BAC Information

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BAC

Clone NameB6Ng01-240I22
Chromosome7 (Build37)
Map Location 56,276,325 - 56,377,741
singlet/doubletdoublet
Overlap genenone
Upstream geneMrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116, Zdhhc13, Csrp3, E2f8, LOC100040465
Downstream gene9130015G15Rik, 5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5, Nell1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240I22.bB6Ng01-240I22.g
ACCGA050696GA050697
length3901,101
definitionB6Ng01-240I22.b B6Ng01-240I22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(56,377,346 - 56,377,741)(56,276,325 - 56,277,436)
sequence
aaccagacttcattataataaatggattaagccagtctcagaaagacaat
gttttctctcttacacgattcctagatttaatatagatatgtaaagccat
gcatgtatgtaataaatgtaaaagtgaaactgtctagggagcaggggacc
taactgaaaggggaagaagggtgcaggtgggggtggggaggaatatactc
aatgcatattacatatgtatgtgaaaatatccatacccaacaagcgacag
gtgcaaagtatagacacaatgaaacaaataacaataaaataaactcaaca
ggaaaacagaattcagttgtaatgctctggaaaaactgtttcaaattaga
atttaagatacatagatacgcctggcagtggtggtgccgg
gaattccctgctccagagccctctgcaaagggctggcttctccaccatca
ctgtcttctttggttcagaaggagtacatacaggggcaatcttcctcagt
aaagaggaactttccagagctacacaacaggtggggacagctgtgcctgc
caacaaagctggctggccctgcacccctcatctgggtcccctttccactt
catcttcttttccactggggatgtccgagccttgacctgacccatgaatg
gttcccatttcagactggcctcattgtacatgcaacatgtttaaccagag
tcaagtgtaccgggcaccatgtgaagcacttgaaatatactttctcctca
ttccgactcccttggggagataattattatccctgtcttagtagtaatta
catagagtcccagagaggttgaccaacctacacaaggccacagagccttg
gttgagctgggatggaaacataaggatcgagatctacaatcttctaccct
ggccacagccccatgccagtatttccagtcactcctaggtacataatttt
cagcgttcctttagttaaaataaataaataaataaataaataaataaata
aataaataaatgaagggaaattaagagatgcttaaaggcagacaacaggt
ggagcagtagggagtagagctgctgttgggtgaagaggaccctggacctt
tcttcccttaacctgcaaactgtatgatggaacctgcttcgcagattccc
aacacaggagggccttttccatcagcaaatcactggatgcgccatactgg
gaagtcagtacaaaccttactagggtaggggtttctgtggagacacattt
gaggagtgtcacaatagagagtagggaacaaaagagggttggtttgtaat
agaatcgagggggtagtagagcctggtcaataggagagtagcttccactc
cacacttattggcttggatctggctctcatctcagcttggattctctctg
taagtggggtatctcgcatcaagctctctgtcccccttaggttgtgcggc
ttgaaatgctgctgctgcctcttagaaagaggtcagtatgaatagttctg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_56377346_56377741
seq2: B6Ng01-240I22.b_43_438 (reverse)

seq1  CCGGCACCACCACTGCCAGGCGTATCTATGTATCTTAAATTCTAATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCACCACCACTGCCAGGCGTATCTATGTATCTTAAATTCTAATTTGA  50

seq1  AACAGTTTTTCCAGAGCATTACAACTGAATTCTGTTTTCCTGTTGAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTTTTCCAGAGCATTACAACTGAATTCTGTTTTCCTGTTGAGTTT  100

seq1  ATTTTATTGTTATTTGTTTCATTGTGTCTATACTTTGCACCTGTCGCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGTTATTTGTTTCATTGTGTCTATACTTTGCACCTGTCGCTTG  150

seq1  TTGGGTATGGATATTTTCACATACATATGTAATATGCATTGAGTATATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTATGGATATTTTCACATACATATGTAATATGCATTGAGTATATTC  200

seq1  CTCCCCACCCCCACCTGCACCCTTCTTCCCCTTTCAGTTAGGTCCCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCACCCCCACCTGCACCCTTCTTCCCCTTTCAGTTAGGTCCCCTGC  250

seq1  TCCCTAGACAGTTTCACTTTTACATTTATTACATACATGCATGGCTTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAGACAGTTTCACTTTTACATTTATTACATACATGCATGGCTTTAC  300

seq1  ATATCTATATTAAATCTAGGAATCGTGTAAGAGAGAAAACATTGTCTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATATTAAATCTAGGAATCGTGTAAGAGAGAAAACATTGTCTTTC  350

seq1  TGAGACTGGCTTAATCCATTTATTATAATGAAGTCTGGTTGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACTGGCTTAATCCATTTATTATAATGAAGTCTGGTTGAATTC  396

seq1: chr7_56276325_56277436
seq2: B6Ng01-240I22.g_68_1168

seq1  GAATTCCCTGCTCCAGAGCCCTCTGCAAAGGGCTGGCTTCTCCACCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCTCCAGAGCCCTCTGCAAAGGGCTGGCTTCTCCACCATCA  50

