BAC Information

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BAC

Clone NameB6Ng01-245J16
Chromosome7 (Build37)
Map Location 87,031,151 - 87,032,258
singlet/doubletsinglet
Overlap geneAp3s2
Upstream geneIsg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep
Downstream gene2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1, LOC100042402, Zscan2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245J16.bB6Ng01-245J16.g
ACCGA054445GA054446
length1,093568
definitionB6Ng01-245J16.b B6Ng01-245J16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccaaaagccattcaagtgtgttctaaatataacagggagaaatg
aaactgcaaacccattttcaacaagaccagaaggaaacacaaatcccaga
cccccaaacgatggcaaagagatcagagcaaggagctcaggcaaagctcc
ctttgcttcacacaaggaaaagatgtgacagagaaaatgcgagctagtga
cctcagaaggcctgtaaaacacactccctgaaggcaaagcacacaccaaa
ggaagtctttgttgatggaaggcctagagttgggaccacattaaaacaat
acacaagaagcctgctgtccgtgcctcacagaagtggtccctgtggcagc
agaaaatgccttcacactggggaagccttccttctcatgggtgcttagct
ttgttagctgcctagaaataaggttaaccgacttcacctacaactctcta
acacaggaataacaaagcccagcttagaataccctcccccaacaaaactc
ctaaaaatagctggcacctaaaaagcaaacccatttaaagatgtttataa
agagaagtctacacagcagcgaaataatgaaacaacaaagaaaattagga
aaccggaaaatcaaacgttagactaagatctccgaccagaacactgatgc
tgggagcacagtgacagcacaaagtgtcagccaagaaaagatagggcaga
agacagctcagcaggacagcaggagcacgcacagaccctgatctgattcc
agcactgcagacaaagcaaattacaatttaaaaatgtatttttgggagca
tggtgatacatacttaaaatctcagctattcaagaagtcgagggaggaga
aacagttgtgtctatgaagcaagaactccaagtaggaagtctagagctta
caacagagggagactagaagacgagaaagtatgtcacagcgggactcggg
gacaaagtagaatgaaaaagaaactacaggattgatgttaaaaatagaaa
aatacaatcagggacatccactaaacataaagcaaaggcagcagttagag
aactgatgacattagggtggaagaagctggcagtgagtgcttg
gaattcactttgtagaccaggctggcctcgaactcagaaatccacctgcc
tctgcctctcaagtgctgggattaaaggtgtgcatcaccacgcccggccc
caactctctcttttttaagaaagaaaaaatatttattattattttaaatt
attattattattttcagacagcatctcactgtgtagttctggttggcctt
aacttactatgtagagctggctggttcaaactcacagagatttttctccc
tgagttctgggatcacaggcatgtaccactatacccagctattatgatta
gtattattcaatattttgcttggcttatgtgtgtctgtgtgaatgtatgt
agggtatgctggagtggctgtgggggccagacataggaattggatgtctg
gagttggaggaatagggtgctttgagctgccagacttcagtgctgggaac
tgaactcaagtgtgtggttttaaccactgggtcacgtcctcagagcttat
ttttgtcattttaatctctctctctctctctctctctctctctctctctc
tctctctctctctctata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87031151_87032258
seq2: B6Ng01-245J16.b_47_1139

seq1  GAATTCCCAAAAGCCATTCAAGTGTGTTCTAAATATAACAGGGAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAAAGCCATTCAAGTGTGTTCTAAATATAACAGGGAGAAATG  50

seq1  AAACTGCAAACCCATTTTCAACAAGACCAGAAGGAAACACAAATCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAAACCCATTTTCAACAAGACCAGAAGGAAACACAAATCCCAGA  100

seq1  CCCCCAAACGATGGCAAAGAGATCAGAGCAAGGAGCTCAGGCAAAGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAACGATGGCAAAGAGATCAGAGCAAGGAGCTCAGGCAAAGCTCC  150

seq1  CTTTGCTTCACACAAGGAAAAGATGTGACAGAGAAAATGCGAGCTAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTCACACAAGGAAAAGATGTGACAGAGAAAATGCGAGCTAGTGA  200

seq1  CCTCAGAAGGCCTGTAAAACACACTCCCTGAAGGCAAAGCACACACCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGAAGGCCTGTAAAACACACTCCCTGAAGGCAAAGCACACACCAAA  250

