BAC Information

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BAC

Clone NameB6Ng01-244D13
Chromosome7 (Build37)
Map Location 128,666,007 - 128,708,204
singlet/doubletdoublet
Overlap genenone
Upstream geneAbca16, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2
Downstream geneUsp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1, LOC668486
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244D13.bB6Ng01-244D13.g
ACCGA053410GA053411
length1,0651,098
definitionB6Ng01-244D13.b B6Ng01-244D13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,666,007 - 128,667,068)(128,707,091 - 128,708,204)
sequence
gaattcattcacctcaaagccaagcccacttcaaggggagtcactggaaa
cagttggtcattagtcatcatcagaatccagaactgtctcttcagagagg
atgccatactgaaaacaaacttaccacacagcaccacatgctaggtcaca
tggacttccagttctctatgggcaaagctgtcttcagctcacttagggaa
acccatacctagcacagaacccagcctgacacatgatcagctgccaagat
ggcaagctctagaatcatcctgggagacaaacctctggtcatatcaatgg
ggagtttctagactgggctcatcaaagtgaaaaggctcaccctaaatgtg
ggtagcactattccagctgggattcaagactgaacaagaagaagaaagtt
agctgggtgccagcatttatttctctctgcttcttgactcagatgcagtg
tgatcagctgccttaagatcatactgccatgacttcctcgccatggcaga
ctgtgagccctcagactgtgagccaaaataaatgcttccttccataagat
gctttggttgggcatttcatcactgcaagatgaaaatgtaactaatccag
acaagtgagaaagcacagggtagattaagaagagaatggtactggaatcc
atcaggcctgagtgaaaatccttctctctattgggagtaactcaatgctg
gtatctttttcttttctccaagagcaatgttttggtattaggttgatacc
tgctttactgttcatcagtgtattaggtttttatcattaggatccattta
cctgtcatggacaaatgaagagaggaaaggatttctcctggctcacagtt
ttagaccatcagctgggaaaggatgaagtgtcaaggtagaaaacagttta
tatgatggtggagaggtttctaagaaaggaataggaagccacggagacat
acaacccaaaggacttcccctcactgatctactcttccagccctgtccca
tccccaaactttttagacctctgaaaaataaaaaccatgggctgggggtt
aggggggtgggagga
gaattcagtgccacttttggtctgaattcaaatgattcaaatgccatctc
attctcttgaacagtttttcctcctgctgatgcgttctgtgttgtaacta
ctcgtgttagttgttgtctatctttctgcattggcataaggtccagagtg
aatgttagatgcctgttttgttctcatgtggttctcttaccctagaacac
tacctggtggttactacgctctgtctctctcactgtttgtctttctctgc
ctgtctctgtctgtcttggtctctctccttctgtttgtctcttgtctctg
tctctctgtctcactccatttgtctctgtctctgattctccctctctttc
cctccttcacccacagaaatcgtgcaatgacataacaaagaagagagccc
tctctaagagttaagaatgctggcacctgctcttggatttccagtctcca
taactgtgacaaatgcatgtttgctgttcaagccacctgctcagtgatgt
tctgtgatgttctgtgaaagtatcctgaactgatagagacagttatgagc
caagctcaggagccaagcagttcggaggccagctggacagtgtcaagtgg
agacttctggaattacgaaaagccagaattgtcataagcagtgggaagta
atggcagaatgggcaaggactggcagtgcccatgttccctgtgtaagccg
tttaatgtcttcggagatgcctatagttctatcccactccgaggggctct
tactttaagatgtggtaccagccaagaagcagtgaggaagaagaaattag
gaagagtgagccgtaaggaagtctatcctggggctcttctttactgcttt
ctgaatctgttttccactgcaaatcagacccttccatccagcaccctctg
gcaaccctttgcattcctttctctctttctcacgccccggtagaacctgg
agttactctctttacaccaccaggtggcacatgcttcgggagtcaaaacc
tagagtaatatcactgagcacaactctggtagtagcaagtgtactacata
tctcattaactctcgacactcaagaagtaatgctacctattatctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128666007_128667068
seq2: B6Ng01-244D13.b_43_1107

seq1  GAATTCATTCACCTCAAAGCCAAGCCCACTTCAAGGGGAGTCACTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCACCTCAAAGCCAAGCCCACTTCAAGGGGAGTCACTGGAAA  50

seq1  CAGTTGGTCATTAGTCATCATCAGAATCCAGAACTGTCTCTTCAGAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGTCATTAGTCATCATCAGAATCCAGAACTGTCTCTTCAGAGAGG  100

seq1  ATGCCATACTGAAAACAAACTTACCACACAGCACCACATGCTAGGTCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCATACTGAAAACAAACTTACCACACAGCACCACATGCTAGGTCACA  150

seq1  TGGACTTCCAGTTCTCTATGGGCAAAGCTGTCTTCAGCTCACTTAGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTTCCAGTTCTCTATGGGCAAAGCTGTCTTCAGCTCACTTAGGGAA  200