seq1  CTGTCTTCTTTGGTTCAGAAGGAGTACATACAGGGGCAATCTTCCTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTCTTTGGTTCAGAAGGAGTACATACAGGGGCAATCTTCCTCAGT  100

seq1  AAAGAGGAACTTTCCAGAGCTACACAACAGGTGGGGACAGCTGTGCCTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAACTTTCCAGAGCTACACAACAGGTGGGGACAGCTGTGCCTGC  150

seq1  CAACAAAGCTGGCTGGCCCTGCACCCCTCATCTGGGTCCCCTTTCCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAAGCTGGCTGGCCCTGCACCCCTCATCTGGGTCCCCTTTCCACTT  200

seq1  CATCTTCTTTTCCACTGGGGATGTCCGAGCCTTGACCTGACCCATGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCTTTTCCACTGGGGATGTCCGAGCCTTGACCTGACCCATGAATG  250

seq1  GTTCCCATTTCAGACTGGCCTCATTGTACATGCAACATGTTTAACCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCATTTCAGACTGGCCTCATTGTACATGCAACATGTTTAACCAGAG  300

seq1  TCAAGTGTACCGGGCACCATGTGAAGCACTTGAAATATACTTTCTCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTGTACCGGGCACCATGTGAAGCACTTGAAATATACTTTCTCCTCA  350

seq1  TTCCGACTCCCTTGGGGAGATAATTATTATCCCTGTCTTAGTAGTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGACTCCCTTGGGGAGATAATTATTATCCCTGTCTTAGTAGTAATTA  400

seq1  CATAGAGTCCCAGAGAGGTTGACCAACCTACACAAGGCCACAGAGCCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGTCCCAGAGAGGTTGACCAACCTACACAAGGCCACAGAGCCTTG  450

seq1  GTTGAGCTGGGATGGAAACATAAGGATCGAGATCTACAATCTTCTACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGCTGGGATGGAAACATAAGGATCGAGATCTACAATCTTCTACCCT  500

seq1  GGCCACAGCCCCATGCCAGTATTTCCAGTCACTCCTAGGTACATAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAGCCCCATGCCAGTATTTCCAGTCACTCCTAGGTACATAATTTT  550

seq1  CAGCGTTCCTTTAGTTAAAATAAATAAATAAATAAATAAATAAATAAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTTCCTTTAGTTAAAATAAATAAATAAATAAATAAATAAATAAATA  600

seq1  AATAAATAAATGAAGGGAAATTAAGAGATGCTTAAAGGCAGACAACAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAATGAAGGGAAATTAAGAGATGCTTAAAGGCAGACAACAGGT  650

seq1  GGAGCAGTAGGGAGTAGAGCTGCTGTTGGGTGAAGAGGACCCTGGACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTAGGGAGTAGAGCTGCTGTTGGGTGAAGAGGACCCTGGACCTT  700

seq1  TCTTCCCTTAACCTGCAAACTGTATGATGGAACCTGCTTCGCAGATTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTTAACCTGCAAACTGTATGATGGAACCTGCTTCGCAGATTCCC  750

seq1  AACACAGGAGGGCCTTTTCCATCAGCAAATCACTGGATGCGCCATACTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAGGGCCTTTTCCATCAGCAAATCACTGGATGCGCCATACTGG  800

seq1  GAAGTCAGTACAAACCTTACTAGGGTAGGGGTTTCTGTGGAGACACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGTACAAACCTTACTAGGGTAGGGGTTTCTGTGGAGACACATTT  850

seq1  GAGGAGTGTCACAATAGAGAGTAGGGGAACAAAAGAGGGTTGGTTTGTAA  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GAGGAGTGTCACAATAGAGAGTA-GGGAACAAAAGAGGGTTGGTTTGTAA  899

seq1  TAGAATCGAGGGGGTAGTAGAGCCTGGTCAATAGGAGAGTAGGCTTCCAC  950
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TAGAATCGAGGGGGTAGTAGAGCCTGGTCAATAGGAGAGTA-GCTTCCAC  948

seq1  TCCACACTTATTTGGCTTGAATCTGGCTCTCATCTCAGGCTTGGATTCCT  1000
      |||||||||| |||||||| ||||||||||||||||| ||||||||| ||
seq2  TCCACACTTA-TTGGCTTGGATCTGGCTCTCATCTCA-GCTTGGATT-CT  995

seq1  CTTCTGTAAAGTGGGGTTATCTCGCATCAAGCTCTCTGTTCCCCCTTTAA  1050
      | ||||| |||||||| ||||||||||||||||||||| ||||||||  |
seq2  C-TCTGT-AAGTGGGG-TATCTCGCATCAAGCTCTCTG-TCCCCCTT--A  1039

seq1  GGTTGTGCGGGCTTGAAATGCTGCTGCTGCCTC-TAGAGAG-GGTCAGTA  1098
      |||||||| |||||||||||||||||||||||| |||| || ||||||| 
seq2  GGTTGTGC-GGCTTGAAATGCTGCTGCTGCCTCTTAGAAAGAGGTCAGT-  1087

seq1  ATGAATAGTTCTGA  1112
      ||||||||||||||
seq2  ATGAATAGTTCTGA  1101