BAC Information

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BAC

Clone NameB6Ng01-245J19
Chromosome7 (Build37)
Map Location 30,481,154 - 30,482,118
singlet/doubletsinglet
Overlap genenone
Upstream geneFbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7, Capn12, Actn4, Eif3s12, Map4k1, Ryr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik
Downstream gene1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568, Zfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245J19.bB6Ng01-245J19.g
ACCGA054451GA054452
length1,218968
definitionB6Ng01-245J19.b B6Ng01-245J19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgttcaataccaaattccttacaaaatgaagtaaaa
ttgttgccagtataggatggctcattatctgtcttaatgagtttaggcga
tcccatagcattaaaggcttgtaaacaatgttcaattacatttctagagg
cctctcccatatgtagagaagcaaaaagaaatcctgaacaaatgtcaata
caaatatgtatatattttaattttcaaaattctgcataatgagttacatc
catctgccaaatatgattaggcataagacctggtggattaactcctaaat
gtggcactggagataatgtaatacatttaggacattgttttacaatcatt
cttgcctgctctttagtgatcttgcatcggagccttaaggtatggctaga
gagatgaaatttatcatgatcgcatctagccaatgcaacaggatctggaa
ttaaggcctctcctattagagctctgttgatgcaatcattgcctgcagct
aaaggtccaggaagaccagaatgagcttgtatatgaccaatataaaacgg
atgttttcgggcaaggatgatgttttgcaattgtgaaaacagagatccta
ctggcatattaaagttaaatgtaccacaagtctccaataagggaatcgat
tgtgcaccatataaactatcagtaaaaatattaaaagcataatgtacaga
ctgaaaaacattcagtactgctgtcagctctgctaactgagctgagaggc
caggagtctctatgactacttgctgattattcataagatatccagctcat
cctttagaggagccatcagtaaaaatcaaaggagcattatacaaaggctg
taaagaagccatattaggaaatatcacctcatgtacatttaaaaattcta
tcaacctatcttgcggatagtgattatctatagttcctataaaccctatt
tgagcaagcaaccaatccgcactgtgctgattcagccaagtatcttggtc
tacgctataaggctgaacatgatatctggctctttgccaaatgaggtagt
ggccgcttcttcagtatgatcatctgagctactgctcatatatgacagga
atatttacgtttaagggaagaattccctccaattgttattccaacattta
agagctttggcccacacaattcttgttaggcttatttgaatctcgtattt
aaagaaaatttatgacga
gaattctcgtgagagagacccatctgagggtaaggggtggatgatctgtc
agtagcagacccactgtggaaggatcctggaggatgttcttctttataga
ctcattgttctctacagtattcttctccttcatggtcaggacctgtgaga
gtctcagagacaaaatggcttttatccaaaagagggctcctccactagat
ccttctgggtaactatatagggcacttggtctacgtgtctgggggatcct
ggcctaaagactcttccttctactgctttgattacctgcaagtcgaaggt
ccatacaggtgtccaccctattccaaaaggcggccattcagaggatcaga
gagtaactaactcatgcatctttactaccagtggttaactaccatgtgaa
ctaccatgaggtagattcagtctgtcccatgtccaaaaataacaacagcc
caagtccaagaacacagagaaagacagtcaacacacagacagttcacccc
tgccacaggcacagaaaccaggttatagcaaaactcagtcggctcctgcc
gatactgtgtcttgccattttgactgcggtaggactcgaacatgcaacct
ttgaataaagagaatcaatacacagacagttagttgccccttgcaacggg
tacagaaaccaggttatagcaagactcagttggctcctcccaatactgtg
tcttgccttttccaaaaggagccaagtcctcacgtctccctcaggggtgg
tgggtgggggcctgaagcattctccagactcccccatggtcacagcatta
aggcacatctgcttgttgcaattgattgcaccagaccagaggttttccag
ccaacaccttgcttgcaagccaaaagagagacaaacactgacagggaggt
gcctgttgccattgctgagctcagtgttctttccctcccatcagtaatag
ttgatgggtgcggggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30481154_30482118
seq2: B6Ng01-245J19.g_68_1035

seq1  GAATTCTCGTGAGAGAGACCCATCTGAGGGTAAGGGGTGGATGATCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGTGAGAGAGACCCATCTGAGGGTAAGGGGTGGATGATCTGTC  50