seq1  ACCCATACCTAGCACAGAACCCAGCCTGACACATGATCAGCTGCCAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATACCTAGCACAGAACCCAGCCTGACACATGATCAGCTGCCAAGAT  250

seq1  GGCAAGCTCTAGAATCATCCTGGGAGACAAACCTCTGGTCATATCAATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCTCTAGAATCATCCTGGGAGACAAACCTCTGGTCATATCAATGG  300

seq1  GGAGTTTCTAGACTGGGCTCATCAAAGTGAAAAGGCTCACCCTAAATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCTAGACTGGGCTCATCAAAGTGAAAAGGCTCACCCTAAATGTG  350

seq1  GGTAGCACTATTCCAGCTGGGATTCAAGACTGAACAAGAAGAAGAAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACTATTCCAGCTGGGATTCAAGACTGAACAAGAAGAAGAAAGTT  400

seq1  AGCTGGGTGCCAGCATTTATTTCTCTCTGCTTCTTGACTCAGATGCAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGTGCCAGCATTTATTTCTCTCTGCTTCTTGACTCAGATGCAGTG  450

seq1  TGATCAGCTGCCTTAAGATCATACTGCCATGACTTCCTCGCCATGGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAGCTGCCTTAAGATCATACTGCCATGACTTCCTCGCCATGGCAGA  500

seq1  CTGTGAGCCCTCAGACTGTGAGCCAAAATAAATGCTTCCTTCCATAAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGCCCTCAGACTGTGAGCCAAAATAAATGCTTCCTTCCATAAGAT  550

seq1  GCTTTGGTTGGGCATTTCATCACTGCAAGATGAAAATGTAACTAATCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGTTGGGCATTTCATCACTGCAAGATGAAAATGTAACTAATCCAG  600

seq1  ACAAGTGAGAAAGCACAGGGTAGATTAAGAAGAGAATGGTACTGGAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGAGAAAGCACAGGGTAGATTAAGAAGAGAATGGTACTGGAATCC  650

seq1  ATCAGGCCTGAGTGAAAATCCTTCTCTCTATTGGGAGTAACTCAATGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGCCTGAGTGAAAATCCTTCTCTCTATTGGGAGTAACTCAATGCTG  700

seq1  GTATCTTTTTCTTTTCTCCAAGAGCAATGTTTTGGTATTAGGTTGATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTTTTCTTTTCTCCAAGAGCAATGTTTTGGTATTAGGTTGATACC  750

seq1  TGCTTTACTGTTCATCAGTGTATTAGGTTTTTATCATTAGGATCCATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACTGTTCATCAGTGTATTAGGTTTTTATCATTAGGATCCATTTA  800

seq1  CCTGTCATGGACAAATGAAGAGAGG-AAGGATTTCTCCTGGCTCACAGTT  849
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CCTGTCATGGACAAATGAAGAGAGGAAAGGATTTCTCCTGGCTCACAGTT  850

seq1  TTAGACCATCAGGCTGGG-AAGGATGAAGTGTCAAGGTAGAAAACAGTTT  898
      ||||||||||| |||||| |||||||||||||||||||||||||||||||
seq2  TTAGACCATCA-GCTGGGAAAGGATGAAGTGTCAAGGTAGAAAACAGTTT  899

seq1  ATATGATGGTGGAGAGGTTTCTAAGAAAGGAATAGGAAGCCACGGAGACA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGGTGGAGAGGTTTCTAAGAAAGGAATAGGAAGCCACGGAGACA  949

seq1  TACAACCC-AAGGACTTCCCCTCACTGATCTACTCTTCCAGCCCTGTCCC  997
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCAAAGGACTTCCCCTCACTGATCTACTCTTCCAGCCCTGTCCC  999

seq1  ATCCCCCAAACTTTTTAGAACCTCTG-AAAATAAAAACCATGGGCTGGGG  1046
      || ||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  AT-CCCCAAACTTTTTAG-ACCTCTGAAAAATAAAAACCATGGGCTGGGG  1047

seq1  GGTA--GGGGTGGGAGGA  1062
      | ||  ||||||||||||
seq2  GTTAGGGGGGTGGGAGGA  1065

seq1: chr7_128707091_128708204
seq2: B6Ng01-244D13.g_65_1162 (reverse)

seq1  TACAGATAATA-GTAGCATTTACTTCTTTGAGTGTCGAGAAGTTTAAATG  49
      ||||||||||| |||||| ||||||| |||||||||||| ||||  ||||
seq2  TACAGATAATAGGTAGCA-TTACTTC-TTGAGTGTCGAG-AGTT--AATG  45

seq1  AGATAATGTAAGTACAACCTGCTTACCTACCCAGAGTTGTGCTCCAGTGA  99
      |||| |||| ||||| || ||||   ||| ||||||||||||| ||||||
seq2  AGAT-ATGT-AGTAC-ACTTGCT--ACTA-CCAGAGTTGTGCT-CAGTGA  88

