BAC Information

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BAC

Clone NameB6Ng01-251I05
Chromosome7 (Build37)
Map Location 46,977,557 - 47,138,941
singlet/doubletdoublet
Overlap geneLOC100039050, EG668540, 4930558N11Rik
Upstream geneLOC100038955, LOC100038967, LOC620018, LOC100038914, EG668531, EG628058, EG668618, EG330513, EG434168, 9430025M13Rik, LOC100038985, 3000002G13Rik, EG215208, LOC100039133
Downstream geneEG628161
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251I05.bB6Ng01-251I05.g
ACCGA058756GA058757
length1,020473
definitionB6Ng01-251I05.b B6Ng01-251I05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,977,557 - 46,978,563)(47,138,463 - 47,138,941)
sequence
gaattcaagtaaatgcatagagaaaaaaaaaacgtccaggagtgtacact
gatttgaaaaggatggttattgctgaaacaggaagaggggactgggcata
gggctgcggctaaaggataccttcattgaaagtcaactgttactttacaa
atgaatgtgtccatccacagattgggggggggggggcaaatacacacaag
ggtggttttgttttgtttgaagtcacaaggagtaaaattgtggcatttgc
aggaagatactgagatgttaattgaaacaaaccagactcagaaagataag
cacgcgcgcgcacacacatacacacacacacacacacacacacacacaca
catacacacccctgtgaaattaggagagagctataaaagtgaaacaataa
aagcaggggacacagggaaggggtttaggttaacagaagggtgaatatta
taaaagtatgatacgtgtatgtactaaagtgcgatcatgaaagacatcac
tttgtactctacagttgaataatttgagcccctaaagcatggtgatttat
agtttcttttaaaacaaaaaaacaagtgaaccagggctggctcagcagtt
acgagtacttgctgttcagggcatggttgtatactcctttaatccccaca
gaggctgtcagaaccctgtgagtaccaggacatccagggctacatagtga
gaccttgtctcaaaataacaaagtcaaagcaaacaaatgatggagcatgg
ttgctcttccagtgatccgaggttcagttccagcacttagatgacagttc
ataattatctgtaatcccagtcctagagccccattacctttcttctgggc
cttcctcaggctctagaatcaggcatacatggtgtgcaatcagcccgtac
tcattaaaataaataaatcaattaataagtgaatgaatggatgatttgat
ataaaaaaaaaaacaggtgagcccatcccattggcctgaattcttgcgtt
tggcactattctgtggcaga
attgtggggcgatacaaattggtcttctgagctctaggaatagaccacac
atccactctatcttagatggcaagcaaagataaccaatagaggaagcaac
ctgcaagagatgcttgtgcctgtactgtgtggacctccagcacctacctg
agttttagggattctaaatctctaccagattagacttatgcacatccata
aacagtaccaactgaacagtatgcagaaagctgactttgcaaatgtccag
tttattgaagtccattttctattttagtttgtaaacttctctccctgcac
ctcccttcactggggagcctaactgtcccttggaagagttgcacactcac
ctggtgtgtggccttccagcctaatgcagcttgcaatgtgatctgcatgg
tcagaaacctctcctacttaggaaacagccactctccctgattctgtcag
gaaactcggtggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_46977557_46978563
seq2: B6Ng01-251I05.b_47_1066

seq1  GAATTCAAGTAAATGCATAGAGAAAAAAAAAACGTCCAGGAGTGTACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAATGCATAGAGAAAAAAAAAACGTCCAGGAGTGTACACT  50

seq1  GATTTGAAAAGGATGGTTATTGCTGAAACAGGAAGAGGGGACTGGGCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAAAAGGATGGTTATTGCTGAAACAGGAAGAGGGGACTGGGCATA  100

seq1  GGGCTGCGGCTAAAGGATACCTTCATTGAAAGTCAACTGTTACTTTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCGGCTAAAGGATACCTTCATTGAAAGTCAACTGTTACTTTACAA  150

seq1  ATGAATGTGTCCATCCACAGATT-GGGGGGGGGGGGCAAATACACACAAG  199
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATGAATGTGTCCATCCACAGATTGGGGGGGGGGGGGCAAATACACACAAG  200

seq1  GGTGGTTTTGTTTTGTTTGAAGTCACAAGGAGTAAAATTGTGGCATTTGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTTGTTTTGTTTGAAGTCACAAGGAGTAAAATTGTGGCATTTGC  250

seq1  AGGAAGATACTGAGATGTTAATTGAAACAAACCAGACTCAGAAAGATAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGATACTGAGATGTTAATTGAAACAAACCAGACTCAGAAAGATAAG  300

seq1  CACGCGCGCGCACACACATACACACACACACACACACACACACACACACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCGCGCGCACACACATACACACACACACACACACACACACACACACA  350

seq1  CATACACACCCCTGTGAAATTAGGAGAGAGCTATAAAAGTGAAACAATAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACACCCCTGTGAAATTAGGAGAGAGCTATAAAAGTGAAACAATAA  400

seq1  AAGCAGGGGACACAGGGAAGGGGTTTAGGTTAACAGAAGGGTGAATATTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGGGACACAGGGAAGGGGTTTAGGTTAACAGAAGGGTGAATATTA  450

