BAC Information

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BAC

Clone NameB6Ng01-245N04
Chromosome7 (Build37)
Map Location 121,484,460 - 121,485,026
singlet/doubletsinglet
Overlap gene4933406I18Rik
Upstream geneBtbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1
Downstream genePde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967, LOC668472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245N04.g
ACCGA054608
length927
definitionB6Ng01-245N04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatacttggtggacaagcggaacatggagggggaggggggacc
actgcaacatttttcaaatgtctcagggatttcttatccctttttattta
ttaagcatctctttctaagatcagtgcctaaactttgagcctttgatctc
ttttgagttctctgtttaatatattgaagctgttgttttttggatatctg
ggatattggggaccatatccggagcattgtgaattaattgttctgttgga
tgagtttctccactgttgacctgagatggctgatttggattgggtattgg
ggcctctggggtcatttcttgaacaagaattaccttatctgtcccttgtt
gatctacattcattagtccagtgtcggcctttgctacaccttctgcatat
tccagatagctgtggccttctgtttttggattttctgaagaaaaggcatt
gttcctaggaatgccttttctacaatctcttttaaaatgaccttgcttgc
cacaatgaaaacatttagcatttaagcctttaaggattatttttctctgt
taaagttgccttcttataatttttaaaatctagtctttttatgggatgcc
atttaaattctttacatttttgtgtgtttctagcatcctctgttattcgt
agtacactaacatgatgagccaaattggttttctaaaaggctttggctta
cttgtttgattttcattatatatagtgtggtaggctttaaccttatttct
tttgtctgtaccttagtgtctttctcaactctgtaatcttttctagtttt
tcttctaatgcctgtatctgggaaagtcttttttaaagaaggcattaaaa
actattatgattattatgattaggaaaatacatgtctgcataatagtaat
tataattgggtaataaagtaccagtct
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121484460_121485026
seq2: B6Ng01-245N04.g_115_681

seq1  CCACTGCAACATTTTTCATTTGTCTCTGGGATTTCTTATCCCTTTTTATT  50
      ||||||||||||||||||  |||||| |||||||||||||||||||||||
seq2  CCACTGCAACATTTTTCAAATGTCTCAGGGATTTCTTATCCCTTTTTATT  50

seq1  TATTAAGCATCTCTTTCTTACATCTGTTCCTATACATTGAGCCTTTGATC  100
      |||||||||||||||||| | ||| || |||| || ||||||||||||||
seq2  TATTAAGCATCTCTTTCTAAGATCAGTGCCTAAACTTTGAGCCTTTGATC  100

seq1  TCTTTTGAGTTCTCTGTTTTATTTATTGAAGCTGTTCTTTTTTTGATATC  150
      ||||||||||||||||||| || ||||||||||||| |||||| ||||||
seq2  TCTTTTGAGTTCTCTGTTTAATATATTGAAGCTGTTGTTTTTTGGATATC  150

seq1  TGGGTTATTAATGTTTATATCCAGAGCATTGTTAATTAATTGTTCTGTTG  200
      |||| ||||   |   |||||| ||||||||| |||||||||||||||||
seq2  TGGGATATTGGGGACCATATCCGGAGCATTGTGAATTAATTGTTCTGTTG  200

seq1  GATGAGTTTCTCCACTGTTGACCTGAGATGGCTGATTTGGATTGGGTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGTTTCTCCACTGTTGACCTGAGATGGCTGATTTGGATTGGGTATT  250

seq1  GGGGCCTCTGGGGTCATTTCTTGAACAAGAATTACCTTATCTGTCCCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCTCTGGGGTCATTTCTTGAACAAGAATTACCTTATCTGTCCCTTG  300

seq1  TTGATCTACATTCATTAGTCCAGTGTCGGCCTTTGCTACACCTTCTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTACATTCATTAGTCCAGTGTCGGCCTTTGCTACACCTTCTGCAT  350

seq1  ATTCCAGATAGCTGTGGCCTTCTGTTTTTGGATTTTCTGAAGAAAAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGATAGCTGTGGCCTTCTGTTTTTGGATTTTCTGAAGAAAAGGCA  400

seq1  TTGTTCCTAGGAATGCCTTTTCTACAATCTCTTTTAAAATGACCTTGCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTAGGAATGCCTTTTCTACAATCTCTTTTAAAATGACCTTGCTT  450

seq1  GCCACAATGAAAACATTTAGCATTTAAGCCTTTAAGGATTATTTTTCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATGAAAACATTTAGCATTTAAGCCTTTAAGGATTATTTTTCTCT  500

seq1  GTTAAAGTTGCCTTCTTATAATTTTTAAAATCTAGTCTTTTTATGGGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGTTGCCTTCTTATAATTTTTAAAATCTAGTCTTTTTATGGGATG  550

seq1  CCATTTAAATTCTTTAC  567
      |||||||||||||||||
seq2  CCATTTAAATTCTTTAC  567