BAC Information

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BAC

Clone NameB6Ng01-246C02
Chromosome7 (Build37)
Map Location 24,960,666 - 24,961,584
singlet/doubletsinglet
Overlap geneZfp114
Upstream geneLOC667616, LOC100043667, LOC667623, LOC100043088, EG628664, Nlrp4e, LOC434261, Nlrp5, LOC100043095, EG622032, LOC667651, LOC100043101, LOC100043103, EG546944, V1rd7, V1rd9, EG545934, V1rd22, LOC384573, EG622222, LOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235
Downstream geneZfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246C02.bB6Ng01-246C02.g
ACCGA054834GA054835
length946930
definitionB6Ng01-246C02.b B6Ng01-246C02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcttagtgtctttgttcatttcacttgctgcaaaaagcaccaag
aataaaacaaccaagatttacttggtttgcaggttacatcaatcaccagg
agacaccaaggtaggaagtaagtacaggaacctgaacttagcaactgaat
caggaaaagaagctcactttactggcttgttacaggacttgctcagccta
ttttcataaacaacacagaacaccttcccaggctgagcacttccccatgg
acataggaactatcatatcaactattatgaagaaatgcactacagacttg
actacaggtaaattgaagaaaacattttcccaactgaggttagtctaccc
agaaaatactttcttctcacctattgacaaagaactaacaatatcggttg
ggcttaatcttgtacaagtcttctggattcttttacaatcctcgtgggtc
aatatatctgttcctcccctgatgtgtccagaaaacattgtttcattgat
gttatcaactacctctggctctaaaattctgctaattcatgttctatgaa
gactgttaaggtgtggtgggagaggtatgacatatccattctaagtcgga
gagcataccaaactaatatcactgcacaatgaccagctgagcgttgctgt
gttaattagtatttgcaagaagcttctctgatgagagctgagagatgcac
tgatatacaggtgtggcaattagtcatcaaggaatgtttgaattctctgt
ccattaaaagaaaacattactattggattccctgctagacatatctgcat
gtaaacaataaaaacagtgctgtttgtgagttctagctcacggaaaggga
ctcagttttgaataagaaactaggtggtttcccccataacattatatcac
tcttgaatcatggggcattatcgcatcaagtcagttaactgccatt
gaattctttttagtcatccttttacactttcctgtgtgcactgcactttg
agcacatgttcccactgtcctctttttttgtttttgtttttgtttcgaga
cagggtttctctgtgcagtcttggctgtcctggaactcactttgtagacc
aggctggcctcgaactcagaaatcctcctgcctctgcctcccaagtgctg
ggattaaaggcgtgtgccaacatgccaggctcccaccgtcctctcttatc
tctcctccttccagtcctttcttctcagcaacttcccctcttccttcatg
cagttcagagaggctcagctgtagagcacttgcccagcatgcagggatcc
tgtttccaatccctagcactgtgggcatgggggaagcaacccgacttacc
tgtaacttggtcattgttctcttctctttgagacaaggcagggctctggg
aagcaagctgggggaggaggggcttcatgagaacactgctaggacagttg
ggccacatggcttcctcagcttctccatcagtcctaagggctgtgtgcgc
tggccaggcttttctttctagtttctactcataggtagtgccatgcctca
ccttgctcacagctggggcttagaaaaggccacatttctctatttctggg
tgctgggcactatttgccttcacaaatctgggctgtgtttagtgggcttc
ccagaaaaacaaatcttttaagaagctctgaactctgacgaatactgcgt
catgattgatcactgctctcggaagggtctgttaaatgtgacagctctta
cacacaattgtttccatacataggaattgatagtccttccgctctgtctc
tcacactaaaagttttaatacctagtaaattaaatgctgtttcatctgcc
cgagccctccccacaaagtctctgtttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_24960666_24961584
seq2: B6Ng01-246C02.g_72_1001 (reverse)

seq1  TGGAAACAGAGACTTTGTGGG--GGGCTCGTGCAGATG-AACAGCATTTA  47
      |||||||||||||||||||||  ||||||| ||||||| |||||||||||
seq2  TGGAAACAGAGACTTTGTGGGGAGGGCTCGGGCAGATGAAACAGCATTTA  50

