BAC Information

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BAC

Clone NameB6Ng01-250J04
Chromosome7 (Build37)
Map Location 15,248,584 - 15,249,708
singlet/doubletsinglet
Overlap geneEG194588
Upstream geneLOC100042624, LOC100043194, Sult2a1, EG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik
Downstream geneLOC666352, EG666312, LOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250J04.bB6Ng01-250J04.g
ACCGA058080GA058081
length9731,106
definitionB6Ng01-250J04.b B6Ng01-250J04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccttacactgggaaacagagccttcacaagaccaagggcctctc
ccaacattgatgactgacaaggccatcatctgctacatatgcatctggag
ccatgagtcccaccatgtgtactctatggttggtggtttagtccctggga
gctctggggcttactggttagttcatatggttgtcccttctatgggactg
caaatccttctgctccttaggtcctttctctagctccttcattgaggatc
ctgtgctctgtccaatggatggctgtgagcatactatatatttctaatgc
tatcctgaaagctccctataccctccccatgccctgctcccctacctacc
cactcacacttcttggccctggcactccccttactgggacatataaagtt
tgcaagatcaagggtcctctcttcccaacgagtacatacacttctgcatt
tgtcagaaactgaaagagcttctttggagactatataaggctcctgtcag
aaagcacttttgggcatccaaaatagcgtctgggtttggtgattgtatat
gggacagatcctcaggtggatcaatctctgaatggtcattccctcagtct
ctagtccacactttgtcttgtaactccttccatggatattttgttccccc
ttctaagaagtatcaaagtatccagttttgtcttccttcatcttgagttt
catgtggtttgtgaattgtatcttggggtattccaagctactgggctaat
attctattatcagtgagtgcatatcatgtgtgctcttttgtgaatgggtt
acatcactcaggatgttatcatacagatccatcaatttgcctaagaattt
catatagtcattgtttttaataggtgagtagtactccattgtgtaaatgt
accacattttctgtatccagtcctcagttgaggtacatctggggtttttt
tccagcttctggctattataaaa
gaattcactgagggtcttttaggtatctattgacttggatgccctgagag
tcttctcagagttcgtaaacatgggcccattacagcaccttgttgcattt
ggatacctgattgtcttgatggtccttcagactcttgctgaagtaggttc
ctttcagggactgaaagacttgattgcattgtacttcctggggtcactag
gggactctgactcatttgaaaaggtaagttctttgccagttcttgaggta
tttgggaactgatttctatgggtatattcgaagccacttgaagttttgga
tgcaaggagggaccttcagccatatgtgtgttctgaacttattggagtat
gttcctgtactggagaacctgttaaaaggaaaaacaatagaaaagctaca
gagaacccccatttacccatcatgcctacctagcatttgttatggacatt
ttgtagcaggaatcaatcaggaccctcattctttctgaacaacttcctct
gtttcccaatcttaaaagtattttcagtattgccataaacatgcattaaa
cagcagtgttaataagagactgttagtccagatagggggagaacacccaa
ttgccagcccatgtttaaatgtcctagctcctgtccttctagcaggcaaa
ttctgctaaggcagacgaccacctagtctgccccttccatgaaaaaaaaa
aacacagcctaaaagcattctgtgcatgcagggaactcccaccagcttct
ctgctctactgaagacaccatagcctaaagacatctcagaagttcaaatg
caacaaaacatctgataaccagcccatctgcaacccacccctgaaaaaac
acagcctgaagtaatcccaggcattgtgctcaaaacgcagccactgtcac
aatgactaatcacatcccaggatttcttctacaacaatgcaaacagacaa
ctgacaccaaagtctgaagacttcccaggggatctcagtaactgtacaac
agtctgaagactccctaagtctgctgcacacagggaaaagaactcacagt
cttagcccctggacaaagaacagctacagcagcacacctgactaatctct
gagacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15248584_15249708
seq2: B6Ng01-250J04.g_68_1173 (reverse)

seq1  GGTCTTCAGAGGATTAGTCAAGGTGTTGCCCTGCCTGTAGCTGTTCTTTG  50
      |||| ||||| |||||||| ||||||    ||| ||||||||||||||||
seq2  GGTC-TCAGA-GATTAGTC-AGGTGT---GCTG-CTGTAGCTGTTCTTTG  43

seq1  TCCAGGGGGGCCTAAGGACTGTGAGTTCTTTTTCCCTGTGTGCAGCAGAA  100
      ||||||||   |||| |||||||||||| |||||||||||||||||||| 
seq2  TCCAGGGG---CTAA-GACTGTGAGTTC-TTTTCCCTGTGTGCAGCAGA-  87

