BAC Information

Click to search

BAC

Clone NameB6Ng01-249D22
Chromosome7 (Build37)
Map Location 9,766,838 - 9,875,498
singlet/doubletdoublet
Overlap geneEG665577, LOC665571, LOC100042083, Gm1961
Upstream geneLOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113
Downstream geneV2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921, Vmn2r52, LOC665663, V1re11, LOC628521
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249D22.bB6Ng01-249D22.g
ACCGA057116GA057117
length1,1321,098
definitionB6Ng01-249D22.b B6Ng01-249D22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,766,838 - 9,767,986)(9,874,383 - 9,875,498)
sequence
gaattcaatgctaacctggtctacagacagagttccatggacagccaggg
agggctacatggagagatcctgcctcaaacaacaacaaaaacaacacaac
ttcaaacaaaaatacaatgacagtaagaagacataacactctagcacgtt
ggttctcaacatgtggatcatgatcttttaggggatatgtaagaccatca
ggaaacacagatatttaaaggaagattcatgacagtagtgaaactacagt
tatgaggtagaaatgataatttatggctgggggtcaccataacaagagga
actgtgataaagggtcttaggattagaaagagtgagcaccactgctcttg
cacatggttgcctaaagtggaaatacagcatgactgatatgataagtggg
aaagcagctacataaatttaatcatctgaatcgacatggtaggtgaaaaa
aagtgacttttccaaattgtactctgacttgcataagtgtagggacatac
acacacacaccccttttttaggtgagtaagaactcatgaatttattgtct
tcattacaaaatcagcatagaactagatcactgtgcattggtgtttgcta
catctctgtctgcatctgtctctttgtctctctctgtctctcagtcactc
tggttggtttgttttttgtttgctttttgagacagggtttctctgtgtag
ctctggctgtcctgaaactcactctgtagtccaggctgaccttgaactcc
atcatctgcctgacatgtgtgccactgccacatggctgcaaacaccatct
ttataagagtaaaattaataaataaaatgggactgtaagactggatcact
atcagggacatcagccctctgcctgggcttaggacccacacaccagggtg
ctgcaacaaccaggtaagctaaagattctctgccaccccatccagcatca
acaggccagcagacagggatgtccagaggggcacatgaataggggcgttt
gtacccaagcttagaccagttatactgtgtggtgcagacttcaaacctgt
ctcagctcaagtaaaactttctctctcctctcctccccccccatccattc
cgtttcttcctacttcatgagtcagagtttct
gaattctcattgacatataacttgattttgtccaaggaattccgtttgga
gtttgacattaatagtttataggatcatcttattatgtttatcacatgta
aatatggaataaataactggcattaataattccatatgttctgattatag
aatttacaatttaaagtatagtgttcttagtactaaacctggaataaata
tcactgaattgtctatcactaactcatgctttactcactactattcatat
gaggtatgaggtcggatttcctggtcttttcacctagcatcgtttcaaac
aactacttaccataatgtatatgcaaattttgtcctattatgatggctta
gattttgtttaatcttgttttattttagtattctcctatagaatcctgtt
attttctaatgagtgacagaaagtggatctgatggaaaaggcagttggga
agtaaataggaatattaactaagatatatttgccagcaaagctgacagtt
ggtcacattccaatagaagggagtgaaactgtaattaggatatattatgt
gaggataacaattttttttcaaaaaataaaacaatcacaatttcaaaaaa
attctctctgttctcagagaatgatctttctgttgtgtgttgtgttcttt
tgttacgtgtttttgtcaagtattattccatacatatgtatcaaattctt
gaattacctttttcccccttattaaacattataatgtttttctccagttt
tttaagaaagaaaagttcttctcttgtatatgaatgtgccttcctaccct
ctgcaggcaacttaggaatgccttaaaaaataaatcagcctcgttgacct
tgatttcatttagagaacattaacaaaattgttcagttataacagaaaat
tatttgttgcttttgcttagttgctgtttttctgtattgaggtgtgtaat
agtcattgttgttgtgctctagtgctgtctataggctcctttgaccttct
gtcatcttactaaagtgtgaagggatctcatatattaaaagtgctgtctg
aagaaatgaattccatagttgtgtcattagtgatgtgggggtagtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9766838_9767986
seq2: B6Ng01-249D22.b_49_1180

seq1  GAATTCAATGCTAACCTGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGCTAACCTGGTCTACAGACAGAGTTCCATGGACAGCCAGGG  50

seq1  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTACATGGAGAGATCCTGCCTCAAACAACAACAAAAACAACACAAC  100

seq1  TTCAAACAAAAATACAATGACAGTAAGAAGACATAACACTCTAGCACGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACAAAAATACAATGACAGTAAGAAGACATAACACTCTAGCACGTT  150

seq1  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCAACATGTGGATCATGATCTTTTAGGGGATATGTAAGACCATCA  200

seq1  GGAAACACAGATATTTAAAGGAAGATTCATGACAGTAGTGAAACTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACACAGATATTTAAAGGAAGATTCATGACAGTAGTGAAACTACAGT  250

seq1  TATGAGGTAGAAATGATAATTTATGGCTGGGGGTCACCATAACAAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGTAGAAATGATAATTTATGGCTGGGGGTCACCATAACAAGAGGA  300

seq1  ACTGTGATAAAGGGTCTTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGATAAAGGGTCTTAGGATTAGAAAGAGTGAGCACCACTGCTCTTG  350

seq1  CACATGGTTGCCTAAAGTGGAAATACAGCATGACTGATATGATAAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGTTGCCTAAAGTGGAAATACAGCATGACTGATATGATAAGTGGG  400

seq1  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTACATAAATTTAATCATCTGAATCGACATGGTAGGTGAAAAA  450

seq1  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACTTTTCCAAATTGTACTCTGACTTGCATAAGTGTAGGGACATAC  500

seq1  ACACACACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACCCCTTTTTTAGGTGAGTAAGAACTCATGAATTTATTGTCT  550

seq1  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACAAAATCAGCATAGAACTAGATCACTGTGCATTGGTGTTTGCTA  600

seq1  CATCTCTGTCTGCATCTGTCTCTTTGTCTCTCTCTGTCTCTCAGTCACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGTCTGCATCTGTCTCTTTGTCTCTCTCTGTCTCTCAGTCACTC  650

seq1  TGGTTGGTTTGTTTTTTGTTTGCTTTTTGAGACAGGGTTTCTCTGTGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGTTTGTTTTTTGTTTGCTTTTTGAGACAGGGTTTCTCTGTGTAG  700

seq1  CTCTGGCTGTCCTGAAACTCACTCTGTAGTCCAGGCTGACCTTGAACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTGTCCTGAAACTCACTCTGTAGTCCAGGCTGACCTTGAACTCC  750

seq1  ATCATCTGCCTGACATGTGTGCCACTGCCACATGGCTGCAAACACCATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTGCCTGACATGTGTGCCACTGCCACATGGCTGCAAACACCATCT  800

seq1  TTATAAGAGTAAAATTAATAAATAAAATGGGACTGTAAGACTGGATCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGAGTAAAATTAATAAATAAAATGGGACTGTAAGACTGGATCACT  850

seq1  ATCAGGGACATCAGCCCTCTGCCTGGGCTTAGGACCCACACACCAGGGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGACATCAGCCCTCTGCCTGGGCTTAGGACCCACACACCAGGGTG  900

seq1  CTGCAACAACCAGGTAAGCTAAGGATTCTCTGCCACCCCATCCAGCATCA  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTGCAACAACCAGGTAAGCTAAAGATTCTCTGCCACCCCATCCAGCATCA  950

seq1  ACAGGCCAGCAGACAGGGATGTCCAGAGGGGCACATGAATAGGGGCGTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAGCAGACAGGGATGTCCAGAGGGGCACATGAATAGGGGCGTTT  1000

seq1  GTACCCAAGGCTTAGACCAGTTATACTGTGGTGGTGCAGACTTCAAACCT  1050
      |||||||| |||||||||||||||||||| ||||||||||||||||||||
seq2  GTACCCAA-GCTTAGACCAGTTATACTGT-GTGGTGCAGACTTCAAACCT  1048

