BAC Information

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BAC

Clone NameB6Ng01-248K11
Chromosome7 (Build37)
Map Location 136,738,614 - 136,739,694
singlet/doubletsinglet
Overlap geneBrwd2
Upstream geneEG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714, LOC100043144, Ppapdc1a
Downstream geneLOC100043150, Fgfr2, LOC546005, Ate1, LOC100043163, Nsmce4a, Tacc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248K11.bB6Ng01-248K11.g
ACCGA056674GA056675
length1,1751,094
definitionB6Ng01-248K11.b B6Ng01-248K11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttggtt
ttctggagtccacctttttgagttctttatatatattggatattagtccc
ctatccgatttaggataggtaaagatcctttcccagtctgttggtggcct
ttttgtcttgttgacggtgtcttttgctttgcagaagctttgcaacttta
tgaggtcccatttatcgattcttgatcttactgcacaagccattgctatt
ctattcaggaacttttcccctgtgcccatatcttcgaggcttttccctac
tttctcctctataagtttcagtgtctctagttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagataggaatggatcaatgtgc
attcttctacatgataaccgccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggttttagctcccttgtcaaagatcaaat
gaccataggtgtgtgggttcatctctgggtcttcaattctgttccattgg
tctacttgtctgtcgctataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctattctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctttaattttccttcttcagagacttgaagttcttatcataca
gatctttcacttccttagttagagtcacgccaaggtattttatattattt
gtgactattgaagaagggtgttgtttcctaattttcttttctcagcctgt
ttatcctttgtgtacagaaagggcatttgacttgttggagtttaatttat
atcagcctacttcactgaagcttgttttatcaaggcttagagttcctctg
tagatttttagggttcagtataaatactattcatcatctgcaagtgtact
ttgaactctccttcaatggattccc
gaattcattaccaacagctgcatctctgaacagagctacttcacactttt
tttctggttaggcacattgtaacctcttgcatgcagccacagtaaggagc
agtatgctagggaccattttaaataagatagcaaagaaaaagcccaaata
tagaaaacagtggtaaagctctgagatggacatttatttgcaccgttagg
agtgaagtaaggattccttattgtcccacagctggttgcatgcatgtgtt
ggtcaactctggttagtcaccagtctgtccttgtctgcaaatgccctgta
catattggctttgaggttataaacacatgatatcaggtagctgagttcat
atttgcaaactccatacaatataagttattagatttacctgtatgtagtc
agtatacataatacacgtggtattcaaatgtaaatatatacatatgtata
cacacacacacacatgtacacatttattaaaaagagttttacctgagaag
tttaaagatcagtaaaattagtattcagaaaactttattttcatcttctc
cataaattctgttgtagtttgtggcatttcttttctactttggtattctc
tatatatggttgtttctaggtgcacacacctatgtatgatgacctatgtt
tctgtatatttgaagattctataatgtttatctattaaactgaacagcag
atttggaatctactctttggttatggaatagaagtgcaaggcctctgtgg
tctgctctgtggagctatccatgggctggtcatagtgaaataagttgggt
atttacacgttatacaatggcagggtgctgagagagacagaaggtagtcc
cgggcttcaggggtcgccagggaaagccacagctgatggtgatgaccatg
agatagatgtgtctcttcctctgattattaatggttcagggtgttcatca
gatttaccataacagtctggtaggttttattttttaatttgtgtttgtga
tgctgggtaaggccctggtaccagcctcactatggtaaccactaaccact
gaaccgcaataacctcagcttcttattcttattggctaaaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136738614_136739694
seq2: B6Ng01-248K11.g_66_1159

seq1  GAATTCATTACCAACAGCTGCATCTCTGAACAGAGCTACTTCACACTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACCAACAGCTGCATCTCTGAACAGAGCTACTTCACACTTTT  50

seq1  TTTCTGGTTAGGCACATTGTAACCTCTTGCATGCAGCCACAGTAAGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTAGGCACATTGTAACCTCTTGCATGCAGCCACAGTAAGGAGC  100

seq1  AGTATGCTAGGGACCATTTTAAATAAGATAGCAAAGAAAAAGCCCAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTAGGGACCATTTTAAATAAGATAGCAAAGAAAAAGCCCAAATA  150

seq1  TAGAAAACAGTGGTAAAGCTCTGAGATGGACATTTATTTGCACCGTTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACAGTGGTAAAGCTCTGAGATGGACATTTATTTGCACCGTTAGG  200

