BAC Information

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BAC

Clone NameB6Ng01-247P22
Chromosome7 (Build37)
Map Location 32,527,996 - 32,529,011
singlet/doubletsinglet
Overlap genenone
Upstream geneSbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305
Downstream geneEG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247P22.bB6Ng01-247P22.g
ACCGA056183GA056184
length1,0561,048
definitionB6Ng01-247P22.b B6Ng01-247P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttagggccacttacatatactatcatatcatttgcaaatagtga
tattttgacttcttcctttccaatttgtatcccctttatctccttttgtt
gtcgaattgttgtggctaggacttcaagtactatattgaatagataaaga
gaaagtgggcagccttgtctattccgtgatttttgtggggttcttttgag
tatctctctttattaatgtttcttacccatttgctgtatattgcttttat
tatgtgtagggatgggccttgaattcttgatctcttcaaggctttttatc
ttgaacgggtgtggattttgtcaaatgttgttcagcatctaatgagatga
tcattagtttttgtctttaagtttttttatatagtggattacgttgatgg
atttccatatattaaaccatccatgcatcccttggatgaagcctctttag
ttatgatagatgatcattttgttggattcttggatttggtttgcgatgat
tttattgagtatttttgcattgatattcataagggaaattggtctgaagt
tctctttcttccttggttctttgtgtgctttaggtatcaaagtaattgtg
gcttcatagaatgaactgggtagagtaccttctctttctattttgtgaaa
tagtttgaggagtgttggaattaggtctgctttgaaggtctgacagaatt
ctgcaataaaccattctgctcctgggctttttttggctgggagactattg
atgagtgctcttatatcctaaggtgaaatggaactgttttgatccttaat
ctgatcctgatttcactttggtacctggtatctatctaggaagtggtcga
tttcatccaagttttctagttttattgagtatagcctttttagtagtatc
tgatgatgttttagatttcctgaaattctgttgttatgtttcagttttat
ttttgattttgttaattatgaatactatccctggtgcttctaatgggtaa
gggtttatctatggtggttgattttctcaaagaaccaaacctcctggttt
cggtag
gaattctctttttctttttcctcctctcccatggctgatggaagtgcatc
cttgtttcccgcttatacccagccttttgtatatcagtttttattaacaa
atcagagaataaattgttcaataacaaacctggtctcaaataattagttg
aagactgttcagatagctcagtgattaaaggtgcactgattgaaggtgaa
cacctgagttgaaatttcagaacccacctggtagaagaaaagaagtaagt
tctctaaattgtaatttaaccttccacacacacacacacacacacacaca
cacagcttgatacctctgtctatacacagtcacacacaaacaagcacaca
aacacatgaacacacacctacaaatgtctgtgaaaactggcatcagtaag
cattaataagctcctaatggaaaaatatgaagcaatttgacaaacaaact
aaataacacatgagattgtactataatggtgaaataacctataaacccat
gcacatgtgaattgctgcatggcaggtaaatgaacattactgaacctgac
gggacctgcgggacccagaggtctctccactctgcagaaaccctacaaac
caggacctcagaatcatgggtaagtggaacagaacatcagcaccaaagaa
tcccagagggtcttgtgccagcaggaagagggacaaaggaaccctgaact
accagaggctgggattcattctggttggcgccagcccggccatcttcttt
ttgaacccagtggagggagccaaggacccagaggactctccacaccacag
gatccatatcacacccaaaatccaggcatcacgggactcaggaagtagat
tggagctccagacttctggacacctgccctgcataaaggagagcttgaat
gcagagagtgctctgaccactgtgactcagtgagagttgggactcccagg
acagctgacagaggctaacagaatcaaagagaacaagcttcagccagaga
cagctatatcttctaacaccagagatacatattgctaaggcaagcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32527996_32529011
seq2: B6Ng01-247P22.g_103_1114 (reverse)

seq1  TATGCTTGCCTTTAGCAATATTGTAATCTCTGGTGTTAGAAGATATAGCT  50
      |||||||||| ||||||||| ||| |||||||||||||||||||||||||
seq2  TATGCTTGCC-TTAGCAATA-TGT-ATCTCTGGTGTTAGAAGATATAGCT  47

