BAC Information

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BAC

Clone NameB6Ng01-241B22
Chromosome7 (Build37)
Map Location 122,893,762 - 122,894,902
singlet/doubletsinglet
Overlap geneSox6
Upstream geneInsc, EG627967, LOC668472
Downstream geneLOC100042779, 1110006G14Rik, EG668479, LOC100043313, 1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241B22.bB6Ng01-241B22.g
ACCGA051117GA051118
length1,146776
definitionB6Ng01-241B22.b B6Ng01-241B22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaagtaagaagctaatggtatccagggaccgtgtagcttgc
tgaagaaaagatacaagcacagggactatccaagagtctcccagaaataa
acactgccccttccttttcctctaggtgtagcaatgtaggtaagttcaca
ctcagtccaaatctattccagaacatgtcagtagtactccctgtgtggac
cctgtttgcatactcctgagtgctccaccctgtaaccccgctgaccctcc
cctttctactgggcatccctgaagataggggaagcatggcgacatctgtt
cccattcacaccgattttaatttaccaaaagagctccgctattttcagag
cagactccagagcacaatgacagatttagggccttggctgaggttgcatt
tccagtgtgtcagcatttcctcctcacagagagtaaattccagggggtca
caacagaggaatcgctgaaattctagcttcagagaagacacttttcccac
cctacttattttgtcctaactggagccgccactgcgctgccctatctggt
gggcaccagtggtggcctgcagtaactggactaaagttatctcatcttaa
gcaaacgtggaggtcctttggacccttcctgtgaggttctccacacaatt
atctcgtccagagctgactgaaatgtaatagctgtcgcataacaatttta
taactacacatttataaaggactcatttttaaaacacagccacatgccct
gcctgtttcataatcggatcgcaggaacagttttaagttacagatattct
ctctaacctaagagttgcacagttacatgatttttttttatggagtgctt
tttgcaaacaatttaaatgcaagttaggaaagtcactcacagccacacca
cggcagttttcctggataatccagagattttcaaggcacaatatgaacag
caacttgagagaaacaatgcccaagttgtgttgtgattactcagacatga
gcagctgagcagagagacgggcaatggaatgtgtgcagcaatcagcttct
gttgactatcagatttgagacacttgggaaggtattaaggcattataaag
gaatgcctttatggaagcgagccagcctgttttatgtgcagctcac
gaattcaaaagctgctagaacattctaagaagttccaaatgttcttgttg
atgagatagatccctgtacactctgtcagtagaaggtcacggaaagtgtt
tgcatgagtggataaatatatttaattttgaaaacacacgattagattga
tgattaagaacaaggaagtgggcatggaggaatgattagtaagataatcg
aagtccaaacctcacctcaagtaacataaactaaagaatccccagtgaca
aatgtactttcttctctctctctctctctctctctctctctctctctctc
tctctctctctctctctctgtttcgtgtgtgtatgtgtgtgtacacagag
agctgtctatatctatattttgagagagtatgtctctctcgtgctctttc
tgtatatatttgtgtttttgtttttttttacatatcgtgtgcctgtgtag
aagggggggtgaggataccacacagactcagactcctctgggcgccttca
tttttatagaggcgtgagtgtcttatatagagatttatttagaactatta
caaaacatactgacagagagtggctatgtctctgtatgtctctagcgctg
gctgcccaagacaataccttggacagtcacaagtacacactcttcaatca
gaacggccgtgcgccgtctgtgtctgtgaacatacgcctggctcttctac
taaacatgacaaaatgacactttttccttctctgctcttttctcacaaga
tgaagtaaaaaaagacccagaagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_122893762_122894902
seq2: B6Ng01-241B22.b_46_1191

seq1  GAATTCCAGAAAGTAAGAAGCTAATGGTATCCAGGGACCGTGTAGCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAAGTAAGAAGCTAATGGTATCCAGGGACCGTGTAGCTTGC  50

seq1  TGAAGAAAAGATACAAGCACAGGGACTATCCAAGAGTCTCCCAGAAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAAGATACAAGCACAGGGACTATCCAAGAGTCTCCCAGAAATAA  100

seq1  ACACTGCCCCTTCCTTTTCCTCTAGGTGTAGCAATGTAGGTAAGTTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCCCTTCCTTTTCCTCTAGGTGTAGCAATGTAGGTAAGTTCACA  150

seq1  CTCAGTCCAAATCTATTCCAGAACATGTCAGTAGTACTCCCTGTGTGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTCCAAATCTATTCCAGAACATGTCAGTAGTACTCCCTGTGTGGAC  200