seq1  AGTGAAGTAAGGATTCCTTATTGTCCCACAGCTGGTTGCATGCATGTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGTAAGGATTCCTTATTGTCCCACAGCTGGTTGCATGCATGTGTT  250

seq1  GGTCAACTCTGGTTAGTCACCAGTCTGTCCTTGTCTGCAAATGCCCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAACTCTGGTTAGTCACCAGTCTGTCCTTGTCTGCAAATGCCCTGTA  300

seq1  CATATTGGCTTTGAGGTTATAAACACATGATATCAGGTAGCTGAGTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGGCTTTGAGGTTATAAACACATGATATCAGGTAGCTGAGTTCAT  350

seq1  ATTTGCAAACTCCATACAATATAAGTTATTAGATTTACCTGTATGTAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCAAACTCCATACAATATAAGTTATTAGATTTACCTGTATGTAGTC  400

seq1  AGTATACATAATACACGTGGTATTCAAATGTAAATATATACATATGTATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATACATAATACACGTGGTATTCAAATGTAAATATATACATATGTATA  450

seq1  CACACACACACACATGTACACATTTATTAAAAAGAGTTTTACCTGAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACATGTACACATTTATTAAAAAGAGTTTTACCTGAGAAG  500

seq1  TTTAAAGATCAGTAAAATTAGTATTCAGAAAACTTTATTTTCATCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGATCAGTAAAATTAGTATTCAGAAAACTTTATTTTCATCTTCTC  550

seq1  CATAAATTCTGTTGTAGTTTGTGGCATTTCTTTTCTACTTTGGTATTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTCTGTTGTAGTTTGTGGCATTTCTTTTCTACTTTGGTATTCTC  600

seq1  TATATATGGTTGTTTCTAGGTGCACACACCTATGTATGATGACCTATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGTTGTTTCTAGGTGCACACACCTATGTATGATGACCTATGTT  650

seq1  TCTGTATATTTGAAGATTCTATAATGTTTATCTATTAAACTGAACAGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATATTTGAAGATTCTATAATGTTTATCTATTAAACTGAACAGCAG  700

seq1  ATTTGGAATCTACTCTTTGGTTATGGAATAGAAGTGCAAGGCCTCTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAATCTACTCTTTGGTTATGGAATAGAAGTGCAAGGCCTCTGTGG  750

seq1  TCTGCTCTGTGGAGCTATCCATGGGCTGGTCATAGTGAAATAAGTTGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCTGTGGAGCTATCCATGGGCTGGTCATAGTGAAATAAGTTGGGT  800

seq1  ATTTACACGTTATACAATGGCAGGGTGCTGAGAGAGACAGAAGGTAGTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACACGTTATACAATGGCAGGGTGCTGAGAGAGACAGAAGGTAGTCC  850

seq1  CGGGCTTCAGGGGTCGCCAGGGAAAGCCACAGCTGATGGTGATGACCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTTCAGGGGTCGCCAGGGAAAGCCACAGCTGATGGTGATGACCATG  900

seq1  AGATAGATGTGTCTCTTCCTCTGATTATTAAT-GTTCAGGGTG-TCATCA  948
      |||||||||||||||||||||||||||||||| |||||||||| ||||||
seq2  AGATAGATGTGTCTCTTCCTCTGATTATTAATGGTTCAGGGTGTTCATCA  950

seq1  GATTTACCAT-ACAGTTCTGGTAGGGTTTTATTTTTAATTTGTGTTTGTG  997
      |||||||||| |||| ||||||||| |||  |||||||||||||||||||
seq2  GATTTACCATAACAG-TCTGGTAGGTTTTATTTTTTAATTTGTGTTTGTG  999

seq1  ATGCTGGGT-AGGGCCTTGTACAAG-CTCACTAT-GTA--CACT-ACCAC  1041
      ||||||||| ||| ||| |||| || |||||||| |||  |||| |||||
seq2  ATGCTGGGTAAGGCCCTGGTACCAGCCTCACTATGGTAACCACTAACCAC  1049

seq1  TGAACCGC-ATA--CTCAGC-TCTTA-TCTTATTGGTTAAAATTT  1081
      |||||||| |||  |||||| ||||| ||||||||| ||||||||
seq2  TGAACCGCAATAACCTCAGCTTCTTATTCTTATTGGCTAAAATTT  1094