BAC Information

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BAC

Clone NameB6Ng01-248O10
Chromosome7 (Build37)
Map Location 33,221,301 - 33,221,827
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
Downstream geneEG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248O10.bB6Ng01-248O10.g
ACCGA056859GA056860
length1,1681,149
definitionB6Ng01-248O10.b B6Ng01-248O10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagttttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctctataccagtaccatggagtttttatcacaattgctctg
tagtaaagctttaggtctggcatggtgattccgccagaagttcttttatc
cttgagaagactttttgctttcctaggttttttgttattccagacaaatt
tgcaaattgctccttccaattcgttgaagaattgagttggaattttgatg
gggattgcattgaatctgtagattgcttttggcaagatagccatttttac
aatgttgatcctgccaatccatgagcatgggagatctttccatcttctga
gatcttctttaatttctttcttcagagatttgaaggttttatcatacaga
tctttcacctccttagttaggagtcacgccagataattttatatattgtg
actattgagaagggtgttgttttcctaattctttcttcagcctgtttatt
ctttggtatagagaaagtccatggacttgttggagttttatttatatcag
ctactttcacggaagcctggttatcaggttaaggagttctctggatagga
ttttaagttactttaatattactatcaatgcatctgcaaaagggatattt
gaactccctcttttccaa
gaattcagttaaagatggaaggaaaatgaaacggaagttacttgacttta
gagaaaaactgtagcaatagtgcatagttaccatcttgtgctcatccagt
ttctcttcatgtcaactgtttataaaattcccaggtgtggtgcctgccac
atacctataaccacagcactaggagggagacataggaggatcagaaattc
aaggctccttagacacttcagggccagactgggatacaaaagatccatct
taaaggagggaaaaaaatctatttaactcttgtcaaaactaaaataatgg
tacaaaaatattaaccaagccaagaaacttatttgaattctactggtttg
tctactaatatattttgtgtctggggacctttcagcagctcacattatat
ttaatttagtccccacttttgttctctttggacttctggagtcgacaaca
tttcaggagcatccttgcttctcaggatatgccattttccaagacaattg
gtcagtcactggtttttgtttggttgttggttgtttgttttttctgcatg
tccttccattcaagtttacctaccattgtttcaggactagacttaattta
taaaaaccagataaaatattgtaagtgtttctcagtgagacattttagaa
agacataaggtgttgtcttgtgcttatcttactttctaggtaaattggtc
tgttttttatctatggtaaagtattaatacttctctttatagttattaaa
taccttaaatagttattttgaaattataaaagccctctgattctaacttt
cattactaattttagtgtgcactggtggatagtgtctgcagtgcttattt
ggggatgagtatatagtgactattttcctttctgccttccacataactgt
aactctgctgcataggaaagccattctttttcttttttattagatatttt
tcttcatttacatttcaaatgctatcccaaaagtttcccataccctctca
ctgccctgctccccaaccccttccacgctgctcttgccttgcattccctg
tactggcatagacttgaagaccagggtctcttcctgatcatatgtcgata
ggtcatcatcgctacatcgtcactgagagtacacatgattcttgctaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33221301_33221827
seq2: B6Ng01-248O10.b_687_1217 (reverse)

seq1  TTGGAAAAGAGGAAGTCAAAATATCCCTTTTTGCAGATGATATGATAGTA  50
      |||||||||||| |||  ||||||||| |||||||||||   ||||||||
seq2  TTGGAAAAGAGGGAGTTCAAATATCCC-TTTTGCAGATGCATTGATAGTA  49

seq1  TATATCAGTGACCCTAAAAATTCCA-CCAGAGAACTCCTAAACCTGATAA  99
       |||| |  |   || ||||| | | ||||||||||||| ||||||||||
seq2  -ATATTAAAGTAACTTAAAATCCTATCCAGAGAACTCCTTAACCTGATAA  98

seq1  ACA-GCTTCGGTG-AAGTAGCTGGATATAAAATTAACT----CAAGTCAA  143
       || ||||| ||| |||||||| ||||||||   ||||    |||||| |
seq2  CCAGGCTTCCGTGAAAGTAGCT-GATATAAATAAAACTCCAACAAGTCCA  147

seq1  TGGTCTTTCTCTACA-CAAAGAATAAACAGGCTG-AGAAAGAAATTAGGG  191
      ||| ||||||||| | |||||||||||||||||| |||||| ||||||| 
seq2  TGGACTTTCTCTATACCAAAGAATAAACAGGCTGAAGAAAG-AATTAGGA  196

seq1  AAACAACACCCTTCTCAATAGTCACAAATAATATAAAA-TATCTTTGTGT  240
      |||||||||||||||||||||||||||   |||||||| |||| | | ||
seq2  AAACAACACCCTTCTCAATAGTCACAA--TATATAAAATTATC-TGGCGT  243

seq1  GACT-CTAACTAAGGAAGTGAAAGATCTGAATCATAAAAACTTCAAGTCT  289
      |||| ||||||||||| |||||||||||| || |||||| |||||| |||
seq2  GACTCCTAACTAAGGAGGTGAAAGATCTGTATGATAAAACCTTCAAATCT  293

seq1  CTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATATCCCATG  339
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATG  343

seq1  CTCATGGATTGGCAGTATCAACATTGTAAAAATGGCTATCTTGCCAAAAG  389
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAG  393

seq1  CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTC  443

seq1  AACGAATTAGAAAGAGCAATCTGCAAATTCATCTGGAACAACAAAAAACC  489
      |||||||| ||| ||||||| ||||||||  ||||||| |||||||||||
seq2  AACGAATTGGAAGGAGCAATTTGCAAATTTGTCTGGAATAACAAAAAACC  493

seq1  TAGGATAGCAAAAACTCTTCTCAAGGATAAAAGAACCT  527
      ||||| |||||||| ||||||||||||||||||||| |
seq2  TAGGAAAGCAAAAAGTCTTCTCAAGGATAAAAGAACTT  531