BAC Information

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BAC

Clone NameB6Ng01-248K04
Chromosome7 (Build37)
Map Location 136,834,404 - 136,950,630
singlet/doubletdoublet
Overlap genenone
Upstream geneInpp5f, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a, Brwd2
Downstream geneLOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2, LOC619876, Btbd16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248K04.bB6Ng01-248K04.g
ACCGA056660GA056661
length1,106566
definitionB6Ng01-248K04.b B6Ng01-248K04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(136,949,532 - 136,950,630)(136,834,404 - 136,834,974)
sequence
gaattccctccatagctgctgaatgtattgctctcctaactctattcaat
ttgcaactattatttagagagttgtttgatgtatttggtccagcttttcc
acaaccattaaaattaaagcccagtaatgatttaattttaaatagtgtgc
cttctgtcccattggccccataatacattgctaggatctttattctgttt
ctttataattaacctcccagttttatcttatttgctggtttacattcagg
ttatagattgaaaagaagacttgacattcattcaggagcgtggtagacat
gagagagctcctgccacactgagatacattgttactgaaagactgtgtcc
tacatggcagtgtgcttgggtgctttcccattttgtgtttctattgatgt
attgctcaagggtgtgttagcagcatttcttacttctatggacatttgta
cagcaaacagttccccctttcacaaatcaaacaaaattcatattacattg
gcttatacatggaaagaaaatttgttgatgtgcacaattggaaagtacag
gaatatgtcacatcgcatgtgcttgacccaagagctcatctaatgacctc
aggacccagtttccctctttgtttgagagcttcattctcagcagatcctc
atctcctgggcaacaagccagctggctacccaagcctcactttggtccag
gatcaaacctagtagcagtatgaatgactatatattttttttctccttaa
aacttgattttcattggctttgaatgcaatagttcttataccctaaatcc
accactgtgcaagaccagtgtgaccctctgataagcaggtatgagacact
ggtctattggatgcaggcttggagttggctccactggtatatgtgcattg
aagatgccaggggagaagcagtttctcaagggactacttctaattatttc
aataggagaaagttattttgactgtggtaggctacacaacaagtgcttat
ttatgacatgcctactactgtattgattgggaggttggttctttgctagt
acttgtctaagattcaaaggtccctgaatgctgtcagtgttctttgggtc
attagc
agagggcaccttcttatctgaagaaggtcagcagtgaagctggcccaggg
atcacttcagaatgacttcccagagccagctgtctactgggttagtgtcc
attcatatctagcttttaagtactaaccatgccctcgcctgaggctcagc
ccagggtctgggagacgaaggacagtagttcctgttttttcatgtggtct
ggtgacaaaggcacatgcactttattttaggacaagacaaacaccaaagg
gcagtgttggactgcaggggggaccaggagaccttactgactcgtcggca
ataaagtttgtgtggtaggctttgatgactactatgggcatcctctgtat
gtgtgtgtggggggcggggggatgttactctgctttcaggggagtctctg
acttcttttttataacttgtggtgaatggagccaggtcttcttgacccga
tactgagggataaagagggacaaaggagctccaggagatggcagagcgaa
gccagggttcttgggagtcaagagagatcttggggtattgttctggttgt
ggggaggagaaggatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136949532_136950630
seq2: B6Ng01-248K04.b_47_1152 (reverse)

seq1  GCTAATGA-CCAAAG-ACACTGACAGCATTCA-GGACCTTTGAATCTTAA  47
      |||||||| |||||| |||||||||||||||| ||||||||||||||| |
seq2  GCTAATGACCCAAAGAACACTGACAGCATTCAGGGACCTTTGAATCTT-A  49

seq1  GAC-AGTACTAGCAAAGAACCAACCT-CCAATCAATACAGTAGTAGGCAT  95
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  GACAAGTACTAGCAAAGAACCAACCTCCCAATCAATACAGTAGTAGGCAT  99

seq1  GTCAT-AATAAGCACTTGTTGTGTAGCCTACCACAGTC-AAATAACTTTT  143
      ||||| |||||||||||||||||||||||||||||||| ||||||| |||
seq2  GTCATAAATAAGCACTTGTTGTGTAGCCTACCACAGTCAAAATAAC-TTT  148

seq1  CTCCTATTGAAATAATTAG-AGTAGTCCCTTGAGAAACTGCTTCTCCCCT  192
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCCTATTGAAATAATTAGAAGTAGTCCCTTGAGAAACTGCTTCTCCCCT  198

seq1  GGCATCTTCAATGCACATATACCAGTGGAGCCAACTCCAAGCCTGCATCC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTTCAATGCACATATACCAGTGGAGCCAACTCCAAGCCTGCATCC  248

seq1  AATAGACCAGTGTCTCATACCTGCTTATCAGAGGGTCACACTGGTCTTGC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACCAGTGTCTCATACCTGCTTATCAGAGGGTCACACTGGTCTTGC  298

seq1  ACAGTGGTGGATTTAGGGTATAAGAACTATTGCATTCAAAGCCAATGAAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGGTGGATTTAGGGTATAAGAACTATTGCATTCAAAGCCAATGAAA  348

seq1  ATCAAGTTTTAAGGAG-AAAAAAATATATAGTCATTCATACTGCTACTAG  391
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCAAGTTTTAAGGAGAAAAAAAATATATAGTCATTCATACTGCTACTAG  398

seq1  GTTTGATCCTGGACCAAAGTGAGGCTTGGGTAGCCAGCTGGCTTGTTGCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATCCTGGACCAAAGTGAGGCTTGGGTAGCCAGCTGGCTTGTTGCC  448

