgctgcattgccttgctgaccattcctagggtggatgt
gacagcatctttggctcagcaagacctgctgcactgattgactattccac
acctcccaaccccatttttgtgctagtgagcttcacagcctcattcacgc
aatgcctgcagtttgccaagctgca
gaattcttacctgaggaatactgaatggctgagaagcacctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattctggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatcccgcaattcctctcctgggc
atatatccagaagatgccccaaccagtaagaaggacacatgctccactat
gtttatagcagccttatttataatagccagaagctggaaagaactcagat
gcccctcaacaaaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctataaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaagtaacacaatcacgaa
agaactcaaatgatatgtactgactcataagtggatattagcccagaaac
ttagtatacccgagataagatacaatttgcaaaacacatgaaactgaaga
agaacaaagaccaaagtgtggacactttgccccttcttagaaataatggg
tttttaatggaaaaaaagcaaatacagcagacaaggggatatacttaagg
aaaacaattttggcatactcatttgcaattccaagagtatctgacctaag
tcttcagagttgttcagatcacaacctaagaaattaaaaatcatttaaag
tgaaattttattttgttgatatcctctttatttaccattctattcagctt
aggtttcatgaactctaaagcatggtttagaagttcttgggtaagaatct
gtagtcaaacctgtgcaaatatagtgattttccatccatacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67241404_67242587
seq2: B6Ng01-237O05.b_46_1220

seq1  GAATTCCAGTAAGACCTATAAACAACCAAACACAAAAAACAAAGACAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTAAGACCTATAAACAACCAAACACAAAAAACAAAGACAAGG  50

seq1  CTCACTCATGTGAATTTATCTCTTTGAGAAAGTCACCCCACAAATTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCATGTGAATTTATCTCTTTGAGAAAGTCACCCCACAAATTATTT  100

seq1  GTGCATGCTCCTTTGCATATCTTATAAGCTTCATCAACATGAAGAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCTCCTTTGCATATCTTATAAGCTTCATCAACATGAAGAGAATA  150

seq1  GAGGACAGAATAGATTAAGTGTTCAAAGAAATTACTTCCAAATTCACCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACAGAATAGATTAAGTGTTCAAAGAAATTACTTCCAAATTCACCAG  200

seq1  CTTTTTGTGAATCTGTAGATTAAAAAAAATTAATAAATAAAAATACCTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGAATCTGTAGATTAAAAAAAATTAATAAATAAAAATACCTAA  250

seq1  CAACACAGAAGCAGTATAACAATATTTAAAATAGATCACATTACAAGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGAAGCAGTATAACAATATTTAAAATAGATCACATTACAAGATG  300

seq1  ACAGAACAAAGGTTTATAATTCTGTACCACTATGTATGCTATATCTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACAAAGGTTTATAATTCTGTACCACTATGTATGCTATATCTCTGT  350

seq1  TTGTAAAGATACCTCATGTTTCCACACATTGACTATTCACACACCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAGATACCTCATGTTTCCACACATTGACTATTCACACACCTGAAT  400

seq1  TTACTCTGTACACTTACTTTCTTAATGCCACATTGGAATCCCCTTTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTGTACACTTACTTTCTTAATGCCACATTGGAATCCCCTTTCCTG  450

seq1  TATTATAAGTATCAAAGTGTCAAAACACGTATTTACCTGTTCCTCCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAGTATCAAAGTGTCAAAACACGTATTTACCTGTTCCTCCTATC  500

seq1  CCTTTAGAAACTGGGAGGTGCAAATCACCATTATCTGTTGTGATTTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAGAAACTGGGAGGTGCAAATCACCATTATCTGTTGTGATTTCCCT  550

seq1  CTGAAAAAAATCTGCATGTTAACTCTCAAGTGCTTTTATCCCTTCCCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAAAATCTGCATGTTAACTCTCAAGTGCTTTTATCCCTTCCCATC  600

seq1  ATTAATTATATTCACAGCAAGGCACAATATAATTTTAATTCCTTTAGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTATATTCACAGCAAGGCACAATATAATTTTAATTCCTTTAGGAA  650

seq1  TATTATTATTGTGCAACACCCATATACCAAAATAAATGTTCTTTTTTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTGTGCAACACCCATATACCAAAATAAATGTTCTTTTTTTCT  700

seq1  GTCTGCCTTTAATTTCCACACACCTTTAATCCACAATACTGTCTGTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCCTTTAATTTCCACACACCTTTAATCCACAATACTGTCTGTTCTT  750

seq1  TGAAATATTAATGTTCACCCTGTAAGAGAACTGAGCAAAATTGACAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTAATGTTCACCCTGTAAGAGAACTGAGCAAAATTGACAGAGC  800

seq1  ACATTGAAGGCTCAAAGGGAGGGGCACTGCAGCCAATACAACACAGGACA  850
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAA-GCTCAAAGGGAGGGGCACTGCAGCCAATACAACACAGGACA  849

seq1  GGACAAAGGAAGCCAGGTCCTAACCTGGTAATTTTCTAAACTGATTCTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGGAAGCCAGGTCCTAACCTGGTAATTTTCTAAACTGATTCTTC  899

seq1  AAAGACTTTAAATATATAGGATAATGTTCTAATCCCATCAAGCTTGCACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTTAAATATATAGGATAATGTTCTAATCCCATCAAGCTTGCACT  949

seq1  ACTTAATGTGCACAAATCATATATATCTATTAAAGAAACAAGGGGTCAAA  1000
      ||||||||||||||||||||||||||||| ||||||||| ||||||| ||
seq2  ACTTAATGTGCACAAATCATATATATCTA-TAAAGAAAC-AGGGGTC-AA  996

seq1  ATGGGAGCTGACCTTGGTTGCTGCATTGCCTTGCTGACCATTCCTAGGGT  1050
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  ATGGGAGCTGACCTTG--TGCTGCATTGCCTTGCTGACCATTCCTAGGGT  1044

seq1  GGATGTGACAGGCATCTTTGGCTCAGCAGGACCTGCTGCACTGAATTGAC  1100
      |||||||||| ||||||||||||||||| |||||||||||||| ||||||
seq2  GGATGTGACA-GCATCTTTGGCTCAGCAAGACCTGCTGCACTG-ATTGAC  1092

seq1  TAAT-CACA-CTCCCAACCCCCATTTTGTGCTAGTGAGCCTGCACAGCCC  1148
      || | |||| |||||||||||  ||||||||||||||| || ||||||| 
seq2  TATTCCACACCTCCCAACCCCATTTTTGTGCTAGTGAG-CTTCACAGCC-  1140

seq1  TCCAATCACGC-ATGCGTGCATGTTTGCCAGGCTGCA  1184
        || |||||| |||| |||| |||||||| ||||||
seq2  -TCATTCACGCAATGCCTGCA-GTTTGCCAAGCTGCA  1175