BAC Information

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BAC

Clone NameB6Ng01-241D22
Chromosome7 (Build37)
Map Location 99,298,661 - 99,299,856
singlet/doubletsinglet
Overlap geneDlg2
Upstream genenone
Downstream geneCcdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241D22.bB6Ng01-241D22.g
ACCGA051211GA051212
length1,1841,179
definitionB6Ng01-241D22.b B6Ng01-241D22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgtccatgcatcaaattttgtgtaaataaataaaggtcacc
ccactaagggaaagttaagatatggtctctgtcaaacatcaggaagctcg
ctagacattatccatgctatgataatttattaaaacatcttaagaagctt
caagacttcctttctaatttcctatttgtgtcactatctgggacaaagct
ggactgagctggtaactccaaatttgggttctgggtgttcatggtcttct
ctagaaaaggccagcacaatggttggtccacaatggttgatccacattag
ctactggcataatgtttactgcagagaatgccatcggtttaaaaccactc
tgaggacagaacacaaagggtccatccaccattccatgattttgtaccaa
caggaactgctctagagaataagtgagatctcatagaagcagcgagggtg
acagacagtagcatgagtgaatatattgaacggagagaactcacactaaa
ttgaagtcccacaaccaaaaatcattaggaacagtgggacagcaaacata
ttggctaacctcccccacaaggtcacagcagtgttaattaaaagaaagcc
cagggtggtcaagcaagctttgggaagtgcttttagagcccccacccctg
tgctaactgctgttcactgtgggcacctgcccattccatttgcaatcctg
ggctcctgcatgcccttcattgtgaacacagcctctgttgttctcccctc
acctctccctttccagtcaggttccaggacacctcagagctgcttcctct
actgagcttcaagttgctaacgttttctcttctgaacttgcttctgcttt
ttctatacagttgctcaagacttttattttgcatcacgatgatttatgac
atttccccctttaggtcagaatctttctgcttctcttgtgtctggatgta
ttaatgcccaatacataactcatagctatcgattcatagataagcattgg
actcatcagtgaatgatgatgtgttttttaaagtatactgtctgggcttg
agaatgtctcagtgctcgaaaggcaactttcgatgactagattcattttc
ctaggccaaatacatagcctgcctcaaacatctgtactcagtttatgaga
atctatgcacccttcttggaaccttctcttatca
gaattctcacctgaggtaatactgaatggctgagaagcacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccccctctcaccagtcagaatggctaagatgtaaaattcaggtgagag
cagatactggcaaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtatggcggttcctc
agaaaattggacatagtactgccggaggatcccgcaatacctctcctggg
catatatccagaagatgttccaactggtaagaaggatacatgctccacta
tgttcataccagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatttacacaat
ggagtaaaatgtggtacatttacactcagctattaaaaagaatgaattta
tgaaattcctaggcaaatggatggacctggagggcatcatcctgagtgag
gtaacacattcacaaaagaactcacatgatatgcactcactgattagtgg
ttattagcccagaaacttaaaatacccaaggtataagatacaatttgtaa
aacacatgaaactcaagaagaatgaagaccaaagtgtggacactttgccc
cttctttaatttgtgaacaaaacacccatggaaggagttacagagacaga
gtttggagctgagatgaaaggatggaccatgtagagactgccatatccag
ggattcatcccataatcagcctccaaactcagataccttgcatatgccag
caagattttgctgaaaggaccctgatatagctgtctcttgtgagggtatg
ccagtgcctggcaaacacagaagtggatgctcacagtcagtattggattg
aacacaagggccccaatggagagtagagaaagtacccaggagctgatcgg
tctgcaccctataggtaggacacatatggactacagtaccccccccccag
aagcttcggtctcttagcctgcatattgtagcagaagatgcctagctgtc
atcatgggcaagagagatcattggttggtcactttatcgtgcctcagatt
acaaggggaatgtccagtggccagagagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_99298661_99299856
seq2: B6Ng01-241D22.b_45_1228

seq1  GAATTCCTCTGTCCATGCATCAAATTTTGTGTAAATAAATAAAGGTCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTGTCCATGCATCAAATTTTGTGTAAATAAATAAAGGTCACC  50

seq1  CCACTAAGGGAAAGTTAAGATATGGTCTCTGTCAAACATCAGGAAGCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAAGGGAAAGTTAAGATATGGTCTCTGTCAAACATCAGGAAGCTCG  100

seq1  CTAGACATTATCCATGCTATGATAATTTATTAAAACATCTTAAGAAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATTATCCATGCTATGATAATTTATTAAAACATCTTAAGAAGCTT  150

seq1  CAAGACTTCCTTTCTAATTTCCTATTTGTGTCACTATCTGGGACAAAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTCCTTTCTAATTTCCTATTTGTGTCACTATCTGGGACAAAGCT  200

seq1  GGACTGAGCTGGTAACTCCAAATTTGGGTTCTGGGTGTTCATGGTCTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGAGCTGGTAACTCCAAATTTGGGTTCTGGGTGTTCATGGTCTTCT  250