seq1  CAGGAGATGAGGATCTGCTGAGAATGAAGCTCTCAAACAAAGAGGGAAAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATGAGGATCTGCTGAGAATGAAGCTCTCAAACAAAGAGGGAAAC  498

seq1  TGGGTCCTGAGGTCATTAGATGAGCTCTTGGGTCAAGCACATGCGATGTG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTGAGGTCATTAGATGAGCTCTTGGGTCAAGCACATGCGATGTG  548

seq1  ACATATTCCTGTACTTTCCAATTGTGCACATCAACAAATTTTCTTTCCAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTCCTGTACTTTCCAATTGTGCACATCAACAAATTTTCTTTCCAT  598

seq1  GTATAAGCCAATGTAATATGAATTTTGTTTGATTTGTGAAAGGGGGAACT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGCCAATGTAATATGAATTTTGTTTGATTTGTGAAAGGGGGAACT  648

seq1  GTTTGCTGTACAAATGTCCATAGAAGTAAGAAATGCTGCTAACACACCCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGTACAAATGTCCATAGAAGTAAGAAATGCTGCTAACACACCCT  698

seq1  TGAGCAATACATCAATAGAAACACAAAATGGGAAAGCACCCAAGCACACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAATACATCAATAGAAACACAAAATGGGAAAGCACCCAAGCACACT  748

seq1  GCCATGTAGGACACAGTCTTTCAGTAACAATGTATCTCAGTGTGGCAGGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTAGGACACAGTCTTTCAGTAACAATGTATCTCAGTGTGGCAGGA  798

seq1  GCTCTCTCATGTCTACCACGCTCCTGAATGAATGTCAAGTCTTCTTTTCA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCATGTCTACCACGCTCCTGAATGAATGTCAAGTCTTCTTTTCA  848

seq1  ATCTATAACCTGAATGTAAACCAGCAAATAAGATAAAACTGGGAGGTTAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAACCTGAATGTAAACCAGCAAATAAGATAAAACTGGGAGGTTAA  898

seq1  TTATAAAGAAACAGAATAAAGATCCTAGCAATGTATTATGGGGCCAATGG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGAAACAGAATAAAGATCCTAGCAATGTATTATGGGGCCAATGG  948

seq1  GACAGAAGGCACACTATTTAAAATTAAATCATTACTGGGCTTTAATTTTA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAGGCACACTATTTAAAATTAAATCATTACTGGGCTTTAATTTTA  998

seq1  ATGGTTGTGGAAAAGCTGGACCAAATACATCAAACAACTCTCTAAATAAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTGGAAAAGCTGGACCAAATACATCAAACAACTCTCTAAATAAT  1048

seq1  AGTTGCAAATTGAATAGAGTTAGGAGAGCAATACATTCAGCAGCTATGGA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAATTGAATAGAGTTAGGAGAGCAATACATTCAGCAGCTATGGA  1098

seq1  GGGAATTC  1099
      ||||||||
seq2  GGGAATTC  1106

seq1: chr7_136834404_136834974
seq2: B6Ng01-248K04.g_66_637

seq1  GAATTCAGAGGGCACCTTCTTATCTGAAGAAGGTCAGCAGTGAAGCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGGGCACCTTCTTATCTGAAGAAGGTCAGCAGTGAAGCTGGC  50

seq1  CCAGGGATCACTTCAGAATGACTTCCCAGAGCCAGCTGTCTACTGGGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATCACTTCAGAATGACTTCCCAGAGCCAGCTGTCTACTGGGTTA  100

seq1  GTGTCCATTCATATCTAGCTTTTAAGTACTAACCATGCCCTCGCCTGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCATTCATATCTAGCTTTTAAGTACTAACCATGCCCTCGCCTGAGG  150

seq1  CTCAGCCCAGGGTCTGGGAGACGAAGGACAGTAGTTCCTGTTTTTTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCCAGGGTCTGGGAGACGAAGGACAGTAGTTCCTGTTTTTTCATG  200

seq1  TGGTCTGGTGACAAAGGCACATGCACTTTATTTTAGGACAAGACAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTGGTGACAAAGGCACATGCACTTTATTTTAGGACAAGACAAACAC  250

seq1  CAAAGGGCAGTGTTGGACTGCAGGGGGGACCAGGAGACCTTACTGACTCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGCAGTGTTGGACTGCAGGGGGGACCAGGAGACCTTACTGACTCG  300

seq1  TCGGCAATAAAGTTTGTGTGGTAGGCTTTGATGACTACTATGGGCATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCAATAAAGTTTGTGTGGTAGGCTTTGATGACTACTATGGGCATCCT  350

seq1  CTGTATGTGTGTGTGGGGGGCGGGGGGATGTTACTCTGCTTTCAGGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGTGTGTGGGGGGCGGGGGGATGTTACTCTGCTTTCAGGGGAG  400

seq1  TCTCTGACTTCTTTTTTATAACTTGTGGTGAATGGAGCCAGGTCTTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACTTCTTTTTTATAACTTGTGGTGAATGGAGCCAGGTCTTCTTG  450

seq1  ACCCGATACTGAGGGATAAAGAGGGACAAAGGAGCTCCAGGAGATGGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGATACTGAGGGATAAAGAGGGACAAAGGAGCTCCAGGAGATGGCAG  500

seq1  AGCGAAGCCAGGGTTCTTGGGAGTCAAGAGAGATCTTGGGGTATTGTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAAGCCAGGGTTCTTGGGAGTCAAGAGAGATCTTGGGGTATTGTTCT  550

seq1  GGTTGTGGGGAGGAG-AGGATG  571
      ||||||||||||||| ||||||
seq2  GGTTGTGGGGAGGAGAAGGATG  572