seq1  TAAAAGTATGATACGTGTATGTACTAAAGTGCGATCATGAAAGACATCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTATGATACGTGTATGTACTAAAGTGCGATCATGAAAGACATCAC  500

seq1  TTTGTACTCTACAGTTGAATAATTTGAGCCCCTAAAGCATGGTGATTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACTCTACAGTTGAATAATTTGAGCCCCTAAAGCATGGTGATTTAT  550

seq1  AGTTTCTTTTAAAACAAAAAAACAAGTGAACCAGGGCTGGCTCAGCAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTTTTAAAACAAAAAAACAAGTGAACCAGGGCTGGCTCAGCAGTT  600

seq1  ACGAGTACTTGCTGTTCAGGGCATGGTTGTATACTCCTTTAATCCCCACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGTACTTGCTGTTCAGGGCATGGTTGTATACTCCTTTAATCCCCACA  650

seq1  GAGGCTGTCAGAACCCTGTGAGTACCAGGACATCCAGGGCTACATAGTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTCAGAACCCTGTGAGTACCAGGACATCCAGGGCTACATAGTGA  700

seq1  GACCTTGTCTC-AAATAACAAAGTCAAAGCAAACAAATGATGGAGCATGG  748
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGTCTCAAAATAACAAAGTCAAAGCAAACAAATGATGGAGCATGG  750

seq1  TTGCTCTTCCAGTGATCCGAGGTTCAGTTCCAGCACTTAGATGACAGTTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTCCAGTGATCCGAGGTTCAGTTCCAGCACTTAGATGACAGTTC  800

seq1  ATAATTATCTGTAATCCCAGTCCTAGAG-CCCATTACC-TTCTTCTGG--  844
      |||||||||||||||||||||||||||| ||||||||| |||||||||  
seq2  ATAATTATCTGTAATCCCAGTCCTAGAGCCCCATTACCTTTCTTCTGGGC  850

seq1  CCTCCTCAGGCTCCAGATACAGGCATACAT-GTGTGCAAAACAG-CCGTA  892
      | ||||||||||| |||  ||||||||||| |||||| || ||| |||||
seq2  CTTCCTCAGGCTCTAGAATCAGGCATACATGGTGTGC-AATCAGCCCGTA  899

seq1  CTCATAAAAATAAATAAATAAATAAATAAATGAATGAATGAATGA-ATGA  941
      ||||| ||||||||||||| ||| ||||| |||||||||| ||||  |||
seq2  CTCATTAAAATAAATAAATCAATTAATAAGTGAATGAATGGATGATTTGA  949

seq1  ATTAAAAAAAAAAACAAGTGAG-CCATCCCATCGGCCTG-ACTCTT-CGT  988
        |||||||||||||| ||||| ||||||||| |||||| | |||| |||
seq2  TATAAAAAAAAAAACAGGTGAGCCCATCCCATTGGCCTGAATTCTTGCGT  999

seq1  TTGGCAC-AATCTGT-GCAGA  1007
      ||||||| | ||||| |||||
seq2  TTGGCACTATTCTGTGGCAGA  1020

seq1: chr7_47138463_47138941
seq2: B6Ng01-251I05.g_65_543 (reverse)

seq1  CCCCCCCCCCCCCACCGAGTTTCCTGACAGAATCAGGGAGAGTGGCTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCACCGAGTTTCCTGACAGAATCAGGGAGAGTGGCTGTT  50

seq1  TCCTAAGTAGGAGAGGTTTCTGACCATGCAGATCACATTGCAAGCTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTAGGAGAGGTTTCTGACCATGCAGATCACATTGCAAGCTGCAT  100

seq1  TAGGCTGGAAGGCCACACACCAGGTGAGTGTGCAACTCTTCCAAGGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTGGAAGGCCACACACCAGGTGAGTGTGCAACTCTTCCAAGGGACA  150

seq1  GTTAGGCTCCCCAGTGAAGGGAGGTGCAGGGAGAGAAGTTTACAAACTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCTCCCCAGTGAAGGGAGGTGCAGGGAGAGAAGTTTACAAACTAA  200

seq1  AATAGAAAATGGACTTCAATAAACTGGACATTTGCAAAGTCAGCTTTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAAATGGACTTCAATAAACTGGACATTTGCAAAGTCAGCTTTCTG  250

seq1  CATACTGTTCAGTTGGTACTGTTTATGGATGTGCATAAGTCTAATCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTTCAGTTGGTACTGTTTATGGATGTGCATAAGTCTAATCTGGT  300

seq1  AGAGATTTAGAATCCCTAAAACTCAGGTAGGTGCTGGAGGTCCACACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTAGAATCCCTAAAACTCAGGTAGGTGCTGGAGGTCCACACAGT  350

seq1  ACAGGCACAAGCATCTCTTGCAGGTTGCTTCCTCTATTGGTTATCTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCACAAGCATCTCTTGCAGGTTGCTTCCTCTATTGGTTATCTTTGC  400

seq1  TTGCCATCTAAGATAGAGTGGATGTGTGGTCTATTCCTAGAGCTCAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCTAAGATAGAGTGGATGTGTGGTCTATTCCTAGAGCTCAGAAG  450

seq1  ACCAATTTGTATCGCCCCACAATGAATTC  479
      |||||||||||||||||||||||||||||
seq2  ACCAATTTGTATCGCCCCACAATGAATTC  479