BAC Information

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BAC

Clone NameB6Ng01-250J22
Chromosome7 (Build37)
Map Location 49,947,878 - 49,948,901
singlet/doubletsinglet
Overlap geneEG434179
Upstream geneEG628403, EG628422, Gprc2a-rs1, EG628444, EG434174, EG637913, EG434175, LOC100039556, EG637898, Gprc2a-rs2, LOC434177, Vmn2r-ps60, 4933421I07Rik, LOC628503, BC063263, LOC100039449, EG637776, C330019L16Rik
Downstream geneEG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250J22.bB6Ng01-250J22.g
ACCGA058116GA058117
length1,023105
definitionB6Ng01-250J22.b B6Ng01-250J22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagtttacagaagcctttcccttccccctgctccttgcccttt
ccctgctaatataaacaagcctttccctgccagtgtaaagaagctcaaga
ctgcctgcctccttccccatctgagaggactgactaatggtcaaaatgac
cacaactgccatagcaagactagctgttctcaaaattagccataacaata
aaaacggtccctgggaccccggcctcagtttgaattctaagataaaccga
ccttgctgacagtttctgacatcgctggctgacaccaaaagtaaaaaaca
taactgttactttgctagccaacaatgataaagttgtgtaaccctccccc
caagccccgcaaatgaagagtagtaaaaaaaaaaaaaaaacctttactgt
aagcaatctgggttgactctccctgcgaggctgagcaaccctgtccgcat
cggaataaaaacctctcgccattgcagcgatctattgtcaagctgtgtct
ctaggggtcgcgttctcaacatttgggcccctggggtcctagcataacca
ctttgccttatcccatcagtgcactctcaccctacttatctggaaaacgg
taggccatggaacagcagcatgggccaggaatcactaaactgcgtccctt
cagcacacactaaccttaagagaggtgcttatgtcactcgagacttgctg
accaatcaaggcctccagtctgacctgccagtcagaagtggaggcgggtg
cttcccggtgctttgctgttggttccgtgctgtatccgaggaggagtgtg
gtgtggtttgtgtgtcctgctctgtgtgctactgctgggtgctgtgaggg
gaattcatgcgagctctgaatccgcgacatggtgagtatatggcagctgc
tttcaatggaggggcaggcgattgaccactggagcgagtatggtgagtcc
tccctggggctgagtaccacatcgcgaacctctgctacacaggaggctac
ctggtggaggttgttttgtggtc
aaaaggctcaacaagctgaaatgctcaagtgaggatgcctcagtcccact
tgggagaaataagaaaggaatcacaaggagggaaggagggagggagggat
ggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_49947878_49948901
seq2: B6Ng01-250J22.b_44_1066 (reverse)

seq1  GACCAC-AAACAACCTC--ACAAGTAGCCCTCCCTGTGTAGCAGAGGTTC  47
      |||||| ||||||||||   || ||||||   ||||||||||||||||||
seq2  GACCACAAAACAACCTCCACCAGGTAGCC--TCCTGTGTAGCAGAGGTTC  48

seq1  GCGATGT-GTACTCAGCCCCAGGGAGGACTCACCATACTCGCTCCAGTTG  96
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  GCGATGTGGTACTCAGCCCCAGGGAGGACTCACCATACTCGCTCCAG-TG  97

seq1  TTCAATCGCCTGCCCCTTCCCATTGGAAGCAGCTGCCATATACTCACCAT  146
       ||||||||||||||||  |||||| ||||||||||||||||||||||||
seq2  GTCAATCGCCTGCCCCT--CCATTGAAAGCAGCTGCCATATACTCACCAT  145

seq1  GTCGCGGATTCAGAGCTCGCATGAATTCCCCTCACAGCACCCAGCAGTAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGCGGATTCAGAGCTCGCATGAATTCCCCTCACAGCACCCAGCAGTAG  195