seq1  ATTTACTAGTATTTAAACCTTTTAGTGTGAGAGACAGAGCGG-AGGACTA  96
      |||||||||   ||||| |||||||||||||||||||||||| |||||||
seq2  ATTTACTAGGTATTAAAACTTTTAGTGTGAGAGACAGAGCGGAAGGACTA  100

seq1  TC-ATTCCTATGTATGGAAACAATTGTGTGTAAGAGCTGTCACA-TTAAC  144
      || ||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCAATTCCTATGTATGGAAACAATTGTGTGTAAGAGCTGTCACATTTAAC  150

seq1  AGACCCTTCCGAGAGCAGTGATCAATCATGACGCAGTATTCGTCAGAGTT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTCCGAGAGCAGTGATCAATCATGACGCAGTATTCGTCAGAGTT  200

seq1  CAGAGCTTCTT-AAAGATTTGTTTTTCTGGGAAGCCCACT-AACACAG-C  241
      ||||||||||| |||||||||||||||||||||||||||| ||||||| |
seq2  CAGAGCTTCTTAAAAGATTTGTTTTTCTGGGAAGCCCACTAAACACAGCC  250

seq1  CAGATTTGTGAAGGC-AATAGTGCCCAGCACCCAGAAATAGAG-AATGTG  289
      ||||||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  CAGATTTGTGAAGGCAAATAGTGCCCAGCACCCAGAAATAGAGAAATGTG  300

seq1  GCCTTTTCTAAGCCCCAGCTGTGAGCAAGGTGAGGCATGGCACTACCTAT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTCTAAGCCCCAGCTGTGAGCAAGGTGAGGCATGGCACTACCTAT  350

seq1  GAGTAGAAACTAGAAAGAAAAGCCTGGCCAGCGCACACAGCCCTTAGGAC  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAAACTAGAAAGAAAAGCCTGGCCAGCGCACACAGCCCTTAGGAC  400

seq1  TGATGGAGAAGCTGAGGAAGCCATGTGGCCCAACTGTCCTAGCAGTGTTC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGAGAAGCTGAGGAAGCCATGTGGCCCAACTGTCCTAGCAGTGTTC  450

seq1  TCATGAAGCCCCTCCTCCCCCAGCTTGCTTCCCAGAGCCCTGCCTTGTCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAGCCCCTCCTCCCCCAGCTTGCTTCCCAGAGCCCTGCCTTGTCT  500

seq1  CAAAGAGAAGAGAACAATGACCAAGTTACAGGTAAGTCGGGTTGCTTCCC  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGAAGAGAACAATGACCAAGTTACAGGTAAGTCGGGTTGCTTCCC  550

seq1  CCATGCCCACAGTGCTAGGGATTGGAAACAGGATCCCTGCATGCTGGGCA  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCCCACAGTGCTAGGGATTGGAAACAGGATCCCTGCATGCTGGGCA  600

seq1  AGTGCTCTACAGCTGAGCCTCTCTGAACTGCATGAAGGAAGAGGGGAAGT  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCTACAGCTGAGCCTCTCTGAACTGCATGAAGGAAGAGGGGAAGT  650

seq1  TGCTGAGAAGAAAGGACTGGAAGGAGGAGAGATAAGAGAGGACGGTGGGA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAAGAAAGGACTGGAAGGAGGAGAGATAAGAGAGGACGGTGGGA  700

seq1  GCCTGGCATGTTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCATGTTGGCACACGCCTTTAATCCCAGCACTTGGGAGGCAGAGG  750

seq1  CAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCA  800

seq1  GGACAGCCAAGACTGCACAGAGAAACCCTGTCTCGAAACAAAAACAAAAA  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGCCAAGACTGCACAGAGAAACCCTGTCTCGAAACAAAAACAAAAA  850

seq1  CAAAAAAAGAGGACAGTGGGAACATGTGCTCAAAGTGCAGTGCACACAGG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAGAGGACAGTGGGAACATGTGCTCAAAGTGCAGTGCACACAGG  900

seq1  AAAGTGTAAAAGGATGACTAAAAAGAATTC  919
      ||||||||||||||||||||||||||||||
seq2  AAAGTGTAAAAGGATGACTAAAAAGAATTC  930