seq1  AGTAGCAGACCCACTGTGGAAGGATCCTGGAGGATGTTCTTCTTTATAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCAGACCCACTGTGGAAGGATCCTGGAGGATGTTCTTCTTTATAGA  100

seq1  CTCATTGTTCTCTACAGTATTCTTCTCCTTCATGGTCAGGACCTGTGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTGTTCTCTACAGTATTCTTCTCCTTCATGGTCAGGACCTGTGAGA  150

seq1  GTCTCAGAGACAAAATGGCTTTTATCCAAAAGAGGGCTCCTCCACTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGAGACAAAATGGCTTTTATCCAAAAGAGGGCTCCTCCACTAGAT  200

seq1  CCTTCTGGGTAACTATATAGGGCACTTGGTCTACGTGTCTGGGGGATCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGGGTAACTATATAGGGCACTTGGTCTACGTGTCTGGGGGATCCT  250

seq1  GGCCTAAAGACTCTTCCTTCTACTGCTTTGATTACCTGCAAGTCGAAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAAAGACTCTTCCTTCTACTGCTTTGATTACCTGCAAGTCGAAGGT  300

seq1  CCATACAGGTGTCCACCCTATTCCAAAAGGCGGCCATTCAGAGGATCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACAGGTGTCCACCCTATTCCAAAAGGCGGCCATTCAGAGGATCAGA  350

seq1  GAGTAACTAACTCATGCATCTTTACTACCAGTGGTTAACTACCATGTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAACTAACTCATGCATCTTTACTACCAGTGGTTAACTACCATGTGAA  400

seq1  CTACCATGAGGTAGATTCAGTCTGTCCCATGTCCAAAAATAACAACAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATGAGGTAGATTCAGTCTGTCCCATGTCCAAAAATAACAACAGCC  450

seq1  CAAGTCCAAGAACACAGAGAAAGACAGTCAACACACAGACAGTTCACCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCCAAGAACACAGAGAAAGACAGTCAACACACAGACAGTTCACCCC  500

seq1  TGCCACAGGCACAGAAACCAGGTTATAGCAAAACTCAGTCGGCTCCTGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGGCACAGAAACCAGGTTATAGCAAAACTCAGTCGGCTCCTGCC  550

seq1  GATACTGTGTCTTGCCATTTTGACTGCGGTAGGACTCGAACATGCAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTGTGTCTTGCCATTTTGACTGCGGTAGGACTCGAACATGCAACCT  600

seq1  TTGAATAAAGAGAATCAATACACAGACAGTTAGTTGCCCCTTGCAACGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATAAAGAGAATCAATACACAGACAGTTAGTTGCCCCTTGCAACGGG  650

seq1  TACAGAAACCAGGTTATAGCAAGACTCAGTTGGCTCCTCCCAATACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAACCAGGTTATAGCAAGACTCAGTTGGCTCCTCCCAATACTGTG  700

seq1  TCTTGCCTTTTCCAAAAGGAGCCAAGTCCTCACGTCTCCCTCAGGGGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTTTTCCAAAAGGAGCCAAGTCCTCACGTCTCCCTCAGGGGTGG  750

seq1  TGGGTGGGGGCCTGAAGCATTCTCCAGACTCCCCCATGGTCACAGCATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGGGGCCTGAAGCATTCTCCAGACTCCCCCATGGTCACAGCATTA  800

seq1  AGGCACATCTGCTTGTTGCAATTGATTGCACCAGACCAGAGGTTTTCCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACATCTGCTTGTTGCAATTGATTGCACCAGACCAGAGGTTTTCCAG  850

seq1  CCAACACCTTGCTTGCAAGCCAAAAGAGAGACAAACACTGACAAGGAGGT  900
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCAACACCTTGCTTGCAAGCCAAAAGAGAGACAAACACTGACAGGGAGGT  900

seq1  GCCTGTTGCCATTGCTGAGCTCAGTGTTC-TTCCCTCCCATCAGT-ATAG  948
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  GCCTGTTGCCATTGCTGAGCTCAGTGTTCTTTCCCTCCCATCAGTAATAG  950

seq1  TTGAT-GGTGCGGGGGTA  965
      ||||| ||||||||| ||
seq2  TTGATGGGTGCGGGGATA  968