seq1  GTCTCTGGCTGAAGCTTGTTCCTCCTTTGATTCTGTTAGCCTCTGTCAGC  100
      |||||||||||||||||||||   ||||||||||||||||||||||||||
seq2  GTCTCTGGCTGAAGCTTGTTC--TCTTTGATTCTGTTAGCCTCTGTCAGC  95

seq1  TGTCCTGGGAGT-CCAACTCTCACCTGAGTCACAGTGGTCAGAGCACTCT  149
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TGTCCTGGGAGTCCCAACTCTCA-CTGAGTCACAGTGGTCAGAGCACTCT  144

seq1  CTGCATTCAAGCTCTCC-TTATGCAGGGCAGGTGTCCAGAAGTCTGGAGC  198
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTGCATTCAAGCTCTCCTTTATGCAGGGCAGGTGTCCAGAAGTCTGGAGC  194

seq1  TCCAATCTACTTCCTGAGTCCCGTGATGCCTGGATTTTGGGTGTGATATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATCTACTTCCTGAGTCCCGTGATGCCTGGATTTTGGGTGTGATATG  244

seq1  GATCCTGTGGTGTGGAGAGTCCTCTGGGTCCTTGGCTCCCTCCACTGGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTGTGGTGTGGAGAGTCCTCTGGGTCCTTGGCTCCCTCCACTGGGT  294

seq1  TCAAAAAGAAGATGGCCGGGCTGGCGCCAACCAGAATGAATCCCAGCCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAAGATGGCCGGGCTGGCGCCAACCAGAATGAATCCCAGCCTC  344

seq1  TGGTAGTTCAGGGTTCCTTTGTCCCTCTTCCTGCTGGCACAAGACCCTCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGTTCAGGGTTCCTTTGTCCCTCTTCCTGCTGGCACAAGACCCTCT  394

seq1  GGGATTCTTTGGTGCTGATGTTCTGTTCCACTTACCCATGATTCTGAGGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTCTTTGGTGCTGATGTTCTGTTCCACTTACCCATGATTCTGAGGT  444

seq1  CCTGGTTTGTAGGGTTTCTGCAGAGTGGAGAGACCTCTGGGTCCCGCAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTGTAGGGTTTCTGCAGAGTGGAGAGACCTCTGGGTCCCGCAGG  494

seq1  TCCCGTCAGGTTCAGTAATGTTCATTTACCTGCCATGCAGCAATTCACAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTCAGGTTCAGTAATGTTCATTTACCTGCCATGCAGCAATTCACAT  544

seq1  GTGCATGGGTTTATAGGTTATTTCACCATTATAGTACAATCTCATGTGTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGGTTTATAGGTTATTTCACCATTATAGTACAATCTCATGTGTT  594

seq1  ATTTAGTTTGTTTGTCAAATTGCTTCATATTTTTCCATTAGGAGCTTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGTTTGTTTGTCAAATTGCTTCATATTTTTCCATTAGGAGCTTATT  644

seq1  AATGCTTACTGATGCCAGTTTTCACAGACATTTGTAGGTGTGTGTTCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTACTGATGCCAGTTTTCACAGACATTTGTAGGTGTGTGTTCATG  694

seq1  TGTTTGTGTGCTTGTTTGTGTGTGACTGTGTATAGACAGAGGTATCAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTGTGCTTGTTTGTGTGTGACTGTGTATAGACAGAGGTATCAAGC  744

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAGGTTAAATTACAATTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAAGGTTAAATTACAATTTA  794

seq1  GAGAACTTACTTCTTTTCTTCTACCAGGTGGGTTCTGAAATTTCAACTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTACTTCTTTTCTTCTACCAGGTGGGTTCTGAAATTTCAACTCA  844

seq1  GGTGTTCACCTTCAATCAGTGCACCTTTAATCACTGAGCTATCTGAACAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCACCTTCAATCAGTGCACCTTTAATCACTGAGCTATCTGAACAG  894

seq1  TCTTCAACTAATTATTTGAGACCAGGTTTGTTATTGAACAATTTATTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAACTAATTATTTGAGACCAGGTTTGTTATTGAACAATTTATTCTC  944

seq1  TGATTTGTTAATAAAAACTGATATACAAAAGGCTGGGTATAAGCGGGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTGTTAATAAAAACTGATATACAAAAGGCTGGGTATAAGCGGGAAA  994

seq1  CAAGGATGCACTTCCATC  1016
      ||||||||||||||||||
seq2  CAAGGATGCACTTCCATC  1012