BAC Information

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BAC

Clone NameB6Ng01-244K03
Chromosome7 (Build37)
Map Location 58,560,420 - 58,561,534
singlet/doubletsinglet
Overlap genenone
Upstream geneNell1, 4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
Downstream geneLOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244K03.bB6Ng01-244K03.g
ACCGA053718GA053719
length1,1861,111
definitionB6Ng01-244K03.b B6Ng01-244K03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcacttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttgaatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgttttattgacagtgtctcttgccttgcagaagctttggagtttca
tgaagtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctattcaggaattttttctcctgtgcccatatcttcaaggcttttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagataggtatggatcgattcg
cattcttctacatgataaccggagttatgccagcaccatttgttgaaaat
gctgtctttcttccactggattgttttagctcccttgtcgaagaccaagt
gaccataggtatgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtcagtataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggaatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattacagatg
aatttgcagatttctctttctaatttgttgaagaattgagttccaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccaagatattttatattac
ttgtgactattgagaaggtgttgttccctaatttctttctcagcctgttt
atctttgtatagagaaagggcattgacttggttgagtttaattttataat
cagctacttcacccgaagctgttttatcagaatagagttctctctgggtc
gaattttagggaaccgtattaacacctatcctatctcctcgcaaggaact
tgactccttttcccaatggatatcccccctgtagtc
gaattcttactaccaagacacagctgccaaaatacagcggacatagcttt
agtttcctctcctctaaatcccttgcctactcagagaaacagctacctgt
tacctgctatcaagttttcttgactgcctagtgtctaagcctattgactt
attctcaaaatgatgatggagaaggaggaggaaataggagaaatagaagg
aaaagagagaaaataaggaagcttttacatatttcattcttttttgtaga
ataacttctttaagatgataatcttcttggagatggacaacaatccactg
tgacctatccatttgcccttttcttttgccatttataacagaagtggtac
attatagggagactattcaagcttctctttaacagaattagattaaatta
gaattaaattaaaatcattagagaatgaacagatggctggagctacttta
aaataagaattttatgtcagcataacactaacagaattatctcttgagta
atctccaataacctctccaggttgcaaacatcaaatggtttccctcctca
aagtcttatggtaatggtctttacagttgtcctggtgttttgttgttgtt
gttgttttgactatttcaactatctcagtctttgccttttttgggacaca
cttagatttgaactctcccactgcagctcactagctgtgtgatcctcaga
aggatgtttgagctcttggagcctgaatatcttcataaacaaaatgataa
agagacaccaccagggaaaccaggagctgttctgcacagtgttgtcaaat
gctatgttcaaaggaaattcttaggaaacttacatttgataaagaaataa
ttaataaataatcctgtgttcagacctatatgatattctaattctaatgt
actatgtgagcacccagctctttatggaataaatgcagaggcaaagtagt
aacaactatggtgagctatagctagggacttggtttgtttgtgtgtgagc
tgcttttggccaatgggaaactgagagctctcaatcaggcttcatgtcct
cccagcctatagagatggttgaacagaaattaaaacacgtgtcagcctct
gagcttgagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58560420_58561534
seq2: B6Ng01-244K03.g_66_1176 (reverse)

seq1  TTCTCAAGCTCAGA-GCTGACACGTGTTT--ATATCTGTCAACCCATCTT  47
      |||||||||||||| ||||||||||||||  || |||||  | |||||| 
seq2  TTCTCAAGCTCAGAGGCTGACACGTGTTTTAATTTCTGTTCAACCATCT-  49

seq1  CCTTATAAGCCTGGAGACCATGAAAGGCCTGGAATGAGAGCTCTCAGTTT  97
         |||| ||  ||||  ||||||  |||| || ||||||||||||||||
seq2  --CTATAGGCTGGGAGGACATGAA--GCCT-GATTGAGAGCTCTCAGTTT  94

seq1  CCCATTGGCCCAAAAGCAGCTCACACACAAACAAACCAAGTCCCTAGCTA  147
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTGG-CCAAAAGCAGCTCACACACAAACAAACCAAGTCCCTAGCTA  143

seq1  TAGCTCACCCATAG-TGTTACTACTTTGCCTCTGCATTTATTCCATAAAG  196
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TAGCTCA-CCATAGTTGTTACTACTTTGCCTCTGCATTTATTCCATAAAG  192

