BAC Information

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BAC

Clone NameB6Ng01-246O18
Chromosome7 (Build37)
Map Location 49,501,764 - 49,502,866
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898
Downstream geneGprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246O18.bB6Ng01-246O18.g
ACCGA055401GA055402
length1,1091,137
definitionB6Ng01-246O18.b B6Ng01-246O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacataatacctgacacactaaattaagagaagataaattgggg
aactcccttgaaatctttggtacaagggacaactttctgaacagaacaac
aatagcctaggcactaaatcaacaactaataaatttgagctcatgtaata
taaatgcttttgctaggctaagaacattatcaataggataaaacagccac
ctggggaataagaaaggtacattcaacaaaggtctaatatccaaaattta
caaggaactcaagaaattagatgtcaacaagcgaaataagccaattaaaa
aatgggatactgagctaaacagagaatgctcaatagtgggatctcaaata
aaataataaattattggaagaaaagtgaaataaaatgttttcaaagaaat
actttttataaaatttttctgtgtctagtaatatgcaatctgatttatga
cttacatgttatatatggttgatttatctttttctgttcctattcaatat
cctagcttaattctcatcatctagttccctaaattcatttacactataca
ggaattattttcactaattctttttgatacacgaattttgtattgtgaac
atcctggccaagaactatcaatgttagtcaggtgtgttggtgcacacctt
taatcctagcacttgggaggcaggggcaggcggatttctgagtttgaggc
cagcctggtctacaaagtgagttccaggacagccagggctacacagagat
accttgtctcaaaaaaccaaaaaataaataaacaaataaataaaaaataa
aaaaataaaagaactagcaatgttttcactcaaatgtgtatagtttcagt
agttcaagtacatgaagatatctctagtttatcattcaacaattcaataa
tgcagttacatgacattgtttcatttttcctatttgtcacaagacatgat
ttaatattaatctatgtaataagttgtcaaacattctgttaatgtgttta
tatgtcatagacacattggtcttgatgtctaatgatatatccacattctt
atgttaaaatcatcttgttatgggtgacatttattatgaattcataagaa
cccatgtgt
gaattccaaggcaaggaatcaggagtgggtgggtgggcaaaggagcaacg
tgatagaagcaagtataggagggatgggatatgggattactggaggggaa
tccaaaaaggaggataacatctgaaatgtaaataaagaaaatatccaaaa
aaaaaagaaaagaaaaaaatggttgttgaaagagtgagcatgggataaac
ctaggccccctgcacatatatagctgaagtgcatttttgtcttcatgtgg
atcctccaagaactgaatctggggttatcccaccactccatgtttgatga
gttgtgatgtgttatcttgagcagggggacttggctgtcagtttttgcag
agcaacctattttctcgtcgaaagcctgggtttttttggggggggggatt
tcactgcacagtttaaaccatcaactcatattcatgaaactcaatcccag
tactcatggcttcatttgttgaccagagatggccagtggatttctatttc
cctcactatatggaaacttcattaggatcaccttccaatattataagatg
tttccattgcatcaggttttcatgttgatcatacaatgccatttaattct
agctgtccttgttcttattcacttccccaactccatttcaccgcccacct
cgtattcatcccccttggctcagtccacccagaaattctctcttcacgtg
gagatctatgggaatgccaagtcctttcctctattcctaaacactacacc
atgtatctttactatactctatcaaacagctaatacaaatatttaagtaa
tacatacaatatttaactttctaggatttgctgtgccttcttgggataat
ctttttctatttccataatatttgccctgccaaattttcattatatcacc
ttttaaccctttgaatatcaatactccattatgtaacatgccaccatatt
ttggttgtattgggttctttccattgggggaaacatcaaggcatttttcc
agtgtcttgtttttggtttgtttcgtttttttgtgagttagagcaccaat
gcacattgttaatcaaagggcctcatgggtagggatgatagccatacctt
tgaatatatatatccccaagaagcagctcaagctggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49501764_49502866
seq2: B6Ng01-246O18.b_65_1159 (reverse)

seq1  ACACATGGGTTTCTTATGAAATTTCAATAATAAATGTCACCCATA--CAG  48
      ||||||||| ||||||||||  ||| |||||||||||||||||||   ||
seq2  ACACATGGG-TTCTTATGAA--TTC-ATAATAAATGTCACCCATAACAAG  46

seq1  ATGATTTTTAAACATTAAAGAATGTGATAATAATCATTAAGACATCAAGA  98
      ||||||||  |||||  |||||||||   || |||||| |||||||||||
seq2  ATGATTTT--AACAT--AAGAATGTGGATAT-ATCATT-AGACATCAAGA  90

