BAC Information

Click to search

BAC

Clone NameB6Ng01-249K09
Chromosome7 (Build37)
Map Location 107,230,890 - 107,231,905
singlet/doubletsinglet
Overlap genePold3
Upstream geneUvrag, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2
Downstream gene2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249K09.bB6Ng01-249K09.g
ACCGA057411GA057412
length1,014916
definitionB6Ng01-249K09.b B6Ng01-249K09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcaagaatgacctgctgggccacacttgccctgcgcatgtgc
ctctcctggtctctgtgttctgtgagcgggaggcagtgtttttatttgat
gagttctactggatgtgttcaccgcgtctccactttcctctccacactac
catacttctgtcccccgaccccacaatctgttttctgtaaatcttttaag
tcttagtcagatgagaagctaaaactaaaatcttctgtaattcccgatct
ccgttgatgtagtgagtgactcagctccaggctaggccagtgtgcatcgt
ccagtcctttcatctcatccgctccctctcacttccctcagactgagatg
tgctgatgaatccagcctcaccagaaatgacttaaagtcacatggtggcc
aatgacagagctggcatgttgctagcacagggtatgcatatactcatgtg
tggtttctttcttccagatttcctatacttattacccagagagtggaacc
tgtacagcgagatgaaagattaaaataagaatgctttctatgcaccagat
aacttacctcaaggaaatacagagtccagaaatgtcagtttcctgtcctg
ggaaggaagggagaacttagcacacatttctacacagatgttgctcctct
gttttgtcaagttcttcatttgtccagcagcacaggctccccaggagggg
acagggggctgacttttataactttcagtcaccttccattctggctgggc
aggaggtgagccctgtccgtgttgtgtggcagtggctttgcacactgagc
tgtagtgagggaacccagactccactgctggtgtgaacccaggggagatg
agggatgtctgctccaaccctccgctgagggctggcttgtgtcatgtaat
cagttgcctactgttgggaggttggggttggggctgactttggattttcc
catctgctttagcaccaagcctggggtacctggtagacagcacttgggaa
atgattctggtctc
gaattctttgtttagctctgtaccccatttcttaatagggttatttggtt
ttcgagtccaacttatttctaatagccagaagctggaaagaacccagatg
tccctcaacagaggaatggatacagaaaatgtggtacatttacacaatgg
agcactatgcacttattaaaaacaatgaatttatgaaattcttagataaa
tggatggatctgaaagatatcatcttgaggtaacccaatcaccaaagaac
tcacatgatatgcactcactgataagtggatattagcccagaagctcaga
atacccatgatacaatttgcaaaacacatgaaactcaagaagaaggaaga
ccaaagtgtggatacttggatccttcttagaagaggggacaaaataccca
tgaaagaagttacagagacaaattgtggagcagagactgaaggaaggacc
atctagagactgccccatctggggatcaatcccataaacaaccaccaaac
ccagacactattatggatgccaacaagagcttgctgacaggagcctgata
tagctgtctcctgtgaggctctgccagtgcctgacaaatacagacgtgga
tgctcacagccatccattggatggagcacagggtccccagtgaaggagct
agagaaagtacccaaggagctgaaggggtgtgcagccccctaggaggaac
aataatatgaactaaccaggacccccagagctccctggaactaaaccacc
aatcaaagaaaacacatggtggggctcatggctctagctgcatatgtagc
tgaggatggcctagtcggacttcaatgggaggagaggcccttggtcttgg
gaaggttctatgccccagtacaggggactgccaaggccaggaagggggag
ttgggtgggtttggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107230890_107231905
seq2: B6Ng01-249K09.b_44_1057 (reverse)

seq1  GAGACCAGGACTCATCTCCCAAGCTGCTGGTCT-CCAGGTAGCCCAGGCT  49
      ||||||| || |||| ||||||| |||| |||| ||||||| ||||||||
seq2  GAGACCA-GAATCATTTCCCAAG-TGCT-GTCTACCAGGTACCCCAGGCT  47

seq1  TGGTTGCTAAAGCAGATGTGTAAATCCCAAGTCAGCCCCAACCCCAACCT  99
      ||| |||||||||||||| | |||||| ||||||||||||||||||||||
seq2  TGG-TGCTAAAGCAGATGGGAAAATCCAAAGTCAGCCCCAACCCCAACCT  96

