BAC Information

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BAC

Clone NameB6Ng01-240M14
Chromosome7 (Build37)
Map Location 96,536,782 - 96,537,894
singlet/doubletsinglet
Overlap genenone
Upstream geneRab38, LOC100039924, LOC666598, EG621562, Tmem135, LOC100039969
Downstream geneFzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83, Sytl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240M14.bB6Ng01-240M14.g
ACCGA050864GA050865
length9431,089
definitionB6Ng01-240M14.b B6Ng01-240M14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctataactgataaactagttcagcaaagtggctggatataaaat
tacctcacagaaattagtagcctttctttatacaaataataaatgggctg
agaaggaagttagagaaacaatacccttcacaatagccacaaataatata
aattatcttgatgtaactctaaccaaacaagtgaaagacctgtttgacaa
gaacttcaagtctctgaagaaagaaattgaagaagctatcagaagatggg
aagatctcccatgctcacggattagtaaattgaacatagtaaaaatctta
ctaaaagcaatccccatcaaaattccaacagtttccaaagtgtccttgtg
gtatggtgaaacatctcttaggtatatgctcaggagtgatgtagctggat
aaaaaaaaaaagagatacgtgatgaggggccacactcctgacaccattaa
tgatagtctgttatacttgcaaacaggaacctagcataactgtcatcaga
aaggcttcccacagcaactgatggaaacaaatacagagacccacagtcaa
gcattaggtgaagcttggggaatcttactgaagaaggggaggaaggatca
taggagccagagtagtcaaggacacttcaagaaaacctacaaaaaaataa
actaatcttggcccatggagcccacaaagactgaaccaccaaccggggac
catgcattggattgaccaaggctctctacacataataacagttgttatgt
atgtctgactctgttgcctgcctttggaaccctttcccctgacttggctg
cctcatctagcctcaagagaagatacatctagccatactgcaccttgata
tgctgaggctggttgttatccatggtaggcttcccctttttctgaaaaga
aagaaggaggaagagtgtatgggagaggtgaaaaggaaggact
gaattccagaaagaactgtggagttaagaacttaagctcatgacctgggt
gttgacattttttttttttttaagtagacacatggacccattgattcatg
caatcaacacaaatgtgttgattcccctgctttgggtctggtattagtca
tgtgctgatggtacctcaagcaaacacaaagcagtgaacttctctccttt
cagtcagagaacttaagaaaaggtgcagccccgaagcttcatttctatct
ctggtgtcttgacctgtctgagcaattgacagtagtaaagcagggccctc
tactctcctttacaagcctcccccaccgttgtgtaaacagaggcagattt
ccctcccagtcctcattattttttaacctctgttcatctctttagttggc
gacattttctatctactcggcagaactgctgagataattaaaagtaatgt
aggttaagtgcctaacataaaccatgacagctactttagtaagaaatgga
acaagacacagaagttgtccaatacaaagtattaatttggcagctctttg
actccgatccaaaactcaaagagctgatgttccagaggaggactgttaaa
tggatatggggattaattatttcccctgacttccttctcagcttctgtca
caaaagccctgtgtatgcaagctttcctgttctctccgcagaactctaca
tgtgtctactcaggttagccacattctacctgctgaagttgcctgcacgc
acagccaggagtcagtctgtcgggacccacaagtcagccaactgctgtga
agcgatactgctgaagggaaatccttgatgggtcttgcaagagaactaca
agctgcaacctggattaacccaggctgtttatcagcctcagctgctcatc
cactctcttccaggcagctgggcaaaactccaggactgccactcccactg
cctaaaaggcaaggagcactgagattctgatcaggacatggccctttttc
cagagagggatagtgtgcttggacagttcccatcagttctcttctgagct
gagtgacatgaaagggacctgaatgtccatctacatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96536782_96537894
seq2: B6Ng01-240M14.g_67_1155

seq1  GAATTCCAGAAAGAACTGTGGAGTTAAGAACTTAAGCTCATGACCTGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGAACTGTGGAGTTAAGAACTTAAGCTCATGACCTGGGT  50

seq1  GTTGACATTTTTTTTTTTTTTAAGTAGACACATGGACCCATTGATTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATTTTTTTTTTTTTTAAGTAGACACATGGACCCATTGATTCATG  100

seq1  CAATCAACACAAATGTGTTGATTCCCCTGCTTTGGGTCTGGTATTAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAACACAAATGTGTTGATTCCCCTGCTTTGGGTCTGGTATTAGTCA  150

seq1  TGTGCTGATGGTACCTCAAGCAAACACAAAGCAGTGAACTTCTCTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGATGGTACCTCAAGCAAACACAAAGCAGTGAACTTCTCTCCTTT  200

