BAC Information

Click to search

BAC

Clone NameB6Ng01-245H14
Chromosome7 (Build37)
Map Location 9,271,539 - 9,433,269
singlet/doubletdoublet
Overlap geneLOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781
Downstream geneLOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245H14.bB6Ng01-245H14.g
ACCGA054349GA054350
length9421,137
definitionB6Ng01-245H14.b B6Ng01-245H14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,271,539 - 9,272,071)(9,432,134 - 9,433,269)
sequence
gaattcttcacgaatttattttttttttacttttttattatttttaatac
tttttattaggtattttcctcatttacatttccaatgctatcacaaacgt
cccccataccctccctcccactcccctacccacccactcccactttttga
ccctggcgttcccctgtactggggcatataatgtttgcaagtccaatggg
cctctctttccagtgatggccgaatatgccatctattgatacatatgcag
ctagagtcaagagctccaaggcactggttagttcataatgttgttctacc
tatagggttgcagatccatttagctccttgggtactttctctagctcctc
cattggggaccctgtgatccatccaatagctgactgtgagaacccacttc
tgtttttgctaggccccggcatagtctcacaagagacagctatatctggg
tcctttcagcaaaatcttgctagtatatgacatggtgtcagcgtttggaa
attgattatgagatgaaaccctggatatggcatgctctagatattccatc
cttttgacacagatccaaactttgtctctgtatctccttccttggtgttt
tgttcccaattctaaggaggggcaaagtgtccacactttggtcttcgtct
ttcttgagtttcatgcatttaggaaatggtattttatatcttgggtattc
taagtttctgggataatatccacttagagtgagtacatattgtgtgagtt
cctttgtgtttgggttacctcactcaggacggtaccctccaggtccatcc
atctgcctagaaatttcataaattcattctttttaaaagctgagtagtac
tccattgtgtaaattttaccacattttctgtatccattccctctgttgag
gggcatctgggttcttttcacttctgggctattattaaataa
gaattccaggtcagccaggactatacaatgaaaccctgtctcaaaaaaaa
aaaaaaaatcaaaacaaaacaaaaacccaaaacaaaaaccaaaaaacaaa
acaaaacgcatcaatgttttttaagagccaaacgataatcagtttatatg
ttcttatagatatgttagtttatattattatattcagactattgtcatgc
ttattgaaaattgttagcctaattttacatcatgaatagagctataaaat
actaatttttatacctttcttatttaaacatgaatcttaatgtgttcatt
tgctgacaattaacatagaagtttgtaacaaaactcaagatcaccattct
ttagagcaccactctactataatgtgaccttgaagggaaaaagtccaata
gggaagtaaaacttaagcataaagcaccacttaagacgacctgataaaaa
ctttgcgatgcttcgggtagagaaagctcagaataagagctcagaatgtc
tggagaaagaatgatgtcaaaagataattccccattcctacattgcctgg
cgtaggtcatgcaatgaagttttaaatgtgcaaaataaagaaagagttag
gatatacaacttgaaaattaaccctgataataaaactaggtttctttttg
cctttagccttctttaaaaagtataccagttgaatgttagaaatataatt
gcattttttttttataaaagtcctactatatatcaggcacaaaggtaaaa
ataataaatttctctatatataaacttgctatttacttactgtttctcca
tataagatattaaagtatactctgataaatgatgcttatatgtccatgca
gtgtgacacatggaacacatattaggggtatctaactctcatttatggtc
aagtagtacttcctaatatgttataagagcacaactccaaaaataattat
ttttctgagtgaatgataggaagttgacaaaaatccaaagtaagggaaag
aatgagcaatccaggagtatcagcagtttttggaggattattactctata
tatagcaaacaaaaacggagaattggtctcattccagaaactcaaaaatc
ttgtcttacaatagaatgattagtcaagtccgaagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9271539_9272071
seq2: B6Ng01-245H14.b_46_579

seq1  GAATTCTTCACGAATTTA-TTTTTTTTTACTTTTTTATTATTTTTAATAC  49
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GAATTCTTCACGAATTTATTTTTTTTTTACTTTTTTATTATTTTTAATAC  50

seq1  TTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCACAAACGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGGTATTTTCCTCATTTACATTTCCAATGCTATCACAAACGT  100

seq1  CCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTTGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATACCCTCCCTCCCACTCCCCTACCCACCCACTCCCACTTTTTGA  150

seq1  CCCTGGCGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAATGGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCGTTCCCCTGTACTGGGGCATATAATGTTTGCAAGTCCAATGGG  200

seq1  CCTCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTCCAGTGATGGCCGAATATGCCATCTATTGATACATATGCAG  250

seq1  CTAGAGTCAAGAGCTCCAAGGCACTGGTTAGTTCATAATGTTGTTCTACC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTCAAGAGCTCCAAGGCACTGGTTAGTTCATAATGTTGTTCTACC  300

seq1  TATAGGGATGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCCTC  349
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGTTGCAGATCCATTTAGCTCCTTGGGTACTTTCTCTAGCTCCTC  350

seq1  CATTGGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGGACCCTGTGATCCATCCAATAGCTGACTGTGAGAACCCACTTC  400

seq1  TGTTTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTATATCTGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTATATCTGGG  450

seq1  TCCTTTCAGCAAAATCTTGCTAGTATATGACATGGTGTCAGCGTTTGGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCAGCAAAATCTTGCTAGTATATGACATGGTGTCAGCGTTTGGAA  500

seq1  ATTGATTATGAGATGAAACCCTGGATATGGCATG  533
      ||||||||||||||||||||||||||||||||||
seq2  ATTGATTATGAGATGAAACCCTGGATATGGCATG  534