seq1  -CCAACAGTAGGCAACTGATTACATGACACAAGCCAGCCCTCAGCGGAGG  148
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGTAGGCAACTGATTACATGACACAAGCCAGCCCTCAGCGGAGG  146

seq1  GTTGGAGCAGACATCCCTCATCTCCCCTGGGTTCACACCAGCAGTGGAGT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGCAGACATCCCTCATCTCCCCTGGGTTCACACCAGCAGTGGAGT  196

seq1  CTGGGTTCCCTCACTACAGCTCAGTGTGCAAAGCCACTGCCACACAACAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTCCCTCACTACAGCTCAGTGTGCAAAGCCACTGCCACACAACAC  246

seq1  GGACAGGGCTCACCTCCTGCCCAGCCAGAATGGAAGGTGACTGAAAGTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGGGCTCACCTCCTGCCCAGCCAGAATGGAAGGTGACTGAAAGTTA  296

seq1  TAAAAGTCAGCCCCCTGTCCCCTCCTGGGGAGCCTGTGCTGCTGGACAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCAGCCCCCTGTCCCCTCCTGGGGAGCCTGTGCTGCTGGACAAA  346

seq1  TGAAGAACTTGACAAAACAGAGGAGCAACATCTGTGTAGAAATGTGTGCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACTTGACAAAACAGAGGAGCAACATCTGTGTAGAAATGTGTGCT  396

seq1  AAGTTCTCCCTTCCTTCCCAGGACAGGAAACTGACATTTCTGGACTCTGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCTCCCTTCCTTCCCAGGACAGGAAACTGACATTTCTGGACTCTGT  446

seq1  ATTTCCTTGAGGTAAGTTATCTGGTGCATAGAAAGCATTCTTATTTTAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTGAGGTAAGTTATCTGGTGCATAGAAAGCATTCTTATTTTAAT  496

seq1  CTTTCATCTCGCTGTACAGGTTCCACTCTCTGGGTAATAAGTATAGGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCTCGCTGTACAGGTTCCACTCTCTGGGTAATAAGTATAGGAAA  546

seq1  TCTGGAAGAAAGAAACCACACATGAGTATATGCATACCCTGTGCTAGCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGAAAGAAACCACACATGAGTATATGCATACCCTGTGCTAGCAA  596

seq1  CATGCCAGCTCTGTCATTGGCCACCATGTGACTTTAAGTCATTTCTGGTG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGCTCTGTCATTGGCCACCATGTGACTTTAAGTCATTTCTGGTG  646

seq1  AGGCTGGATTCATCAGCACATCTCAGTCTGAGGGAAGTGAGAGGGAGCGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGATTCATCAGCACATCTCAGTCTGAGGGAAGTGAGAGGGAGCGG  696

seq1  ATGAGATGAAAGGACTGGACGATGCACACTGGCCTAGCCTGGAGCTGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATGAAAGGACTGGACGATGCACACTGGCCTAGCCTGGAGCTGAGT  746

seq1  CACTCACTACATCAACGGAGATCGGGAATTACAGAAGATTTTAGTTTTAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACTACATCAACGGAGATCGGGAATTACAGAAGATTTTAGTTTTAG  796

seq1  CTTCTCATCTGACTAAGACTTAAAAGATTTACAGAAAACAGATTGTGGGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATCTGACTAAGACTTAAAAGATTTACAGAAAACAGATTGTGGGG  846

seq1  TCGGGGGACAGAAGTATGGTAGTGTGGAGAGGAAAGTGGAGACGCGGTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGGGACAGAAGTATGGTAGTGTGGAGAGGAAAGTGGAGACGCGGTGA  896

seq1  ACACATCCAGTAGAACTCATCAAATAAAAACACTGCCTCCCGCTCACAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATCCAGTAGAACTCATCAAATAAAAACACTGCCTCCCGCTCACAGA  946

seq1  ACACAGAGACCAGGAGAGGCACATGCGCAGGGCAAGTGTGGCCCAGCAGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAGACCAGGAGAGGCACATGCGCAGGGCAAGTGTGGCCCAGCAGG  996

seq1  TCATTCTTGAATGAATTC  1016
      ||||||||||||||||||
seq2  TCATTCTTGAATGAATTC  1014