seq1  CAGTCAGAGAACTTAAGAAAAGGTGCAGCCCCGAAGCTTCATTTCTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAGAACTTAAGAAAAGGTGCAGCCCCGAAGCTTCATTTCTATCT  250

seq1  CTGGTGTCTTGACCTGTCTGAGCAATTGACAGTAGTAAAGCAGGGCCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTCTTGACCTGTCTGAGCAATTGACAGTAGTAAAGCAGGGCCCTC  300

seq1  TACTCTCCTTTACAAGCCTCCCCCACCGTTGTGTAAACAGAGGCAGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCCTTTACAAGCCTCCCCCACCGTTGTGTAAACAGAGGCAGATTT  350

seq1  CCCTCCCAGTCCTCATTATTTTTTAACCTCTGTTCATCTCTTTAGTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCAGTCCTCATTATTTTTTAACCTCTGTTCATCTCTTTAGTTGGC  400

seq1  GACATTTTCTATCTACTCGGCAGAACTGCTGAGATAATTAAAAGTAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTTCTATCTACTCGGCAGAACTGCTGAGATAATTAAAAGTAATGT  450

seq1  AGGTTAAGTGCCTAACATAAACCATGACAGCTACTTTAGTAAGAAATGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAGTGCCTAACATAAACCATGACAGCTACTTTAGTAAGAAATGGA  500

seq1  ACAAGACACAGAAGTTGTCCAATACAAAGTATTAATTTGGCAGCTCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACACAGAAGTTGTCCAATACAAAGTATTAATTTGGCAGCTCTTTG  550

seq1  ACTCCGATCCAAAACTCAAAGAGCTGATGTTCCAGAGGAGGACTGTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGATCCAAAACTCAAAGAGCTGATGTTCCAGAGGAGGACTGTTAAA  600

seq1  TGGATATGGGGATTAATTATTTCCCCTGACTTCCTTCTCAGCTTCTGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATGGGGATTAATTATTTCCCCTGACTTCCTTCTCAGCTTCTGTCA  650

seq1  CAAAAGCCCTGTGTATGCAAGCTTTCCTGTTCTCTCCGCAGAACTCTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCCTGTGTATGCAAGCTTTCCTGTTCTCTCCGCAGAACTCTACA  700

seq1  TGTGTCTACTCAGGTTAGCCACATTCTACCTGCTGAAGTTGCCTGCACGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTACTCAGGTTAGCCACATTCTACCTGCTGAAGTTGCCTGCACGC  750

seq1  ACAGCCAGGAGTCAGGCTGTCGGGACCCACAAGTCAGCCAACTGCTGTGA  800
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGGAGTCAGTCTGTCGGGACCCACAAGTCAGCCAACTGCTGTGA  800

seq1  AGCGATACTGCTGAAGGGAAATCCTTGATGGGTCTTGCAAGAGAACTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGATACTGCTGAAGGGAAATCCTTGATGGGTCTTGCAAGAGAACTACA  850

seq1  AGCTGCAACCTGGATTAACCCAGGCTGTTTATCAGCCTCAGCTGCTCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAACCTGGATTAACCCAGGCTGTTTATCAGCCTCAGCTGCTCATC  900

seq1  CACTCTCTTCCAGGCAGCTGGGCAAAAACTCCAGGACTGCCACTCCCCAC  950
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CACTCTCTTCCAGGCAGCTGGGC-AAAACTCCAGGACTGCCACT-CCCAC  948

seq1  TGCCTAAAAGGGCCAAAGGGAGCACTGAGGATTCCTGATCAGGACATGGC  1000
      |||||||||||  |||  |||||||||| |||| ||||||||||||||||
seq2  TGCCTAAAAGG--CAA--GGAGCACTGA-GATT-CTGATCAGGACATGGC  992

seq1  CCTTTTTCCCAGAAGAGGGATTAAGTGTGCCTTGACAAAGTTTCCCATCC  1050
      ||||||| |||| ||||||||  ||||||| | ||||    ||||||| |
seq2  CCTTTTT-CCAG-AGAGGGAT--AGTGTGCTTGGACA---GTTCCCAT-C  1034

seq1  AGTTCTCTTCCTTGGAGGCTGAGGTGGACATGAAAAGGGACCTGAAATGT  1100
      ||||||||||  ||   ||||||   |||||| ||||||||||| |||||
seq2  AGTTCTCTTC--TG--AGCTGAG--TGACATG-AAAGGGACCTG-AATGT  1076

seq1  CCATCTACATCCT  1113
      |||||||||||||
seq2  CCATCTACATCCT  1089