seq1  GTCTCAGCTCCAGGGGAAAACCTTTTCTCCCTCTCCCTCTCCCTCCCCCC  1100
      |||||||||| |  | |||||  |||||| ||   ||||| |||||||||
seq2  GTCTCAGCTCAA--GTAAAAC--TTTCTCTCT---CCTCT-CCTCCCCCC  1090

seq1  CCCTCCCCCTCTCCCTTTCTTTCTTTCTTTCCTTTGAGTCAGAGTTTCT  1149
      || |   ||  ||| |||| ||| | |||     |||||||||||||||
seq2  CCAT---CCATTCCGTTTC-TTCCTACTT---CATGAGTCAGAGTTTCT  1132

seq1: chr7_9874383_9875498
seq2: B6Ng01-249D22.g_65_1162 (reverse)

seq1  GACACTCACCACA-ATCACTAATGAACACAACTATAGAAATTCATATTCT  49
      ||||||  || || |||||||||| |||||||||| | ||||||| ||||
seq2  GACACTACCCCCACATCACTAATG-ACACAACTAT-GGAATTCAT-TTCT  47

seq1  CAAGAACAGCACTTTTTAATAATATGGAAGAATCCCTTCACACTTTTAAG  99
        || ||||||| ||||||| |||||  || |||||||||||||||  ||
seq2  TCAG-ACAGCAC-TTTTAAT-ATATG--AG-ATCCCTTCACACTTT--AG  89

seq1  TAAGATGAACAGAAGGTCAAAGGAGCCTATAGACAGCACTAGAGCAACAA  149
      ||||||| ||||||||||||||||||||||||||||||||||||||   |
seq2  TAAGATG-ACAGAAGGTCAAAGGAGCCTATAGACAGCACTAGAGCA--CA  136

seq1  ACAAACAAATGACTATTAACACACCTCAAATACAGAAAAAACAGCAACTA  199
      ||||   |||||||||| ||||||||| ||||||| ||||||||||||||
seq2  ACAA--CAATGACTATT-ACACACCTC-AATACAG-AAAAACAGCAACTA  181

seq1  AGCAAAAGCAACAAATAATTTTCTGTTATAACTGAACAATTTTGTTAATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAGCAACAAATAATTTTCTGTTATAACTGAACAATTTTGTTAATG  231

seq1  TTCTCTAAATGAAATCAAGGTCAACGAGGCTGATTTATTTTTTAAGGCAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAAATGAAATCAAGGTCAACGAGGCTGATTTATTTTTTAAGGCAT  281

seq1  TCCTAAGTTGCCTGCAGAGGGTAGGAAGGCACATTCATATACAAGAGAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTTGCCTGCAGAGGGTAGGAAGGCACATTCATATACAAGAGAAG  331

seq1  AACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAATAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAATAAG  381

seq1  GGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATACTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATACTT  431

seq1  GACAAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCATTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCATTCT  481

seq1  CTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTTTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTTTGAA  531

seq1  AAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACTCCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACTCCCT  581

seq1  TCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCTTAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCTTAGT  631

seq1  TAATATTCCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACTTTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACTTTCT  681

seq1  GTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAATAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAATAAAA  731

seq1  CAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCATATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCATATA  781

seq1  CATTATGGTAAGTAGTTGTTTGAAACGATGCTAGGTGAAAAGACCAGGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATGGTAAGTAGTTGTTTGAAACGATGCTAGGTGAAAAGACCAGGAA  831

seq1  ATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGTTAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGTTAGT  881

seq1  GATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACACTAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACACTAT  931

seq1  ACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAATGCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAATGCCA  981

seq1  GTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGATCCTATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGATCCTATA  1031

seq1  AACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAAGTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAAGTTA  1081

seq1  TATGTCAATGAGAATTC  1116
      |||||||||||||||||
seq2  TATGTCAATGAGAATTC  1098