BAC Information

Click to search

BAC

Clone NameB6Ng01-242O03
Chromosome7 (Build37)
Map Location 31,844,020 - 31,844,753
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1
Downstream geneLgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242O03.bB6Ng01-242O03.g
ACCGA052411GA052412
length1,224735
definitionB6Ng01-242O03.b B6Ng01-242O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatctttcttcatctccaggtaaagttttaacaccctattatgaa
actgttgctgtattaatgcagaattgtaggttagaatcatgaaagtattt
tgcaaaagaacctgatgaaatatttattccttattctgaacagcaattaa
attggttattgcaggatagtgatatttggcctattgtatgtgcaaacttt
tcagggaaaataaataatcattatccaaaagacaagttgttacaatttgc
ctctatatatgtttttgtatttcctataaatttatgtatgcaacccatag
gaatgcgcttactgtatttacggagagctcatgtaatgggaaggcagcat
atgtgattggatcacatgtgcattttcttgagtttcccccacttcagcac
aaataattgaaatatgtgcagtagtctctgtttttgaaatgttgaaaaat
caagctattaatttgtatactgatagacaatatatagctcatggtttaca
attgcttgaaactgttccttttttagatatgctaattcttaaatttgtga
ttatttatgcaaatacaactcaatttaaaagaatgtactattccttaaat
ttataggacatttaagagctcatcctggcccttccagtcccgctagcaac
ggggtagcaagggcacagagtcggctgacacccacaagctacccacaaga
cccaccacaggatcttaagacctctggtgagtggaacacagctgctactc
caatccaatcacatgggacatgagactgcagtaattagggaagcagaaaa
cccggcctgatcaggggcacaagtcccttccggtccatgccagtacaggg
gtaccttgggcgtggagtctgcggacatccgtaaggtatacacaagaccc
tccacaggatcttaagacctctgtgagtggatcacaacttctgccaggag
acagattcgaacaccagatatctgggcacctttccctgcagaggagagcc
tacctgcagagagtactcctgaacactgaaactcaagcgagaagctagtt
ctcccaggttcttgctgatagagctaacaataaacacttgaagaaacagg
attctaaccagagaccacttaaaacaggctaaactccgagaatataccga
aatggccaaaggcaatgttagatctttacttacgaaaggcaagcagcttt
catcatctctactgagaaagctag
gaattccaacctccaaggagaggacacagaacaatacggaggggccctga
gccaacgtcctggggctgtaagttagtcatgagaacgacattgaagcttt
aggacgaagctcgatagatttgatgtggaagagagaggtggcattagtgt
ttgtatccagtcttggatttcatagagttaattacaagggatcttctgga
ggaggtctggctttggggcagggcagctgtcctaccgatggtgaccacca
gggggagcagctggcctggtgctggcctggtggtgctttggtgagtgggt
ggaccacaccctccaagagaaggggctggccaggaacagctaggatatcc
cccatcccccagtggcttctcctcttagccctcccatctgcagtctgcag
agccatctggtctccaccctggggacatccttcccactctccccaactgg
ggttgagtggggactctgatgagggggttggttggaagtgcctagggtgg
cagccttggcagccccgccccctcaaaggccattcaattcttttcctggg
ccttttcttctgatggcctctgacctcctccttcctacccttctgctagg
cacatcccaggccacagcaagtgagatcagtgtgggaggacacccagaaa
gtactggaaacttgaaacagggaagggaagtgagagttaggacagtcaga
cagacagaccatcacacacacacacacacacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_31844020_31844753
seq2: B6Ng01-242O03.g_68_801

seq1  GAATTCCAACCTCCAAGGAGAGGACACAGAACAATACGGAGGGGCCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACCTCCAAGGAGAGGACACAGAACAATACGGAGGGGCCCTGA  50

seq1  GCCAACGTCCTGGGGCTGTAAGTTAGTCATGAGAACGACATTGAAGCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACGTCCTGGGGCTGTAAGTTAGTCATGAGAACGACATTGAAGCTTT  100

seq1  AGGACGAAGCTCGATAGATTTGATGTGGAAGAGAGAGGTGGCATTAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGAAGCTCGATAGATTTGATGTGGAAGAGAGAGGTGGCATTAGTGT  150

seq1  TTGTATCCAGTCTTGGATTTCATAGAGTTAATTACAAGGGATCTTCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCCAGTCTTGGATTTCATAGAGTTAATTACAAGGGATCTTCTGGA  200

seq1  GGAGGTCTGGCTTTGGGGCAGGGCAGCTGTCCTACCGATGGTGACCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCTGGCTTTGGGGCAGGGCAGCTGTCCTACCGATGGTGACCACCA  250

seq1  GGGGGAGCAGCTGGCCTGGTGCTGGCCTGGTGGTGCTTTGGTGAGTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAGCAGCTGGCCTGGTGCTGGCCTGGTGGTGCTTTGGTGAGTGGGT  300

seq1  GGACCACACCCTCCAAGAGAAGGGGCTGGCCAGGAACAGCTAGGATATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCACACCCTCCAAGAGAAGGGGCTGGCCAGGAACAGCTAGGATATCC  350

seq1  CCCATCCCCCAGTGGCTTCTCCTCTTAGCCCTCCCATCTGCAGTCTGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCCCCAGTGGCTTCTCCTCTTAGCCCTCCCATCTGCAGTCTGCAG  400

seq1  AGCCATCTGGTCTCCACCCTGGGGACATCCTTCCCACTCTCCCCAACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTGGTCTCCACCCTGGGGACATCCTTCCCACTCTCCCCAACTGG  450

seq1  GGTTGAGTGGGGACTCTGATGAGGGGGTTGGTTGGAAGTGCCTAGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAGTGGGGACTCTGATGAGGGGGTTGGTTGGAAGTGCCTAGGGTGG  500

seq1  CAGCCTTGGCAGCCCCGCCCCCTCAAAGGCCATTCAATTCTTTTCCTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTGGCAGCCCCGCCCCCTCAAAGGCCATTCAATTCTTTTCCTGGG  550

seq1  CCTTTTCTTCTGATGGCCTCTGACCTCCTCCTTCCTACCCTTCTGCTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTTCTGATGGCCTCTGACCTCCTCCTTCCTACCCTTCTGCTAGG  600

seq1  CACATCCCAGGCCACAGCAAGTGAGATCAGTGTGGGAGGACACCCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCCAGGCCACAGCAAGTGAGATCAGTGTGGGAGGACACCCAGAAA  650

seq1  GTACTGGAAACTTGAAACAGGGAAGGGAAGTGAGAGTTAGGACAGTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGAAACTTGAAACAGGGAAGGGAAGTGAGAGTTAGGACAGTCAGA  700

seq1  CAGACAGACCATCACACACACACACACACACACA  734
      ||||||||||||||||||||||||||||||||||
seq2  CAGACAGACCATCACACACACACACACACACACA  734