BAC Information

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BAC

Clone NameB6Ng01-245E06
Chromosome7 (Build37)
Map Location 49,447,913 - 49,448,940
singlet/doubletsinglet
Overlap geneEG637898
Upstream geneEG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556
Downstream geneGprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245E06.bB6Ng01-245E06.g
ACCGA054195GA054196
length1,0301,187
definitionB6Ng01-245E06.b B6Ng01-245E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatcacataaagataaactcaatgctcccattaagcttaatct
acttattgtcaaacaattgtctaatgtttgcttttatttacatcaacaca
agacactctcatccttactccaagaagactatcttaacagtgatctgtga
tggacaagatatatggctgtaaaaggtcttgaaataagtgatgctttaat
ccctatccacaaacaagaactttataactatcccttctaaggtttagtgg
aaataaagtcataatggttataagatgaggactgcaagttgcctagttcc
aggcaatacattcattgctttaagaaactctcaaaaattaagcataagtt
tcttggttcattatgcattaaaatgggttgtagaaaaatgaggaatttat
cttatccttctttgatataaaatctccttcaaagataatcaaagaaagca
gtgaacgatttcactagtgtaaaaattaatgactacactgagttcccatg
tacaatttgaacacaatggtcatgaagatgaacatgtttaaacaaaatag
gtaatgcaccattttgaaaaaaaatcatgaaaatggtaaagggatgatta
agatagaatgtattgacaagtgcaaacaggagggatgtgtacctctgata
tattgaatacatgtgggcaattgtaaaaaagtgatattgaaaaaaggtaa
acagcatcgaggatacatatataaaacagataacaagggagattacataa
agaccatctcttctcattattcccccagactttatctctcaatgtcatct
ttagtgatgcaacagtgcaccagcttcagcctccctttcttccacatctt
atgtggataccatagctcatcccattcaaatctacctgcccgactcattg
ttgtatccaactttcgaactcaaacaaacatgccctggttaaaatgtaga
ctataacctctagaaagccaagtgatctgccccagacttctacttactct
tcttgtgtttttcttagaccagaatccccc
gaattctctggctttgtttcccatttttaattggggcttatttcacttga
tgtatctaacttcttgagttctttgtaaattttgaatattagacctctgt
tgaatgtacagttagtgaagatcttttcccattctctgggttgctgtttt
atcctattgatgatatccttagcctggtaaaagctttttcattacatgag
gtcaaatttattaatttattaattgttgattaattgttgatctgttcagg
aggttggctcttgtgccaatgagttcaaggcagttcaatttatcatctat
tatatttagtgtgtcaggaattatgttgagttatttaatccatttggact
tgagttacgtgcagggtgataaatatggctttatttacattcttctctat
ccacacatccagttagaccagagctgaagatgtgtccttttttccattgt
atagctttggctactttgtcaaacatcaagtgtccataggagggaaggtt
gatttttttggtgattttttttctttttctttattagatattttctttat
ttacatttcaaatgttatctcttttcctattttcccctccaaaaatcccc
tatcctctcccctcttcccctgccccccaaccttcccacttgaagtgtcc
aaaatttggtcttccttcttgagtttcacatggtttgcaaattgtatctt
gggtgctgtaaacttctggcctaatatccacttatcactgagtgcatatc
atgtgagtttgactccagaaatccaaataacactattcaaatgggatgca
gttctaaagaaagaattatcaattgaggaataccaaatggctgagaagca
ccaaaaaaaaaaaaaaatttcaacatccttaatcatcagggaaatgcaat
caaacaaccctgagattcacttcatgccagtcagaatggctaagatcaaa
aactcaggtacagcattgctggccaaagatatggaagaaagaggtacact
gctcattacctgtagatgccaagcctgggtacaaccactctggaatcagt
ttggtggtttcctcagaaaaatggaacatagtctactggaaagatccgca
aatacctcttcctgggcttattacccgagatgatccgaatatggtataag
gaaccgtcttcacatagtgtgtccatggcgcagcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49447913_49448940
seq2: B6Ng01-245E06.b_46_1075 (reverse)

seq1  GGGGGATTCTGGTCTAAG-AAAACACA--GAGAGTAAGTAGAAGGTCTTG  47
      |||||||||||||||||| ||||||||   ||||||||||||| ||| ||
seq2  GGGGGATTCTGGTCTAAGAAAAACACAAGAAGAGTAAGTAGAA-GTC-TG  48