seq1  CCAATGTGTCTATGACATATAAACAACATTAACAGAATGTTTGAC-ACTT  147
      |||||||||||||||||||||||| |||||||||||||||||||| ||||
seq2  CCAATGTGTCTATGACATATAAAC-ACATTAACAGAATGTTTGACAACTT  139

seq1  ATTACATAGATTAATATTAAATCATGTCTTGTGACAAATAGGAAAAATGA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATAGATTAATATTAAATCATGTCTTGTGACAAATAGGAAAAATGA  189

seq1  AACAATGTCATGTAACTGCATTATTGAATTGTTGAATGATAAACTAGAGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTCATGTAACTGCATTATTGAATTGTTGAATGATAAACTAGAGA  239

seq1  TATCTTCATGTACTTGAACTACTGAAACTATACACATTTGAGTGAAAACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCATGTACTTGAACTACTGAAACTATACACATTTGAGTGAAAACA  289

seq1  TTGCTAGTTCTTTTATTTTTTTATTTTTTATTTATTTGTTTATTTATTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGTTCTTTTATTTTTTTATTTTTTATTTATTTGTTTATTTATTTT  339

seq1  TTGGTTTTTTGAGACAAGGTATCTCTGTGTAGCCCTGGCTGTCCTGGAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTTGAGACAAGGTATCTCTGTGTAGCCCTGGCTGTCCTGGAAC  389

seq1  TCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCCCTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCCCTG  439

seq1  CCTCCCAAGTGCTAGGATTAAAGGTGTGCACCAACACACCTGACTAACAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCAAGTGCTAGGATTAAAGGTGTGCACCAACACACCTGACTAACAT  489

seq1  TGATAGTTCTTGGCCAGGATGTTCACAATACAAAATTCGTGTATCAAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTTCTTGGCCAGGATGTTCACAATACAAAATTCGTGTATCAAAAA  539

seq1  GAATTAGTGAAAATAATTCCTGTATAGTGTAAATGAATTTAGGGAACTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTGAAAATAATTCCTGTATAGTGTAAATGAATTTAGGGAACTAG  589

seq1  ATGATGAGAATTAAGCTAGGATATTGAATAGGAACAGAAAAAGATAAATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAGAATTAAGCTAGGATATTGAATAGGAACAGAAAAAGATAAATC  639

seq1  AACCATATATAACATGTAAGTCATAAATCAGATTGCATATTACTAGACAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATATATAACATGTAAGTCATAAATCAGATTGCATATTACTAGACAC  689

seq1  AGAAAAATTTTATAAAAAGTATTTCTTTGAAAACATTTTATTTCACTTTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTTTATAAAAAGTATTTCTTTGAAAACATTTTATTTCACTTTT  739

seq1  CTTCCAATAATTTATTATTTTATTTGAGATCCCACTATTGAGCATTCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATAATTTATTATTTTATTTGAGATCCCACTATTGAGCATTCTCT  789

seq1  GTTTAGCTCAGTATCCCATTTTTTAATTGGCTTATTTCGCTTGTTGACAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGCTCAGTATCCCATTTTTTAATTGGCTTATTTCGCTTGTTGACAT  839

seq1  CTAATTTCTTGAGTTCCTTGTAAATTTTGGATATTAGACCTTTGTTGAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCTTGAGTTCCTTGTAAATTTTGGATATTAGACCTTTGTTGAAT  889

seq1  GTACCTTTCTTATTCCCCAGGTGGCTGTTTTATCCTATTGATAATGTTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTTTCTTATTCCCCAGGTGGCTGTTTTATCCTATTGATAATGTTCT  939

seq1  TAGCCTAGCAAAAGCATTTATATTACATGAGCTCAAATTTATTAGTTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTAGCAAAAGCATTTATATTACATGAGCTCAAATTTATTAGTTGTT  989

seq1  GATTTAGTGCCTAGGCTATTGTTGTTCTGTTCAGAAAGTTGTCCCTTGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAGTGCCTAGGCTATTGTTGTTCTGTTCAGAAAGTTGTCCCTTGTA  1039

seq1  CCAAAGATTTCAAGGGAGTTCCCCAATTTATCTTCTCTTAATTTAGTGTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGATTTCAAGGGAGTTCCCCAATTTATCTTCTCTTAATTTAGTGTG  1089

seq1  TCAGGT  1103
      ||||||
seq2  TCAGGT  1095