BAC Information

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BAC

Clone NameB6Ng01-246E11
Chromosome7 (Build37)
Map Location 33,160,261 - 33,161,427
singlet/doubletsinglet
Overlap genenone
Upstream geneEG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386
Downstream geneLOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246E11.bB6Ng01-246E11.g
ACCGA054933GA054934
length1,1511,181
definitionB6Ng01-246E11.b B6Ng01-246E11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaggcaggcagttgcccgcagcttccagaagctgctttttta
ggtgagagaaataaaagggtttaataaaagggatttaataattaggcaga
tggccgcagttggaaactgcatcaggcaggaggaaattggatttgaaact
ctaccagggacagagagaaaatacctgaattccctcttgtgtgcatgctg
gccattgtcttttttctgagtatccatcttatgtttccagaaatgaacat
gtgctccttgtgttggtttgttgtctgtgtttcatcccgtgtctctgaaa
catggcacagtctgagtttaaatccgcctgagttaggtttttgtggtgtt
tataaatgatggggttctctgaaatatgtgcttgttatttgcagctttcc
cttcagactgtaaggaccagaggactgtggtcagcagatgtgctaggaag
actgtcaccttaccaggggattccctgggaagtagggagagccagagaca
tctggaagtctctggagatcagtcagagtgaccaggttttgtttattaaa
tggaagctttcctttctaattcttttgcctcctcgtggaaaaccagaaag
ggttgcacgtatctcaatttgttggtttctgttttgtgtgttttgtgtat
gtgtttagtgctatgtgaaaagttagaaaagtgctagtgtaactggaaaa
gccctactgggagatgattgcacatgcagctcttaaaggggcaggcagcc
ttttgcttgtagtagaaagttagcttaaaattgataactcagagttggag
tcattctaaacaatatgtggcgggagcaaacacaggaaaacaggtcttaa
aagatacttcaaaagagggataatatttgggccaggactctggcagagtg
ctcagattgagaaatgtttgtactttggtagacatggaaactcagctcga
agcagcctcaggaggtttgtgtggcatttcttttgactcacaaactgtaa
ctggggaagtcctgggacctcacctctcaggcttcagggagatccttgaa
aatcagagcaatattctttatacttaggttttagctatactagaaatcac
gtccttgagaatctagaagaattgattgccctcaaattccaggagagtgt
t
gaattccagttttttatgttgtttgtatatattggaaattagtccgctat
cagatttagggttggtaaacatcctttcccaatctcttggtggccttttt
gtcttattgacagtgtcttttgctttacagaagctttgcaattttatgag
gtcctatttgttgattctcgatcttacaccacactacattgctgttctgg
tcaggactttttctcctgtgctcatatctttgcggcttttcctggctttt
tcctctataaatttcagtgtctctggttttatgtggaggtctttgatcca
cttagacttgaactttttacaagaagacaagaatggatcaattcgaattc
ttctacatgataaccactagtttttcagcaccatttgttaaaaatgttgt
ctttttttccactggatggctttagttcccttatcaaagttcaagtgacc
ataggtgtgtgaattcatttctgggtcttcaattgtatttcattgatcta
gctgtctgtcgctggaccagtactatgcagtttttttttcacaattgctc
tgtatactgcttaatatcaagtgtgttgatttcaccaaggttcttttatt
gttgagactggtttttgctatcctaggtttattattattccagatgaatt
ttcaaattgccctttctaactcagtgaagaattgagttgcagttttgatg
gggagtgcattaaatgtgtataatgcttttggcagtctagccattttgac
tatattaatcctgccaatccatgagcataagagatctttccatcttctga
gatcttcttcaatttctttcttcagaaatttgaacttgttatcatacaga
tgttttacttccttagttagagtcacacccaagtattttatattatttgt
gactattgtgaagggtggtgtttctctaatttttttctcagtctgtttat
ccttgtgtattgaaaagtcagtgatttgttgagttaatgtatatcagcta
cttcactgatctgtttattcaaggttagagttctctttgtgaaatttagg
gtcacatacataaacctatctatcattctgaaggatgatatttgaacttc
ttcctgtcaatgtatccttgatctgcgttgtgtcgataggctctgccggt
aattacgactcacgtatatcgtgactagcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33160261_33161427
seq2: B6Ng01-246E11.b_42_1192 (reverse)

seq1  AACA-TCTCCTGGAATATTTTGAAGCAAATCAATTTTTCTTTCTTAGATT  49
      |||| ||||||||||   ||||| |  |||||||| |||     ||||||
seq2  AACACTCTCCTGGAA---TTTGAGGGCAATCAATTCTTC-----TAGATT  42

seq1  CTCAGGACCGTGATTTTCTAGTATAGCTAAAAACCTAAGTATTAAAAGAT  99
      |||| |  ||||| |||||||||||||| |||||||||||| ||||  ||
seq2  CTCAAGGACGTGA-TTTCTAGTATAGCT-AAAACCTAAGTA-TAAAGAAT  89