seq1  GGGCAGATCACTTGGCTTTCTAGAGGTTATAGTCTACATTTT-ACCAGGG  96
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGGCAGATCACTTGGCTTTCTAGAGGTTATAGTCTACATTTTAACCAGGG  98

seq1  CATGTTTGTTTGAGTTCGAAAGTTGGATACAACAATGAGTCGGGCAGGTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTGTTTGAGTTCGAAAGTTGGATACAACAATGAGTCGGGCAGGTA  148

seq1  GATTTGAATGGGATGAGCTATGGTATCCACATAAGATGTGGAAGAAAGGG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAATGGGATGAGCTATGGTATCCACATAAGATGTGGAAGAAAGGG  198

seq1  AGGCTGAAGCTGGTGCACTGTTGCATCACTAAAGATGACATTGAGAGATA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAAGCTGGTGCACTGTTGCATCACTAAAGATGACATTGAGAGATA  248

seq1  AAGTCTGGGGGAATAATGAGAAGAGATGGTCTTTATGTAATCTCCCTTGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGGGGAATAATGAGAAGAGATGGTCTTTATGTAATCTCCCTTGT  298

seq1  TATCTGTTTTATATATGTATCCTCGATGCTGTTTACCTTTTTTCAATATC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTTTATATATGTATCCTCGATGCTGTTTACCTTTTTTCAATATC  348

seq1  ACTTTTTTACAATTGCCCACATGTATTCAATATATCAGAGGTACACATCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTTACAATTGCCCACATGTATTCAATATATCAGAGGTACACATCC  398

seq1  CTCCTGTTTGCACTTGTCAATACATTCTATCTTAATCATCCCTTTACCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTTTGCACTTGTCAATACATTCTATCTTAATCATCCCTTTACCAT  448

seq1  TTTCATGATTTTTTTTCAAAATGGTGCATTACCTATTTTGTTTAAACATG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGATTTTTTTTCAAAATGGTGCATTACCTATTTTGTTTAAACATG  498

seq1  TTCATCTTCATGACCATTGTGTTCAAATTGTACATGGGAACTCAGTGTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTTCATGACCATTGTGTTCAAATTGTACATGGGAACTCAGTGTAG  548

seq1  TCATTAATTTTTACACTAGTGAAATCGTTCACTGCTTTCTTTGATTATCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAATTTTTACACTAGTGAAATCGTTCACTGCTTTCTTTGATTATCT  598

seq1  TTGAAGGAGATTTTATATCAAAGAAGGATAAGATAAATTCCTCATTTTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGAGATTTTATATCAAAGAAGGATAAGATAAATTCCTCATTTTTC  648

seq1  TACAACCCATTTTAATGCATAATGAACCAAGAAACTTATGCTTAATTTTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCCATTTTAATGCATAATGAACCAAGAAACTTATGCTTAATTTTT  698

seq1  GAGAGTTTCTTAAAGCAATGAATGTATTGCCTGGAACTAGGCAACTTGCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTTTCTTAAAGCAATGAATGTATTGCCTGGAACTAGGCAACTTGCA  748

seq1  GTCCTCATCTTATAACCATTATGACTTTATTTCCACTAAACCTTAGAAGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCATCTTATAACCATTATGACTTTATTTCCACTAAACCTTAGAAGG  798

seq1  GATAGTTATAAAGTTCTTGTTTGTGGATAGGGATTAAAGCATCACTTATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTTATAAAGTTCTTGTTTGTGGATAGGGATTAAAGCATCACTTATT  848

seq1  TCAAGACCTTTTACAGCCATATATCTTGTCCATCACAGATCACTGTTAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACCTTTTACAGCCATATATCTTGTCCATCACAGATCACTGTTAAG  898

seq1  ATAGTCTTCTTGGAGTAAGGATGAGAGTGTCTTGTGTTGATGTAAATAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTCTTCTTGGAGTAAGGATGAGAGTGTCTTGTGTTGATGTAAATAAA  948

seq1  AGCAAACATTAGACAATTGTTTGACAATAAGTAGATTAAGCTTAATGGGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACATTAGACAATTGTTTGACAATAAGTAGATTAAGCTTAATGGGA  998

seq1  GCATTGAGTTTATCTTTATGTGATATGAATTC  1028
      ||||||||||||||||||||||||||||||||
seq2  GCATTGAGTTTATCTTTATGTGATATGAATTC  1030