seq1  CTTTAGGGAGTCTTTCAGACTGTTGGTACAGTTACTGAAGATCCCCTGGG  150
        |||||||||| ||||||||||| |||||||||||| ||||||||||||
seq2  -CTTAGGGAGTC-TTCAGACTGTT-GTACAGTTACTG-AGATCCCCTGGG  133

seq1  AAGTCTTCAGACTTTGGTGTCAGTTGTCTGTTTGCATTGTTTGTAGAAGA  200
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AAGTCTTCAGACTTTGGTGTCAGTTGTCTGTTTGCATTG-TTGTAGAAGA  182

seq1  AATCCTGGGATGTGATTAGTCATTGGTGACAGTGGCTGCGTTTTGAGCAC  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATCCTGGGATGTGATTAGTCATT-GTGACAGTGGCTGCGTTTTGAGCAC  231

seq1  AATGCCTGGGATTACTTCAGGCTGTGTTTTTTCAGGGGTGGGTTGCAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTGGGATTACTTCAGGCTGTGTTTTTTCAGGGGTGGGTTGCAGAT  281

seq1  GGGCTGGTTATCAGATGTTTTGTTGCATTTGAACTTCTGAGATGTCTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGTTATCAGATGTTTTGTTGCATTTGAACTTCTGAGATGTCTTTA  331

seq1  GGCTATGGTGTCTTCAGTAGAGCAGAGAAGCTGGTGGGAGTTCCCTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGTGTCTTCAGTAGAGCAGAGAAGCTGGTGGGAGTTCCCTGCAT  381

seq1  GCACAGAATGCTTTTAGGCTGTGTTTTTTTTTTTCATGGAAGGGGCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAATGCTTTTAGGCTGTGTTTTTTTTTTTCATGGAAGGGGCAGAC  431

seq1  TAGGTGGTCGTCTGCCTTAGCAGAATTTGCCTGCTAGAAGGACAGGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGGTCGTCTGCCTTAGCAGAATTTGCCTGCTAGAAGGACAGGAGCT  481

seq1  AGGACATTTAAACATGGGCTGGCAATTGGGTGTTCTCCCCCTATCTGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTTAAACATGGGCTGGCAATTGGGTGTTCTCCCCCTATCTGGAC  531

seq1  TAACAGTCTCTTATTAACACTGCTGTTTAATGCATGTTTATGGCAATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCTCTTATTAACACTGCTGTTTAATGCATGTTTATGGCAATACT  581

seq1  GAAAATACTTTTAAGATTGGGAAACAGAGGAAGTTGTTCAGAAAGAATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACTTTTAAGATTGGGAAACAGAGGAAGTTGTTCAGAAAGAATGA  631

seq1  GGGTCCTGATTGATTCCTGCTACAAAATGTCCATAACAAATGCTAGGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCTGATTGATTCCTGCTACAAAATGTCCATAACAAATGCTAGGTAG  681

seq1  GCATGATGGGTAAATGGGGGTTCTCTGTAGCTTTTCTATTGTTTTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGATGGGTAAATGGGGGTTCTCTGTAGCTTTTCTATTGTTTTTCCTT  731

seq1  TTAACAGGTTCTCCAGTACAGGAACATACTCCAATAAGTTCAGAACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGGTTCTCCAGTACAGGAACATACTCCAATAAGTTCAGAACACAC  781

seq1  ATATGGCTGAAGGTCCCTCCTTGCATCCAAAACTTCAAGTGGCTTCGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTGAAGGTCCCTCCTTGCATCCAAAACTTCAAGTGGCTTCGAAT  831

seq1  ATACCCATAGAAATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCATAGAAATCAGTTCCCAAATACCTCAAGAACTGGCAAAGAACTT  881

seq1  ACCTTTTCAAATGAGTCAGAGTCCCCTAGTGACCCCAGGAAGTACAATGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCAAATGAGTCAGAGTCCCCTAGTGACCCCAGGAAGTACAATGC  931

seq1  AATCAAGTCTTTCAGTCCCTGAAAGGAACCTACTTCAGCAAGAGTCTGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGTCTTTCAGTCCCTGAAAGGAACCTACTTCAGCAAGAGTCTGAA  981

seq1  GGACCATCAAGACAATCAGGTATCCAAATGCAACAAGGTGCTGTAATGGG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCATCAAGACAATCAGGTATCCAAATGCAACAAGGTGCTGTAATGGG  1031

seq1  CCCATGTTTACGAACTCTGAGAAGACTCTCAGGGCATCCAAGTCAATAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTTTACGAACTCTGAGAAGACTCTCAGGGCATCCAAGTCAATAGA  1081

seq1  TACCTAAAAGACCCTCAGTGAATTC  1125
      |||||||||||||||||||||||||
seq2  TACCTAAAAGACCCTCAGTGAATTC  1106