seq1: chr7_9432134_9433269
seq2: B6Ng01-245H14.g_67_1203 (reverse)

seq1  TGCTTC-GACTTGACTATTCCATCTATTGT-AGACAGGATTTTTGAGGTT  48
      |||||| |||||||||| ||  |||||||| ||||| ||||||||| |||
seq2  TGCTTCGGACTTGACTAATCATTCTATTGTAAGACAAGATTTTTGA-GTT  49

seq1  TCTGGGATGAGACCAATTCTCCG-TTTTGTTTGCTAATATATTAGAGTTA  97
      ||||| ||||||||||||||||| ||||||||||| ||||| ||||| ||
seq2  TCTGGAATGAGACCAATTCTCCGTTTTTGTTTGCT-ATATA-TAGAG-TA  96

seq1  ATATTCCT-CAAAAACTGCTGATACTCCTGGATTGCTCATTCTTTCCC-T  145
      ||| |||| ||||||||||||||||||||||||||||||||||||||| |
seq2  ATAATCCTCCAAAAACTGCTGATACTCCTGGATTGCTCATTCTTTCCCTT  146

seq1  ACTTTGGATTTTTGTCAACTTCCTATCATTCACTCAG-AAAATAATTATT  194
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACTTTGGATTTTTGTCAACTTCCTATCATTCACTCAGAAAAATAATTATT  196

seq1  TTTGGAGTTGTGCTTCTTATAACATATTTAGGAAGTACTACTTGACCATA  244
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  TTTGGAGTTGTGC-TCTTATAACATA-TTAGGAAGTACTACTTGACCATA  244

seq1  AATGAGAGTTAGATACCCCTAATATGTG-TCCATGTGTCACACTGCATGG  293
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGAGAGTTAGATACCCCTAATATGTGTTCCATGTGTCACACTGCATGG  294

seq1  ACATATAAGCATCATTTATCAGAGTATACTTTAATATCTTATATGGAGAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAAGCATCATTTATCAGAGTATACTTTAATATCTTATATGGAGAA  344

seq1  ACAGTAAGTAAATAGCAAGTTTATATATAGAGAAATTTATTATTTTTACC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGTAAATAGCAAGTTTATATATAGAGAAATTTATTATTTTTACC  394

seq1  TTTGTGCCTGATATATAGTAGGACTTTTATAAAAAAAAAATGCAATTATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCCTGATATATAGTAGGACTTTTATAAAAAAAAAATGCAATTATA  444

seq1  TTTCTAACATTCAACTGGTATACTTTTTAAAGAAGGCTAAAGGCAAAAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACATTCAACTGGTATACTTTTTAAAGAAGGCTAAAGGCAAAAAG  494

seq1  AAACCTAGTTTTATTATCAGGGTTAATTTTCAAGTTGTATATCCTAACTC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAGTTTTATTATCAGGGTTAATTTTCAAGTTGTATATCCTAACTC  544

seq1  TTTCTTTATTTTGCACATTTAAAACTTCATTGCATGACCTACGCCAGGCA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTTTGCACATTTAAAACTTCATTGCATGACCTACGCCAGGCA  594

seq1  ATGTAGGAATGGGGAATTATCTTTTGACATCATTCTTTCTCCAGACATTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGAATGGGGAATTATCTTTTGACATCATTCTTTCTCCAGACATTC  644

seq1  TGAGCTCTTATTCTGAGCTTTCTCTACCCGAAGCATCGCAAAGTTTTTAT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTTATTCTGAGCTTTCTCTACCCGAAGCATCGCAAAGTTTTTAT  694

seq1  CAGGTCGTCTTAAGTGGTGCTTTATGCTTAAGTTTTACTTCCCTATTGGA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCGTCTTAAGTGGTGCTTTATGCTTAAGTTTTACTTCCCTATTGGA  744

seq1  CTTTTTCCCTTCAAGGTCACATTATAGTAGAGTGGTGCTCTAAAGAATGG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCCTTCAAGGTCACATTATAGTAGAGTGGTGCTCTAAAGAATGG  794

seq1  TGATCTTGAGTTTTGTTACAAACTTCTATGTTAATTGTCAGCAAATGAAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTTGAGTTTTGTTACAAACTTCTATGTTAATTGTCAGCAAATGAAC  844

seq1  ACATTAAGATTCATGTTTAAATAAGAAAGGTATAAAAATTAGTATTTTAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAGATTCATGTTTAAATAAGAAAGGTATAAAAATTAGTATTTTAT  894

seq1  AGCTCTATTCATGATGTAAAATTAGGCTAACAATTTTCAATAAGCATGAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTATTCATGATGTAAAATTAGGCTAACAATTTTCAATAAGCATGAC  944

seq1  AATAGTCTGAATATAATAATATAAACTAACATATCTATAAGAACATATAA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCTGAATATAATAATATAAACTAACATATCTATAAGAACATATAA  994

seq1  ACTGATTATCGTTTGGCTCTTAAAAAACATTGATGCGTTTTGTTTTGTTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTATCGTTTGGCTCTTAAAAAACATTGATGCGTTTTGTTTTGTTT  1044

seq1  TTTGGTTTTTGTTTTGGGTTTTTGTTTTGTTTTGATTTTTTTTTTTTTTT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTGTTTTGGGTTTTTGTTTTGTTTTGATTTTTTTTTTTTTTT  1094

seq1  TGAGACAGGGTTTCATTGTATAGTCCTGGCTGACCTGGAATTC  1136
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCATTGTATAGTCCTGGCTGACCTGGAATTC  1137