BAC Information

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BAC

Clone NameB6Ng01-251D14
Chromosome7 (Build37)
Map Location 37,170,983 - 37,335,909
singlet/doubletdoublet
Overlap genenone
Upstream geneRhpn2, C230052I12Rik, Ccdc123, Slc7a9, 2410004F06Rik, Nudt19, Rgs9bp, Ankrd27, Pdcd5, Dpy19l3, zfp507, LOC100043872, EG668988, LOC668507
Downstream geneTshz3, LOC100043874, Zfp536
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251D14.bB6Ng01-251D14.g
ACCGA058549GA058550
length3351,165
definitionB6Ng01-251D14.b B6Ng01-251D14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,170,983 - 37,171,317)(37,334,752 - 37,335,909)
sequence
ttcagagtaaatcagccctgtcagggtgatacagaaccgtcagctctttg
tgacataatataatatgaaatgatattgaacaacatgcgtttggcgctaa
attgttagcgcgttttagctttgacagcacgaagtttattgctttaatcc
caaggtcttttaaacctctttgacataaattgaggttggcttttgtgtgt
aagggggaccctccactttcctttctcttcctctacctaaaactgctttt
tacagtttatgctagtacatcacacttgttctgggtgacaaaaagaaaca
gaaagatgtatttgaatggggtgtgggggttgagg
gaattcattcatgggtgtattcacatcttcattgtgttgtaggaaggtgg
ttgaaatgaggaggtagcggtctccttggaggaattaggtcagcggggaa
gtggcctttgataggtgtcttgcttcagacttctcaacctccttcctttg
ctttgaggctcacagcttccctaccttgttatccttctgccacatttcta
tcttgcaaggaggctgaacacaagagggtcaccctcaaaaaactgaactc
catcaaagcatgagccaaataaactttttatcccaagccccttttcctca
gagatttggtcactgcagtgtaaaactaaccaacacacactgtgaagtcc
cattactggattgcagccctgttcctttggacggctcctgtaaatccttc
tttttctagttcttgcatgtcccgaagccaaagcgtggcagcccagggtc
agggctctgtcatacaagcaagcctgccttccacccacatcaccacagaa
caggcttaacaaatgctactgtgtgttcctcttgggattccccaaccgta
cagcctgccttccctggcacacaggcatacagatatgttccttccaccca
tgacatttccttgttcttcatattttactccaaggggcctgcctgatctt
cggcctcctcagatctgctactgtctgttaacccttgatgtgctgaatgt
cttctgtccagttaccacagcctccattgaaaacaagctccctatggaca
attgtgggtcccatgatgccctgtcttcatcagtgcctggcatggccttt
ggtacccagtagcagcataatgaatgctacagggcgtgaggcagggatac
ttcggtaagaacactaagtaagggccagggagagatggctccgagcttaa
gagcactgggtgctcttcccagacccaggttccattcttcaacccttcat
gtgagtgttgctcacgactgtctgcaactccagttccaggagatgtggcc
acccttataccttattctgatttctgcagaacacaggaacaaaccgttgc
atgcacatagagcatgcaacacacacacacacagactaccgatccacaca
caacgaccaacttgtctaaatattctaagtaagcactactggatggctcc
aacacacatcacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_37170983_37171317
seq2: B6Ng01-251D14.b_52_386

seq1  TTCAGAGTAAATCAGCCCTGTCAGGGTGATACAGAACCGTCAGCTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTAAATCAGCCCTGTCAGGGTGATACAGAACCGTCAGCTCTTTG  50

seq1  TGACATAATATAATATGAAATGATATTGAACAACATGCGTTTGGCGCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAATATAATATGAAATGATATTGAACAACATGCGTTTGGCGCTAA  100

seq1  ATTGTTAGCGCGTTTTAGCTTTGACAGCACGAAGTTTATTGCTTTAATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTAGCGCGTTTTAGCTTTGACAGCACGAAGTTTATTGCTTTAATCC  150

seq1  CAAGGTCTTTTAAACCTCTTTGACATAAATTGAGGTTGGCTTTTGTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTTTTAAACCTCTTTGACATAAATTGAGGTTGGCTTTTGTGTGT  200

seq1  AAGGGGGACCCTCCACTTTCCTTTCTCTTCCTCTACCTAAAACTGCTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGACCCTCCACTTTCCTTTCTCTTCCTCTACCTAAAACTGCTTTT  250

seq1  TACAGTTTATGCTAGTACATCACACTTGTTCTGGGTGACAAAAAGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTATGCTAGTACATCACACTTGTTCTGGGTGACAAAAAGAAACA  300

seq1  GAAAGATGTATTTGAATGGGGTGTGGGGGTTGAGG  335
      |||||||||||||||||||||||||||||||||||
seq2  GAAAGATGTATTTGAATGGGGTGTGGGGGTTGAGG  335

seq1: chr7_37334752_37335909
seq2: B6Ng01-251D14.g_65_1229 (reverse)

seq1  TGTGTG-TGTGTGT--GAGCCATCATTTAAATTCCCTACTTAGGATTATT  47
      |||||| |||||||  ||||||||   |  | | | |||||| || ||||
seq2  TGTGTGATGTGTGTTGGAGCCATCCAGT--AGTGCTTACTTA-GAATATT  47

seq1  TAGACAAGTTGTGTGTGTGTGTGTGTGTGTGT-GTGTGTGTGTGTGTGTG  96
      ||||||||||| ||   ||||||||  |  || || ||||||||||||||
seq2  TAGACAAGTTG-GTCGTTGTGTGTGGATCGGTAGTCTGTGTGTGTGTGTG  96

