BAC Information

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BAC

Clone NameB6Ng01-242N12
Chromosome7 (Build37)
Map Location 23,816,296 - 23,817,403
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083
Downstream geneEG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242N12.bB6Ng01-242N12.g
ACCGA052381GA052382
length1,1201,173
definitionB6Ng01-242N12.b B6Ng01-242N12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctaaaattatatcagtgatcattaagctcttttacagtgggact
gccattaggtctttttctgatagtcaaaactgcaaagagaactctgccag
tttcccatgtgtcaccagttaattgctcttagatagtaaacagactttct
ccatctcaaagcacattccaagaagttgtaaaataattaaacaaaggtca
taaaagggaactaacgatttattataggtgctagaacagaagataaaata
ttgactgggtttatctatataaaacttcactaatcacttagttatggttt
taaaccttcagtgaacctgtggagctgagacaggtgatagatggttagcc
agataattactcccaatggatatgcctgtaaacattcattgctataaata
aacttctatttcaatttatgatttgattttttttgtgtgaacttgtgatg
aactttgtaacaggtgatcatgtattctgaaggatgtgtaagcactgagg
acaaagagaagagaatttttccctttccccctccctagaagaatttttcc
ttgctagaatattttccttttccccacttaggatctttctgcttttcccc
ttagatagctttcataggaaaatttttacaacttagtaataaactctata
accacttctctaagtgtccctttttcttcctgtgacttctgaccagcagg
ctaagttagagttcccgttgagatagaagaaagaccacattacttaaccc
cccactgtcaggctactggtgtcactctcctaagctagcagtcttttacc
ctcagaaagagaaaggaagtttttagaaccttttaaaagttatcagcatt
tcagtacagtcagcgagcttgaaagccctgagaccctcagactttaaaac
cattaccagagtcctactctgtgactccactactactctccctgggccag
gaggctcccagcactaatgggtattttctgataataatatgtgtaatagt
tccattactgtactacataccttggctgaaaaatacttcaaggacactgg
caaaccctcagtgcgtttggtaatgtgctgtctatcacatggatgccatt
ttccaacacctggaggagca
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttgatg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacatttacacaatggaatactactcagc
tattaaaaaaatgaatttattaaattcctaggcaaatggatggacctgga
gggtatcatcctgagtgaagtaacccaatcacaaaggaactcgcacaata
tgtactcactgataagtggatattagcccagaaacttaggatacccaaga
tataggatacaacttgccaaacgcatgaaattcaaaaagaacgaagacca
aagtgtggacactttaccctttcttagaaatgggaacaaaacacccatat
aaggagttacagagacaaaatttggagttgtgacaaaggatggaccatct
agtgattgccatatgtagggatccatcccataatcagcttccaaatgctg
acaccattgcatacactagcaagatttccctgaaaaggacccagatatag
ctctctcttgtgagactatgccggggcctaggaaacacagaagtggatga
tcacagtcagctattggatgggtcacacggcccctaatggaggagctaga
gaaattacccaagagctaaagggaactgcacctataggtggacacaatat
gactaaccagtacctggggagcgctttttctttagctgcatattgttatt
caaagatggcctagttcggccaatcactgcagagaagtcaatgaactgca
actttaattgcccagtcagaacgtcagggactaaaaggggattgggtggc
ctagcggcatctgtcgcacgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_23816296_23817403
seq2: B6Ng01-242N12.b_59_1165

seq1  TATATCAGTGATCATTAAGCTCTTTTACAGTGGGACTGCCATTAGGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAGTGATCATTAAGCTCTTTTACAGTGGGACTGCCATTAGGTCTT  50

seq1  TTTCTGATAGTCAAAACTGCAAAGAGAACTCTGCCAGTTTCCCATGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGATAGTCAAAACTGCAAAGAGAACTCTGCCAGTTTCCCATGTGTC  100

seq1  ACCAGTTAATTGCTCTTAGATAGTAAACAGACTTTCTCCATCTCAAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTAATTGCTCTTAGATAGTAAACAGACTTTCTCCATCTCAAAGCA  150

seq1  CATTCCAAGAAGTTGTAAAATAATTAAACAAAGGTCATAAAAGGGAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAAGAAGTTGTAAAATAATTAAACAAAGGTCATAAAAGGGAACTA  200