seq1  TTAATTACCTCTAGGTTTTGACTCCCCGAAGCATGGTTGCCACCTGGTGG  149
      |  |||| ||||||||||||||| |||||||||||  |||||||||||||
seq2  T--ATTA-CTCTAGGTTTTGACT-CCCGAAGCATG--TGCCACCTGGTGG  132

seq1  TGT-AAGAGAGTAACTCCAGGTTCTA-CGGGGCGTGAGAAAGAGAGAAAG  197
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTAAAGAGAGTAACTCCAGGTTCTACCGGGGCGTGAGAAAGAGAGAAAG  182

seq1  GAATGCAAAGGGTTGCCAGAGGGTGCTGGATGGAAGGGTCTGATTTTGCA  247
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAATGCAAAGGGTTGCCAGAGGGTGCTGGATGGAAGGGTCTGA-TTTGCA  231

seq1  GTGGAAAACAGATTCAGAAAGCAGTAAAGAAGAGCCCCAGGATAGACTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAACAGATTCAGAAAGCAGTAAAGAAGAGCCCCAGGATAGACTTC  281

seq1  CTTACGGCTCACTCTTCCTAATTTCTTCTTCCTCACTGCTTCTTGGCTGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACGGCTCACTCTTCCTAATTTCTTCTTCCTCACTGCTTCTTGGCTGG  331

seq1  TACCACATCTTAAAGTAAGAGCCCCTCGGAGTGGGATAGAACTATAGGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATCTTAAAGTAAGAGCCCCTCGGAGTGGGATAGAACTATAGGCA  381

seq1  TCTCCGAAGACATTAAACGGCTTACACAGGGAACATGGGCACTGCCAGTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGAAGACATTAAACGGCTTACACAGGGAACATGGGCACTGCCAGTC  431

seq1  CTTGCCCATTCTGCCATTACTTCCCACTGCTTATGACAATTCTGGCTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCATTCTGCCATTACTTCCCACTGCTTATGACAATTCTGGCTTTT  481

seq1  CGTAATTCCAGAAGTCTCCACTTGACACTGTCCAGCTGGCCTCCGAACTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATTCCAGAAGTCTCCACTTGACACTGTCCAGCTGGCCTCCGAACTG  531

seq1  CTTGGCTCCTGAGCTTGGCTCATAACTGTCTCTATCAGTTCAGGATACTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTCCTGAGCTTGGCTCATAACTGTCTCTATCAGTTCAGGATACTT  581

seq1  TCACAGAACATCACAGAACATCACTGAGCAGGTGGCTTGAACAGCAAACA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAACATCACAGAACATCACTGAGCAGGTGGCTTGAACAGCAAACA  631

seq1  TGCATTTGTCACAGTTATGGAGACTGGAAATCCAAGAGCAGGTGCCAGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGTCACAGTTATGGAGACTGGAAATCCAAGAGCAGGTGCCAGCA  681

seq1  TTCTTAACTCTTAGAGAGGGCTCTCTTCTTTGTTATGTCATTGCACGATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAACTCTTAGAGAGGGCTCTCTTCTTTGTTATGTCATTGCACGATT  731

seq1  TCTGTGGGTGAAGGAGGGAAAGAGAGGGAGAATCAGAGACAGAGACAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGTGAAGGAGGGAAAGAGAGGGAGAATCAGAGACAGAGACAAAT  781

seq1  GGAGTGAGACAGAGAGACAGAGACAAGAGACAAACAGAAGGAGAGAGACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGACAGAGAGACAGAGACAAGAGACAAACAGAAGGAGAGAGACC  831

seq1  AAGACAGACAGAGACAGGCAGAGAAAGACAAACAGTGAGAGAGACAGAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGACAGAGACAGGCAGAGAAAGACAAACAGTGAGAGAGACAGAGC  881

seq1  GTAGTAACCACCAGGTAGTGTTCTAGGGTAAGAGAACCACATGAGAACAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAACCACCAGGTAGTGTTCTAGGGTAAGAGAACCACATGAGAACAA  931

seq1  AACAGGCATCTAACATTCACTCTGGACCTTATGCCAATGCAGAAAGATAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCATCTAACATTCACTCTGGACCTTATGCCAATGCAGAAAGATAG  981

seq1  ACAACAACTAACACGAGTAGTTACAACACAGAACGCATCAGCAGGAGGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACTAACACGAGTAGTTACAACACAGAACGCATCAGCAGGAGGAA  1031

seq1  AAACTGTTCAAGAGAATGAGATGGCATTTGAATCATTTGAATTCAGACCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTCAAGAGAATGAGATGGCATTTGAATCATTTGAATTCAGACCA  1081

seq1  AAAGTGGCACTGAATTC  1114
      |||||||||||||||||
seq2  AAAGTGGCACTGAATTC  1098