seq1  AGCTGGGTGCTCACATAGTACATTAGAAATTAGAATATCATATAGGTCTG  246
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCTGGGTGCTCACATAGTACATTAG-AATTAGAATATCATATAGGTCTG  241

seq1  AACACAGGATTATTTATTAATTA-TTCTTTATCAAATGTAAGTTTCCTAA  295
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AACACAGGATTATTTATTAATTATTTCTTTATCAAATGTAAGTTTCCTAA  291

seq1  GAATTTCCTTTGAACATAGCATTTGACAACACTGTGCAGAACAGCTCCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCCTTTGAACATAGCATTTGACAACACTGTGCAGAACAGCTCCTG  341

seq1  GTTTCCCTGGTGGTGTCTCTTTATCATTTTGTTTATGAAGATATTCAGGC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCTGGTGGTGTCTCTTTATCATTTTGTTTATGAAGATATTCAGGC  391

seq1  TCCAAGAGCTCAAACATCCTTCTGAGGATCACACAGCTAGTGAGCTGCAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGAGCTCAAACATCCTTCTGAGGATCACACAGCTAGTGAGCTGCAG  441

seq1  TGGGAGAGTTCAAATCTAAGTGTGTCCCAAAAAAGGCAAAGACTGAGATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGTTCAAATCTAAGTGTGTCCCAAAAAAGGCAAAGACTGAGATA  491

seq1  GTTGAAATAGTCAAAACAACAACAACAACAAAACACCAGGACAACTGTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAATAGTCAAAACAACAACAACAACAAAACACCAGGACAACTGTAA  541

seq1  AGACCATTACCATAAGACTTTGAGGAGGGAAACCATTTGATGTTTGCAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTACCATAAGACTTTGAGGAGGGAAACCATTTGATGTTTGCAAC  591

seq1  CTGGAGAGGTTATTGGAGATTACTCAAGAGATAATTCTGTTAGTGTTATG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGAGGTTATTGGAGATTACTCAAGAGATAATTCTGTTAGTGTTATG  641

seq1  CTGACATAAAATTCTTATTTTAAAGTAGCTCCAGCCATCTGTTCATTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATAAAATTCTTATTTTAAAGTAGCTCCAGCCATCTGTTCATTCTC  691

seq1  TAATGATTTTAATTTAATTCTAATTTAATCTAATTCTGTTAAAGAGAAGC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATTTTAATTTAATTCTAATTTAATCTAATTCTGTTAAAGAGAAGC  741

seq1  TTGAATAGTCTCCCTATAATGTACCACTTCTGTTATAAATGGCAAAAGAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAGTCTCCCTATAATGTACCACTTCTGTTATAAATGGCAAAAGAA  791

seq1  AAGGGCAAATGGATAGGTCACAGTGGATTGTTGTCCATCTCCAAGAAGAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAAATGGATAGGTCACAGTGGATTGTTGTCCATCTCCAAGAAGAT  841

seq1  TATCATCTTAAAGAAGTTATTCTACAAAAAAGAATGAAATATGTAAAAGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTTAAAGAAGTTATTCTACAAAAAAGAATGAAATATGTAAAAGC  891

seq1  TTCCTTATTTTCTCTCTTTTCCTTCTATTTCTCCTATTTCCTCCTCCTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATTTTCTCTCTTTTCCTTCTATTTCTCCTATTTCCTCCTCCTTC  941

seq1  TCCATCATCATTTTGAGAATAAGTCAATAGGCTTAGACACTAGGCAGTCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCATCATTTTGAGAATAAGTCAATAGGCTTAGACACTAGGCAGTCA  991

seq1  AGAAAACTTGATAGCAGGTAACAGGTAGCTGTTTCTCTGAGTAGGCAAGG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTTGATAGCAGGTAACAGGTAGCTGTTTCTCTGAGTAGGCAAGG  1041

seq1  GATTTAGAGGAGAGGAAACTAAAGCTATGTCCGCTGTATTTTGGCAGCTG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGAGGAGAGGAAACTAAAGCTATGTCCGCTGTATTTTGGCAGCTG  1091

seq1  TGTCTTGGTAGTAAGAATTC  1115
      ||||||||||||||||||||
seq2  TGTCTTGGTAGTAAGAATTC  1111