seq1  ATTGCCTCTGAATTTTCAGGAATCTTCCCTGAAGGCCTGGAGAGGTGAGG  149
      |||| ||||| ||||||| | ||| |||||||| |||| |||||||||||
seq2  ATTG-CTCTG-ATTTTCAAGGATC-TCCCTGAA-GCCT-GAGAGGTGAGG  134

seq1  TCCCAGGAACTTCCCCAGTTACAGTTTGTGAGTCAAAAGAAATGCCACAC  199
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGG-ACTTCCCCAGTTACAGTTTGTGAGTCAAAAGAAATGCCACAC  183

seq1  AAACCTCCCTGAGGCTGCTTCGAGCTGAG-TTCCATGTCTACCAAAGTAC  248
      |||||| |||||||||||||||||||||| ||||||||||||||||||||
seq2  AAACCT-CCTGAGGCTGCTTCGAGCTGAGTTTCCATGTCTACCAAAGTAC  232

seq1  AAACATTTCTCAATCTGAGCACTCTGCCAGAGTCCTGGCCCAAATATTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTTCTCAATCTGAGCACTCTGCCAGAGTCCTGGCCCAAATATTAT  282

seq1  CCCTCTTTTGAAGTATCTTTTAAGACCTGTTTTCCTGTGTTTGCTCCCGC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTTTTGAAGTATCTTTTAAGACCTGTTTTCCTGTGTTTGCTCCCGC  332

seq1  CACATATTGTTTAGAATGACTCCAACTCTGAGTTATCAATTTTAAGCTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTGTTTAGAATGACTCCAACTCTGAGTTATCAATTTTAAGCTAA  382

seq1  CTTTCTACTACAAGCAAAAGGCTGCCTGCCCCTTTAAGAGCTGCATGTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTACTACAAGCAAAAGGCTGCCTGCCCCTTTAAGAGCTGCATGTGC  432

seq1  AATCATCTCCCAGTAGGGCTTTTCCAGTTACACTAGCACTTTTCTAACTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTCCCAGTAGGGCTTTTCCAGTTACACTAGCACTTTTCTAACTT  482

seq1  TTCACATAGCACTAAACACATACACAAAACACACAAAACAGAAACCAACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATAGCACTAAACACATACACAAAACACACAAAACAGAAACCAACA  532

seq1  AATTGAGATACGTGCAACCCTTTCTGGTTTTCCACGAGGAGGCAAAAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATACGTGCAACCCTTTCTGGTTTTCCACGAGGAGGCAAAAGAA  582

seq1  TTAGAAAGGAAAGCTTCCATTTAATAAACAAAACCTGGTCACTCTGACTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGGAAAGCTTCCATTTAATAAACAAAACCTGGTCACTCTGACTG  632

seq1  ATCTCCAGAGACTTCCAGATGTCTCTGGCTCTCCCTACTTCCCAGGGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAGAGACTTCCAGATGTCTCTGGCTCTCCCTACTTCCCAGGGAAT  682

seq1  CCCCTGGTAAGGTGACAGTCTTCCTAGCACATCTGCTGACCACAGTCCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGGTAAGGTGACAGTCTTCCTAGCACATCTGCTGACCACAGTCCTC  732

seq1  TGGTCCTTACAGTCTGAAGGGAAAGCTGCAAATAACAAGCACATATTTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTTACAGTCTGAAGGGAAAGCTGCAAATAACAAGCACATATTTCA  782

seq1  GAGAACCCCATCATTTATAAACACCACAAAAACCTAACTCAGGCGGATTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCCCATCATTTATAAACACCACAAAAACCTAACTCAGGCGGATTT  832

seq1  AAACTCAGACTGTGCCATGTTTCAGAGACACGGGATGAAACACAGACAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCAGACTGTGCCATGTTTCAGAGACACGGGATGAAACACAGACAAC  882

seq1  AAACCAACACAAGGAGCACATGTTCATTTCTGGAAACATAAGATGGATAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACACAAGGAGCACATGTTCATTTCTGGAAACATAAGATGGATAC  932

seq1  TCAGAAAAAAGACAATGGCCAGCATGCACACAAGAGGGAATTCAGGTATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAAAGACAATGGCCAGCATGCACACAAGAGGGAATTCAGGTATT  982

seq1  TTCTCTCTGTCCCTGGTAGAGTTTCAAATCCAATTTCCTCCTGCCTGATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGTCCCTGGTAGAGTTTCAAATCCAATTTCCTCCTGCCTGATG  1032

seq1  CAGTTTCCAACTGCGGCCATCTGCCTAATTATTAAATCCCTTTTATTAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCCAACTGCGGCCATCTGCCTAATTATTAAATCCCTTTTATTAAA  1082

seq1  CCCTTTTATTTCTCTCACCTAAAAAAGCAGCTTCTGGAAGCTGCGGGCAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTTATTTCTCTCACCTAAAAAAGCAGCTTCTGGAAGCTGCGGGCAA  1132

seq1  CTGCCTGCCTGTTGAATTC  1167
      |||||||||||||||||||
seq2  CTGCCTGCCTGTTGAATTC  1151