seq1  ACGATTTATTATAGGTGCTAGAACAGAAGATAAAATATTGACTGGGTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTTATTATAGGTGCTAGAACAGAAGATAAAATATTGACTGGGTTTA  250

seq1  TCTATATAAAACTTCACTAATCACTTAGTTATGGTTTTAAACCTTCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAAAACTTCACTAATCACTTAGTTATGGTTTTAAACCTTCAGTG  300

seq1  AACCTGTGGAGCTGAGACAGGTGATAGATGGTTAGCCAGATAATTACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGGAGCTGAGACAGGTGATAGATGGTTAGCCAGATAATTACTCC  350

seq1  CAATGGATATGCCTGTAAACATTCATTGCTATAAATAAACTTCTATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGATATGCCTGTAAACATTCATTGCTATAAATAAACTTCTATTTCA  400

seq1  ATTTATGATTTGATTTTTTTTGTGTGAACTTGTGATGAACTTTGTAACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGATTTGATTTTTTTTGTGTGAACTTGTGATGAACTTTGTAACAG  450

seq1  GTGATCATGTATTCTGAAGGATGTGTAAGCACTGAGGACAAAGAGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCATGTATTCTGAAGGATGTGTAAGCACTGAGGACAAAGAGAAGAG  500

seq1  AATTTTTCCCTTTCCCCCTCCCTAGAAGAATTTTTCCTTGCTAGAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCCCTTTCCCCCTCCCTAGAAGAATTTTTCCTTGCTAGAATATT  550

seq1  TTCCTTTTCCCCACTTAGGATCTTTCTGCTTTTCCCCTTAGATAGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTCCCCACTTAGGATCTTTCTGCTTTTCCCCTTAGATAGCTTTC  600

seq1  ATAGGAAAATTTTTACAACTTAGTAATAAACTCTATAACCACTTCTCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAAATTTTTACAACTTAGTAATAAACTCTATAACCACTTCTCTAA  650

seq1  GTGTCCCTTTTTCTTCCTGTGACTTCTGACCAGCAGGCTAAGTTAGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCTTTTTCTTCCTGTGACTTCTGACCAGCAGGCTAAGTTAGAGTT  700

seq1  CCCGTTGAGATAGAAGAAAGACCACATTACTTAACCCCCCACTGTCAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTGAGATAGAAGAAAGACCACATTACTTAACCCCCCACTGTCAGGC  750

seq1  TACTGGTGTCACTCTCCTAAGCTAGCAGTCTTTTACCCTCAGAAAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTGTCACTCTCCTAAGCTAGCAGTCTTTTACCCTCAGAAAGAGAA  800

seq1  AGGAAGTTTTTAGAACCTTTTAAAAGTTATCAGCATTTCAGTACAGTCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTTTTTAGAACCTTTTAAAAGTTATCAGCATTTCAGTACAGTCAG  850

seq1  CGAGCTTGAAAGCCCTGAGACCCTCAGACTTTAAAACCATTACCAGAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCTTGAAAGCCCTGAGACCCTCAGACTTTAAAACCATTACCAGAGTC  900

seq1  CTACTCTGTGACTCCACTACTACTCTCCCTGGGCCAGGAGGCTCCCAGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTGTGACTCCACTACTACTCTCCCTGGGCCAGGAGGCTCCCAGCA  950

seq1  CTAATGGGTATTTTTCTGATAATATATTGTGTAATAGTTCCATTACTGTA  1000
      |||||||||| |||||||||||||   |||||||||||||||||||||||
seq2  CTAATGGGTA-TTTTCTGATAATAATATGTGTAATAGTTCCATTACTGTA  999

seq1  CTACATACCTTGGTTGAAAAAATACTTCAAGGACACTGGCAAACCCTCAG  1050
      ||||||||||||| || |||||||||||||||||||||||||||||||||
seq2  CTACATACCTTGGCTG-AAAAATACTTCAAGGACACTGGCAAACCCTCAG  1048

seq1  TGCGTTTGGTAATGTGCTGTTCTATCACATGGTTGCCATTTTTCAACAC-  1099
      ||||||||||||||||||| |||||||||||| ||||||||| |||||| 
seq2  TGCGTTTGGTAATGTGCTG-TCTATCACATGGATGCCATTTTCCAACACC  1097

seq1  -TGAGGAGCA  1108
        ||||||||
seq2  TGGAGGAGCA  1107