seq1  CTAGAAAAGGCCAGCACAATGGTTGGTCCACAATGGTTGATCCACATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAGGCCAGCACAATGGTTGGTCCACAATGGTTGATCCACATTAG  300

seq1  CTACTGGCATAATGTTTACTGCAGAGAATGCCATCGGTTTAAAACCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGCATAATGTTTACTGCAGAGAATGCCATCGGTTTAAAACCACTC  350

seq1  TGAGGACAGAACACAAAGGGTCCATCCACCATTCCATGATTTTGTACCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGACAGAACACAAAGGGTCCATCCACCATTCCATGATTTTGTACCAA  400

seq1  CAGGAACTGCTCTAGAGAATAAGTGAGATCTCATAGAAGCAGCGAGGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTGCTCTAGAGAATAAGTGAGATCTCATAGAAGCAGCGAGGGTG  450

seq1  ACAGACAGTAGCATGAGTGAATATATTGAACGGAGAGAACTCACACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTAGCATGAGTGAATATATTGAACGGAGAGAACTCACACTAAA  500

seq1  TTGAAGTCCCACAACCAAAAATCATTAGGAACAGTGGGACAGCAAACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGTCCCACAACCAAAAATCATTAGGAACAGTGGGACAGCAAACATA  550

seq1  TTGGCTAACCTCCCCCACAAGGTCACAGCAGTGTTAATTAAAAGAAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTAACCTCCCCCACAAGGTCACAGCAGTGTTAATTAAAAGAAAGCC  600

seq1  CAGGGTGGTCAAGCAAGCTTTGGGAAGTGCTTTTAGAGCCCCCACCCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGGTCAAGCAAGCTTTGGGAAGTGCTTTTAGAGCCCCCACCCCTG  650

seq1  TGCTAACTGCTGTTCACTGTGGGCACTTGCCCATTCCATTTGCAATCCTG  700
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGCTAACTGCTGTTCACTGTGGGCACCTGCCCATTCCATTTGCAATCCTG  700

seq1  GGCTCCTGCATGCCCTTCATTGTGAACACAGCCTCTGTTGTTCTCCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTGCATGCCCTTCATTGTGAACACAGCCTCTGTTGTTCTCCCCTC  750

seq1  ACCTCTCCCTTTCCAGTCAGGTTCCAGGACACCTCAGAGCTGCTTCCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTCCCTTTCCAGTCAGGTTCCAGGACACCTCAGAGCTGCTTCCTCT  800

seq1  ACTGAGCTTCAAGTTGCTAACGTTTTCTCTTCTGAACTTGCTTCTGCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTTCAAGTTGCTAACGTTTTCTCTTCTGAACTTGCTTCTGCTTT  850

seq1  TTCTATACAGTTGCTCAAGACTTTTATTTTGCATCACGATGATTTATGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATACAGTTGCTCAAGACTTTTATTTTGCATCACGATGATTTATGAC  900

seq1  ATTTCCCCCTTTAGGTCAGAATCTTTCTGCTTCTCTTGTGTCTGGAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTTCCCCCTTTAGGTCAGAATCTTTCTGCTTCTCTTGTGTCTGG-ATGT  949

seq1  ATTAAATGCCCAATACATAACTCATAGCTATCGATTAATAGATAAAGCAA  1000
      ||| |||||||||||||||||||||||||||||||| |||||| |||| |
seq2  ATT-AATGCCCAATACATAACTCATAGCTATCGATTCATAGAT-AAGC-A  996

seq1  TTGGAACTTCAATCAGTGAAAATGAATGAATGTGTTTTTTAAAGTATACT  1050
      |||| |||   |||||||  |||| ||| |||||||||||||||||||||
seq2  TTGG-ACT--CATCAGTG--AATG-ATG-ATGTGTTTTTTAAAGTATACT  1039

seq1  GTCTTGGGCCTGGAGAAATGTCTCAGTGCTCGAAA-GCACCTTTTCAGAT  1099
      ||||  || || ||| ||||||||||||||||||| ||| ||||   |||
seq2  GTCT--GGGCTTGAG-AATGTCTCAGTGCTCGAAAGGCAACTTT--CGAT  1084

seq1  GACTTAGATTCATTTT-CTAG--CACATACATAG-CTGCTCACAACCATC  1145
      ||| |||||||||||| ||||  || |||||||| |||| | ||| ||||
seq2  GAC-TAGATTCATTTTCCTAGGCCAAATACATAGCCTGC-CTCAAACATC  1132

seq1  TGTAACTCCAGTTATGAGAAATCTAATGCA-CTTTCT--GAACCTTCTC-  1191
      ||| ||||   ||||||| ||||| ||||| | ||||  |||||||||| 
seq2  TGT-ACTCAGTTTATGAG-AATCT-ATGCACCCTTCTTGGAACCTTCTCT  1179

seq1  TATCA  1196
      |||||
seq2  TATCA  1184