BAC Information

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BAC

Clone NameB6Ng01-248N07
Chromosome7 (Build37)
Map Location 107,498,221 - 107,499,294
singlet/doubletsinglet
Overlap genePpme1
Upstream geneSerpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3
Downstream geneAU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248N07.bB6Ng01-248N07.g
ACCGA056807GA056808
length1,0861,159
definitionB6Ng01-248N07.b B6Ng01-248N07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgacctttggagtcaaggcaattgctagagtactggctttcaca
tggccatttttatttagatgctgagagtcaatagctttttctcaagttag
attctgtaaatgtacaatttccttgttgaatggtagtatagaaatgaatc
acagtgactactaatgaaagtatttctccacgggtttgctctccatcata
gccttttatctgttcatgcctcctagtgtttgggagcagtgagccccagg
gatcaacttcaacaggaaaataagcagctgcatctccctagacatttgcc
ttgtgtaggataccctgctcagtgtctagctacatagtcccatttaattt
ttctgtgattctttcagattagacagggaaagatatcaaaatttagagca
ataacgtagctgtaacagcaacaaaatacaaacagaacacttagtctaga
caaaaacttactacgttagagggtagtacatgtttgtaaggagaattgtt
tctctgagtcttaaatacttgtcaggtcagataatgtgccatattttttc
agcctttttctcaaggctgaaattatctgagataatttataggctatcaa
agtgatcctgattcccacacacacgtaccttaggtcttgctttgtagctc
aggctgggcttgaactcttaagtcttcctgcttcaaccttcccactggta
taattgcaggcatgtactaccatgcctggctctgcctagctttcttccaa
tcttgtctctaattctctttaccatagactacctacagagttccaaaact
taatagagataagcttggcctctcctccagtcacttaaatcagaatttct
ggtgggcttataccgcactcctcaaagctccttaggtacttgtgttaggc
aggcaaggttgaggactgccctgtttctattgttattggcttctttggtc
ctggtgaagacaacttgactccttgtaaattcacctcttcctgaaaatga
atgaggaattgtttctgagagttctgaggagtaaatttagaataatgcat
ttggggagtaccttagaggtgggtgaatgggtacac
gaattccaagcataagctatctttagttggcaaaaccacatccctgtcag
agcatgagacaaatcatggctgctatgaacaatctgaagcatcctcatat
cccacatcttggattaaaacaaaaatgtaatcacataacatttttgtgtt
tttaaagaaaccaaaattctcactacaggtaataactccagcagttcttt
tagtcttcaggtttgctttagctatgctgggtttttgtttttccacgtga
agctgaaaattgtccttttaagatctctgaagaattgtattgaaattttg
atggggattgcgttgactttgaagattcttttttggtaggatggctattt
tactatattaatcctactgatccatgagcatgggagatctttccaccttc
tgatatatttttcaatgttttagaaagtttttatcctacaaatattttgc
ttatttggttggagttgccacaagatatatatataaacaagcctcaaata
atatatatatatatactatttgaggcttgtttccctgatttctttctcag
tccatttgtcatttgtacataggagggctactgatttttgtgagttaatt
atctatccagctacttttctgaaaagtgtttatcagttgtaaaagtttcc
cagtggaatttttagagtcctgtatatatatatactaccacatcacctgc
aaataaagatgcattgccttctttccaatttgcatcccctggattccctt
cagttgtcttatagctctagttaagacttaaagtactatattaagtaaat
aaagaattgattaatgttccttctgtttctattttgtgggataatttgag
gaatattagtattaactcttctctgaaagtctggtagaattctgtgctaa
aaccatctaaccttggcttttgatgttgttattgtgagacttttaatgac
ttatttctatttcataggagttataggtcctgtttaagtttcttatctga
tctgatttactttggataagggattgtatattgagaaattattcatttct
ttaattctcagttgctggaatacagaatttttttttacaagacttcagat
tctctggattctcagtctgtactatgtcattttcactcctgatataggtt
aactagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107498221_107499294
seq2: B6Ng01-248N07.b_47_1132 (reverse)

seq1  GTGTA-CCATTCACC--ACTCTAA-GTACTCCC--AATGCATTA-TCT-A  42
      ||||| |||||||||   |||||| ||||||||  ||||||||| ||| |
seq2  GTGTACCCATTCACCCACCTCTAAGGTACTCCCCAAATGCATTATTCTAA  50

seq1  ATTTACTCCTCAGAACTCTTCAGAAACAATT-CTCA-TCATTTTCAGG-A  89
      |||||||||||||||||| |||||||||||| |||| ||||||||||| |
seq2  ATTTACTCCTCAGAACTC-TCAGAAACAATTCCTCATTCATTTTCAGGAA  99