seq1  CCTGTTTGCATACTCCTGAGTGCTCCACCCTGTAACCCCGCTGACCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTGCATACTCCTGAGTGCTCCACCCTGTAACCCCGCTGACCCTCC  250

seq1  CCTTTCTACTGGGCATCCCTGAAGATAGGGGAAGCATGGCGACATCTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTACTGGGCATCCCTGAAGATAGGGGAAGCATGGCGACATCTGTT  300

seq1  CCCATTCACACCGATTTTAATTTACCAAAAGAGCTCCGCTATTTTCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCACACCGATTTTAATTTACCAAAAGAGCTCCGCTATTTTCAGAG  350

seq1  CAGACTCCAGAGCACAATGACAGATTTAGGGCCTTGGCTGAGGTTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCCAGAGCACAATGACAGATTTAGGGCCTTGGCTGAGGTTGCATT  400

seq1  TCCAGTGTGTCAGCATTTCCTCCTCACAGAGAGTAAATTCCAGGGGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGTGTCAGCATTTCCTCCTCACAGAGAGTAAATTCCAGGGGGTCA  450

seq1  CAACAGAGGAATCGCTGAAATTCTAGCTTCAGAGAAGACACTTTTCCCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGGAATCGCTGAAATTCTAGCTTCAGAGAAGACACTTTTCCCAC  500

seq1  CCTACTTATTTTGTCCTAACTGGAGCCGCCACTGCGCTGCCCTATCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTATTTTGTCCTAACTGGAGCCGCCACTGCGCTGCCCTATCTGGT  550

seq1  GGGCACCAGTGGTGGCCTGCAGTAACTGGACTAAAGTTATCTCATCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCAGTGGTGGCCTGCAGTAACTGGACTAAAGTTATCTCATCTTAA  600

seq1  GCAAACGTGGAGGTCCTTTGGACCCTTCCTGTGAGGTTCTCCACACAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACGTGGAGGTCCTTTGGACCCTTCCTGTGAGGTTCTCCACACAATT  650

seq1  ATCTCGTCCAGAGCTGACTGAAATGTAATAGCTGTCGCATAACAATTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGTCCAGAGCTGACTGAAATGTAATAGCTGTCGCATAACAATTTTA  700

seq1  TAACTACACATTTATAAAGGACTCATTTTTAAAACACAGCCACATGCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACACATTTATAAAGGACTCATTTTTAAAACACAGCCACATGCCCT  750

seq1  GCCTGTTTCATAATCGGATCGCAGGAACAGTTTTAAGTTACAGATATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTCATAATCGGATCGCAGGAACAGTTTTAAGTTACAGATATTCT  800

seq1  CTCTAACCTAAGAGTTGCACAGTTACATGATTTTTTTTTATGGAGTGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACCTAAGAGTTGCACAGTTACATGATTTTTTTTTATGGAGTGCTT  850

seq1  TTTGCAAACAATTTAAATGCAAGTTAGGAAAGTCACTCACAGCCACACCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAACAATTTAAATGCAAGTTAGGAAAGTCACTCACAGCCACACCA  900

seq1  CGGCAGTTTTCCTGGATAATCCAGAGATTTTCAAGGCACAATATGAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAGTTTTCCTGGATAATCCAGAGATTTTCAAGGCACAATATGAACAG  950

seq1  CAACTTGAGAGAAACAATGCCCAAGTTGTGTTGTGATTACTCAGACATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGAGAGAAACAATGCCCAAGTTGTGTTGTGATTACTCAGACATGA  1000

seq1  GCAGCTGAGCAGAGAAGACGGGCAATGGAATGTGTGCAGCAATCAGC-TC  1049
      |||||||||||||| |||||||||||||||||||||||||||||||| ||
seq2  GCAGCTGAGCAGAG-AGACGGGCAATGGAATGTGTGCAGCAATCAGCTTC  1049

seq1  TGTTGACTAATCAGAATTTGAGACACT--GGAAGGTAATAAGGGTATTAT  1097
      |||||||| ||||| ||||||||||||  |||||||| ||| || |||||
seq2  TGTTGACT-ATCAG-ATTTGAGACACTTGGGAAGGTATTAA-GGCATTAT  1096

seq1  AAA-GAATGGC-TTATTGAAG-GAG-CAG-CTG-TTTATGTGCAGCTCAC  1141
      ||| ||||| | |||| |||| ||| ||| ||| ||||||||||||||||
seq2  AAAGGAATGCCTTTATGGAAGCGAGCCAGCCTGTTTTATGTGCAGCTCAC  1146