seq1  GGAAGTCTTTGTTGATGGAAGGCCTAGAGTTGGGACCACATTAAAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTCTTTGTTGATGGAAGGCCTAGAGTTGGGACCACATTAAAACAAT  300

seq1  ACACAAGAAGCCTGCTGTCCGTGCCTCACAGAAGTGGTCCCTGTGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGAAGCCTGCTGTCCGTGCCTCACAGAAGTGGTCCCTGTGGCAGC  350

seq1  AGAAAATGCCTTCACACTGGGGAAGCCTTCCTTCTCATGGGTGCTTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGCCTTCACACTGGGGAAGCCTTCCTTCTCATGGGTGCTTAGCT  400

seq1  TTGTTAGCTGCCTAGAAATAAGGTTAACCGACTTCACCTACAACTCTCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGCTGCCTAGAAATAAGGTTAACCGACTTCACCTACAACTCTCTA  450

seq1  ACACAGGAATAACAAAGCCCAGCTTAGAATACCCTCCCCCAACAAAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAATAACAAAGCCCAGCTTAGAATACCCTCCCCCAACAAAACTC  500

seq1  CTAAAAATAGCTGGCACCTAAAAAGCAAACCCATTTAAAGATGTTTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATAGCTGGCACCTAAAAAGCAAACCCATTTAAAGATGTTTATAA  550

seq1  AGAGAAGTCTACACAGCAGCGAAATAATGAAACAACAAAGAAAATTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGTCTACACAGCAGCGAAATAATGAAACAACAAAGAAAATTAGGA  600

seq1  AACCGGAAAATCAAACGTTAGACTAAGATCTCCGACCAGAACACTGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGGAAAATCAAACGTTAGACTAAGATCTCCGACCAGAACACTGATGC  650

seq1  TGGGAGCACAGTGACAGCACAAAGTGTCAGCCAAGAAAAGATAGGGCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGCACAGTGACAGCACAAAGTGTCAGCCAAGAAAAGATAGGGCAGA  700

seq1  AGACAGCTCAGCAGGACAGCAGGAGCACGCACAGACCCTGATCTGATTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTCAGCAGGACAGCAGGAGCACGCACAGACCCTGATCTGATTCC  750

seq1  AGCACTGCAGACAAAGCAAATTACAATTTAAAAATGTATTTTTGGGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTGCAGACAAAGCAAATTACAATTTAAAAATGTATTTTTGGGAGCA  800

seq1  TGGTGATACATACTTAAAATCTCAGCTATTCAAGAAGTCGAGGGAGGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATACATACTTAAAATCTCAGCTATTCAAGAAGTCGAGGGAGGAGA  850

seq1  AACAGTTGTGTCTATGAAGCAAGAACTCCAAGTAGGAAGTCTAGAGCTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTGTGTCTATGAAGCAAGAACTCCAAGTAGGAAGTCTAGAGCTTA  900

seq1  CAACAGAGGGAGACTAGAAGACGAGAAAGTATGTCACAGCGGGACTCGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGGGAGACTAGAAGACGAGAAAGTATGTCACAGCGGGACTCGGG  950

seq1  GACAAAGTAGAAGGAAAAAGAAACTACAGGATTGAAGGTAAAAATAG-AA  999
      |||||||||||| |||||||||||||||||||||| | ||||||||| ||
seq2  GACAAAGTAGAATGAAAAAGAAACTACAGGATTGATGTTAAAAATAGAAA  1000

seq1  AATACAAATCAAGGGACAT-CACTAAAACATAAAAAGCAAAAGGCAAGCA  1048
      ||||| |||| |||||||| |||| ||||||  ||||| |||||| ||||
seq2  AATAC-AATC-AGGGACATCCACT-AAACAT--AAAGC-AAAGGC-AGCA  1043

seq1  GTAAGAGAAAACTGAATGAAACAATTAGGGGTGGAGGGAGGGCTGGGCAG  1098
      || ||||  ||||| ||||    |||| ||||||| | |  ||| |||||
seq2  GTTAGAG--AACTG-ATGA---CATTA-GGGTGGAAGAA--GCT-GGCAG  1083

seq1  TGAGTGCTTG  1108
      ||||||||||
seq2  TGAGTGCTTG  1093