seq1  TTGCATGCTTCTATGTGCATGC-ACCGTTTGTTCCTGTG-TCTGCAGAAA  144
      |||||||| ||||||||||||| || ||||||||||||| ||||||||||
seq2  TTGCATGC-TCTATGTGCATGCAACGGTTTGTTCCTGTGTTCTGCAGAAA  145

seq1  TCAGAATAGGGTAT-AGGGT-GCCACATCTCCTGGAACTGGAGTTGCAGA  192
      |||||||| ||||| ||||| |||||||||||||||||||||||||||||
seq2  TCAGAATAAGGTATAAGGGTGGCCACATCTCCTGGAACTGGAGTTGCAGA  195

seq1  CAGTCGTGAGCAACACTCACATG-AGGGTTG-AGAATGGAACCTGGGTCT  240
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  CAGTCGTGAGCAACACTCACATGAAGGGTTGAAGAATGGAACCTGGGTCT  245

seq1  GGGAAGAGCACCCAGTGCTCTTAAGCTCGGAGCCATCTCT-CCTGGCCC-  288
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  GGGAAGAGCACCCAGTGCTCTTAAGCTCGGAGCCATCTCTCCCTGGCCCT  295

seq1  TACTTAGTGTTCTTACCGAAGTATCCTTGCCTCACGCCCTGTAGCATTCA  338
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TACTTAGTGTTCTTACCGAAGTATCCCTGCCTCACGCCCTGTAGCATTCA  345

seq1  TTATGCTGCTACTGGGTACCAAAGGCCATGCCAGGCACTGATGAAGACAG  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGCTACTGGGTACCAAAGGCCATGCCAGGCACTGATGAAGACAG  395

seq1  GGCATCATGGGACCCACAATTGTCCATAGGGAGCTTGTTTTCAATGGAGG  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCATGGGACCCACAATTGTCCATAGGGAGCTTGTTTTCAATGGAGG  445

seq1  CTGTGGTAACTGGACAGAAGACATTCAGCACATCAAGGGTTAACAGACAG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGTAACTGGACAGAAGACATTCAGCACATCAAGGGTTAACAGACAG  495

seq1  TAGCAGATCTGAGGAGGCCGAAGATCAGGCAGGCCCCTTGGAGTAAAATA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATCTGAGGAGGCCGAAGATCAGGCAGGCCCCTTGGAGTAAAATA  545

seq1  TGAAGAACAAGGAAATGTCATGGGTGGAAGGAACATATCTGTATGCCTGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAACAAGGAAATGTCATGGGTGGAAGGAACATATCTGTATGCCTGT  595

seq1  GTGCCAGGGAAGGCAGGCTGTACGGTTGGGGAATCCCAAGAGGAACACAC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAGGGAAGGCAGGCTGTACGGTTGGGGAATCCCAAGAGGAACACAC  645

seq1  AGTAGCATTTGTTAAGCCTGTTCTGTGGTGATGTGGGTGGAAGGCAGGCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCATTTGTTAAGCCTGTTCTGTGGTGATGTGGGTGGAAGGCAGGCT  695

seq1  TGCTTGTATGACAGAGCCCTGACCCTGGGCTGCCACGCTTTGGCTTCGGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTATGACAGAGCCCTGACCCTGGGCTGCCACGCTTTGGCTTCGGG  745

seq1  ACATGCAAGAACTAGAAAAAGAAGGATTTACAGGAGCCGTCCAAAGGAAC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCAAGAACTAGAAAAAGAAGGATTTACAGGAGCCGTCCAAAGGAAC  795

seq1  AGGGCTGCAATCCAGTAATGGGACTTCACAGTGTGTGTTGGTTAGTTTTA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGCAATCCAGTAATGGGACTTCACAGTGTGTGTTGGTTAGTTTTA  845

seq1  CACTGCAGTGACCAAATCTCTGAGGAAAAGGGGCTTGGGATAAAAAGTTT  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGTGACCAAATCTCTGAGGAAAAGGGGCTTGGGATAAAAAGTTT  895

seq1  ATTTGGCTCATGCTTTGATGGAGTTCAGTTTTTTGAGGGTGACCCTCTTG  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTCATGCTTTGATGGAGTTCAGTTTTTTGAGGGTGACCCTCTTG  945

seq1  TGTTCAGCCTCCTTGCAAGATAGAAATGTGGCAGAAGGATAACAAGGTAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGCCTCCTTGCAAGATAGAAATGTGGCAGAAGGATAACAAGGTAG  995

seq1  GGAAGCTGTGAGCCTCAAAGCAAAGGAAGGAGGTTGAGAAGTCTGAAGCA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGTGAGCCTCAAAGCAAAGGAAGGAGGTTGAGAAGTCTGAAGCA  1045

seq1  AGACACCTATCAAAGGCCACTTCCCCGCTGACCTAATTCCTCCAAGGAGA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCTATCAAAGGCCACTTCCCCGCTGACCTAATTCCTCCAAGGAGA  1095

seq1  CCGCTACCTCCTCATTTCAACCACCTTCCTACAACACAATGAAGATGTGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTACCTCCTCATTTCAACCACCTTCCTACAACACAATGAAGATGTGA  1145

seq1  ATACACCCATGAATGAATTC  1158
      ||||||||||||||||||||
seq2  ATACACCCATGAATGAATTC  1165