seq1  CACACAGAGCAGGACACACAAACCACACCACACTCCTCCTCGGATACAGC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGAGCAGGACACACAAACCACACCACACTCCTCCTCGGATACAGC  245

seq1  ACGGAACCAACAGCAAAGCACCGGGAAGCACCCGCCTCCACTTCTGACTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAACCAACAGCAAAGCACCGGGAAGCACCCGCCTCCACTTCTGACTG  295

seq1  GCAGGTCAGACTGGAGGCCTTGATTGGTCAGCAAGTCTCGAGTGACATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTCAGACTGGAGGCCTTGATTGGTCAGCAAGTCTCGAGTGACATAA  345

seq1  GCACCTCTCTTAAGGTTAGTGTGTGCTGAAGGGACGCAGTTTAGTGATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTCTCTTAAGGTTAGTGTGTGCTGAAGGGACGCAGTTTAGTGATTC  395

seq1  CTGGCCCATGCTGCTGTTCCATGGCCTACCGTTTTCCAGATAAGTAGGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCATGCTGCTGTTCCATGGCCTACCGTTTTCCAGATAAGTAGGGT  445

seq1  GAGAGTGCACTGATGGGATAAGGCAAAGTGGTTATGCTAGGACCCCAGGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGTGCACTGATGGGATAAGGCAAAGTGGTTATGCTAGGACCCCAGGG  495

seq1  GCCCAAATGTTGAGAACGCGACCCCTAGAGACACAGCTTGACAATAGATC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATGTTGAGAACGCGACCCCTAGAGACACAGCTTGACAATAGATC  545

seq1  GCTGCAATGGCGAGAGGTTTTTATTCCGATGCGGACAGGGTTGCTCAGCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAATGGCGAGAGGTTTTTATTCCGATGCGGACAGGGTTGCTCAGCC  595

seq1  TCGCAGGGAGAGTCAACCCAGATTGCTTACAGTAAAGGTTTTTTTTTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAGGGAGAGTCAACCCAGATTGCTTACAGTAAAGGTTTTTTTTTTTT  645

seq1  TTTTACTACTCTTCATTTGCGGGGCTTGGGGGGAGGGTTACACAACTTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTACTCTTCATTTGCGGGGCTTGGGGGGAGGGTTACACAACTTTA  695

seq1  TCATTGTTGGCTAGCAAAGTAACAGTTATGTTTTTTACTTTTGGTGTCAG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTGGCTAGCAAAGTAACAGTTATGTTTTTTACTTTTGGTGTCAG  745

seq1  CCAGCGATGTCAGAAACTGTCAGCAAGGTCGGTTTATCTTAGAATTCAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGATGTCAGAAACTGTCAGCAAGGTCGGTTTATCTTAGAATTCAAA  795

seq1  CTGAGGCCGGGGTCCCAGGGACCGTTTTTATTGTTATGGCTAATTTTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGCCGGGGTCCCAGGGACCGTTTTTATTGTTATGGCTAATTTTGAG  845

seq1  AACAGCTAGTCTTGCTATGGCAGTTGTGGTCATTTTGACCATTAGTCAGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCTAGTCTTGCTATGGCAGTTGTGGTCATTTTGACCATTAGTCAGT  895

seq1  CCTCTCAGATGGGGAAGGAGGCAGGCAGTCTTGAGCTTCTTTACACTGGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGATGGGGAAGGAGGCAGGCAGTCTTGAGCTTCTTTACACTGGC  945

seq1  AGGGAAAGGCTTGTTTATATTAGCAGGGAAAGGGCAAGGAGCAGGGGGAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAGGCTTGTTTATATTAGCAGGGAAAGGGCAAGGAGCAGGGGGAA  995

seq1  GGGAAAGGCTTCTGTAAACTGAGAATTC  1024
      ||||||||||||||||||||||||||||
seq2  GGGAAAGGCTTCTGTAAACTGAGAATTC  1023