seq1  GAGGTGAATTTACAAGGAGTCAAG-TGTC-TCACCAGGACCAAAG-AGCC  136
      |||||||||||||||||||||||| |||| ||||||||||||||| ||||
seq2  GAGGTGAATTTACAAGGAGTCAAGTTGTCTTCACCAGGACCAAAGAAGCC  149

seq1  AATAAACAATAGAAACAGGGCAGTCCTCAACCTTGCCTGCCTAACACAAG  186
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAT-AACAATAGAAACAGGGCAGTCCTCAACCTTGCCTGCCTAACACAAG  198

seq1  TACCTAAGGAGCTTTGAGGAGTGCGGTATAAGCCCACCAGAAATTCTGAT  236
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAGGAGCTTTGAGGAGTGCGGTATAAGCCCACCAGAAATTCTGAT  248

seq1  TTAAGTGACTGGAGGAGAGGCCAAGCTTATCTCTATTAAGTTTTGGAACT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGACTGGAGGAGAGGCCAAGCTTATCTCTATTAAGTTTTGGAACT  298

seq1  CTGTAGGTAGTCTATGGTAAAGAGAATTAGAGACAAGATTGGAAGAAAGC  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGTAGTCTATGGTAAAGAGAATTAGAGACAAGATTGGAAGAAAGC  348

seq1  TAGGCAGAGCCAGGCATGGTAGTACATGCCTGCAATTATACCAGTGGGAA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAGAGCCAGGCATGGTAGTACATGCCTGCAATTATACCAGTGGGAA  398

seq1  GGTTGAAGCAGGAAGACTTAAGAGTTCAAGCCCAGCCTGAGCTACAAAGC  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGCAGGAAGACTTAAGAGTTCAAGCCCAGCCTGAGCTACAAAGC  448

seq1  AAGACCTAAGGTACGTGTGTGTGGGAATCAGGATCACTTTGATAGCCTAT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTAAGGTACGTGTGTGTGGGAATCAGGATCACTTTGATAGCCTAT  498

seq1  AAATTATCTCAGATAATTTCAGCCTTGAGAAAAAGGCTGAAAAAATATGG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTCAGATAATTTCAGCCTTGAGAAAAAGGCTGAAAAAATATGG  548

seq1  CACATTATCTGACCTGACAAGTATTTAAGACTCAGAGAAACAATTCTCCT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTATCTGACCTGACAAGTATTTAAGACTCAGAGAAACAATTCTCCT  598

seq1  TACAAACATGTACTACCCTCTAACGTAGTAAGTTTTTGTCTAGACTAAGT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACATGTACTACCCTCTAACGTAGTAAGTTTTTGTCTAGACTAAGT  648

seq1  GTTCTGTTTGTATTTTGTTGCTGTTACAGCTACGTTATTGCTCTAAATTT  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTGTATTTTGTTGCTGTTACAGCTACGTTATTGCTCTAAATTT  698

seq1  TGATATCTTTCCCTGTCTAATCTGAAAGAATCACAGAAAAATTAAATGGG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTTTCCCTGTCTAATCTGAAAGAATCACAGAAAAATTAAATGGG  748

seq1  ACTATGTAGCTAGACACTGAGCAGGGTATCCTACACAAGGCAAATGTCTA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTAGCTAGACACTGAGCAGGGTATCCTACACAAGGCAAATGTCTA  798

seq1  GGGAGATGCAGCTGCTTATTTTCCTGTTGAAGTTGATCCCTGGGGCTCAC  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGCAGCTGCTTATTTTCCTGTTGAAGTTGATCCCTGGGGCTCAC  848

seq1  TGCTCCCAAACACTAGGAGGCATGAACAGATAAAAGGCTATGATGGAGAG  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCAAACACTAGGAGGCATGAACAGATAAAAGGCTATGATGGAGAG  898

seq1  CAAACCCGTGGAGAAATACTTTCATTAGTAGTCACTGTGATTCATTTCTA  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCGTGGAGAAATACTTTCATTAGTAGTCACTGTGATTCATTTCTA  948

seq1  TACTACCATTCAACAAGGAAATTGTACATTTACAGAATCTAACTTGAGAA  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCATTCAACAAGGAAATTGTACATTTACAGAATCTAACTTGAGAA  998

seq1  AAAGCTATTGACTCTCAGCATCTAAATAAAAATGGCCATGTGAAAGCCAG  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATTGACTCTCAGCATCTAAATAAAAATGGCCATGTGAAAGCCAG  1048

seq1  TACTCTAGCAATTGCCTTGACTCCAAAGGTCAGAATTC  1074
      ||||||||||||||||||||||||||||||||||||||
seq2  TACTCTAGCAATTGCCTTGACTCCAAAGGTCAGAATTC  1086