BAC Information

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BAC

Clone NameB6Ng01-251K21
Chromosome7 (Build37)
Map Location 82,133,848 - 82,249,847
singlet/doubletdoublet
Overlap genenone
Upstream geneSt8sia2, LOC100042127, LOC100042140, LOC546979, Slco3a1, EG665308, EG665641, 0610006L08Rik
Downstream geneSv2b, 1500012K07Rik, LOC100042171, Akap13, Klhl25, LOC100042210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251K21.bB6Ng01-251K21.g
ACCGA058875GA058876
length1,1931,159
definitionB6Ng01-251K21.b B6Ng01-251K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,248,655 - 82,249,847)(82,133,848 - 82,135,013)
sequence
gaattcagccatcaagccggcaggaagcacacgtacctgctgagtcatct
tgtcagtctctctttgtgttacactccactgctgcatttctaatggaggg
taactctactcagagttgactggcatctgtattaccagtatcagtgtaga
gaagaaccttttgttttgttttgttttgttttgttttgttttgttttgtt
ttgttttgagacagggtttctctgtatagccctggctatcctggaactca
ctctgtagaccaggctggccttgaactcagaaatccgcctgcctctgcct
cctgagtgctgggattaaaggcgtgtgccaccacgcctggctgagaagaa
cctaagaaacactggagcagattgaatgtggtctggtgtcctggagaccc
acaaatgtataatgagcagttacaggtcaatgccacctgaagtgactgga
ggaaactggagtgtctcacatgggtgaggaaatgggaagagactggacaa
acttcagtaagttactatgtctccaaaattctggcactgaagttcttttg
aggcagcaatggacgatttagaatcatggggcttcatgaactggtcatta
taaatttactttaaaaaatggcagctttgttttaaagaacttctgtttcc
tgagattccagcaagaagaatagagtaccagcaatttgcataatcttgct
tctgaaatcaataatgtattttcatcaaattctcagatttaatttacact
gcatataggatttcccctcaggaaaccaggccaaacagaatgatgttaaa
gagaagtgagagagaatgactgagatcctgggaacagaaaggagacagaa
ggcaagagggccagagcctggaaaggaggccaagtcagaaaggggcagcg
agtggttcacatgggaagcaagaaagagtcatcaccagagattctagaaa
tacagagagaaagtgttcagagatcctgaatcttccaagagctgataaaa
agatccaatcctggccctgaaacacactgtgcctactacaggtcagagtt
acaagaagtgagtctgagcagaagactttcaggtacatgaaaatcaatca
gagtaccatgccttggaaagacatgggtcagaattggaactagcctatct
atggaacctggacattccggcctgaggcttctgactactccct
gaattcctaaaaatcctaaaaaatatcaagtagcactacagaaagccaat
gataaaactgtacaagctgaggtcagaggtcatagctggtaatttaacta
acagacatgaacatgtagccttttaaagccaactgatgcaatcatataga
ttcatctatgatgcaaatgctaggagaatggaaggaatctgcataagttg
acatatgaatacacaacatataactatcatatattactagttctgtatgc
aaaaaatacatatgagttttattatacatccattaaagtaaaatatttat
tattattaaaataaagagagtctgtacattttgagagccagtaaaccact
gctcttcacatcacacaaaaatagaccaaattttcacaaccctaagcact
tattgttagagactcagctagatgtgactgcaggagagaaggaagagtgt
tactgtttgtttggaacagagaagctgctggtgtaagagaaatgtgctag
atctggagatcaaacgcacaggactaggagagctgaaaacggtcatcaga
ggcaggcacaaaacacatggggatttacgttccaggtctgcgccaatcca
cattccctaaaagaacaaacaaacttatagaatgaatatgtgttgcaaag
ggaattagtcatttggctcacaagatacagcctggacaatccaacagtca
cttatatgctggagagactgagaacccagtggctgctcattccacaaagc
taaattcattaccagctccaatctggcactgaaggtctagaggattcctg
gacagctactgatctttagtccagagtggaaagctaaagaggcagcattt
tatagttaggaaaagatgaatgcatcaaaagcatagatgcacccgtaggc
aaggagtggaggcaagcaggaaagggcaacaccgtttttccttagacttc
tttctaacgaggcttcaccagtgggaagagctacccacttctaggggagg
accttacccctgcagttacccgtttgcacctaaggtatattccagatcta
aaaaagattatcatcactagtcccaaaactgatgtgtcaacttactcatg
gagctcaatctctagctgagcagtactttcaatctcagaaagcctaccgt
gaggaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_82248655_82249847
seq2: B6Ng01-251K21.b_42_1234 (reverse)

seq1  AGGGAGT----AGGAGCACCAGCCCGGAATGCTCAG---TCATAGATAGC  43
      |||||||    || |||  ||| ||||||||  |||    ||||||||| 
seq2  AGGGAGTAGTCAGAAGCCTCAGGCCGGAATGTCCAGGTTCCATAGATAGG  50

seq1  TTAGGGTCCATTTCTGACCCATGTCTTTTCCAGGCATTGTGTACTCTGA-  92
       || | |||| ||||||||||||||||| | ||||||   ||||||||| 
seq2  CTA-GTTCCAATTCTGACCCATGTCTTTCCAAGGCAT--GGTACTCTGAT  97

seq1  TGGTTTTCATGTACCTGAAAGTCTTCCTGCCTCCAGGCTCAACTTC-TGT  141
      || |||||||||||||||||||||| ||||   ||| ||| ||||| |||
seq2  TGATTTTCATGTACCTGAAAGTCTT-CTGC--TCAGACTC-ACTTCTTGT  143

seq1  ACCTCTGACCTGTTGGTAGGCACAGTGTTGTTTCAGGCCCAGGATTGGAT  191
      | |||||||||| | |||||||||||| ||||||||| ||||||||||||
seq2  AACTCTGACCTG-TAGTAGGCACAGTG-TGTTTCAGGGCCAGGATTGGAT  191

seq1  CTTTTTATTCAGCCTCTTGGAAGATTCAGGATCTCTGAACACTTTCTCTC  241
      ||||||| |||| |||||||||||||||||||||||||||||||||||||
seq2  CTTTTTA-TCAG-CTCTTGGAAGATTCAGGATCTCTGAACACTTTCTCTC  239

seq1  TGTATTTCTAGAATCTCTGGTGATGACCTCTTTCTTGCTT-CCATGTGAA  290
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TGTATTTCTAGAATCTCTGGTGATGA-CTCTTTCTTGCTTCCCATGTGAA  288

seq1  CCACTCGCTGCCCCCTTCTGACTTGGCCTCC-TTCCAGGCTCTGGCCCTC  339
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  CCACTCGCTGCCCCTTTCTGACTTGGCCTCCTTTCCAGGCTCTGGCCCTC  338

seq1  TTGCCTTCTGTCTCC-TTCTGTTCCCAGGATCTCAGTCATTCTCTCTCAC  388
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCTGTCTCCTTTCTGTTCCCAGGATCTCAGTCATTCTCTCTCAC  388

seq1  TTCTCTTTAACATCATTCTGTTTGGCCTGGTTTCCTGAGGGGAAATCCTA  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTAACATCATTCTGTTTGGCCTGGTTTCCTGAGGGGAAATCCTA  438

seq1  TATGCAGTGTAAATTAAATCTGAGAATTTGATGAAAATACATTATTGATT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGTGTAAATTAAATCTGAGAATTTGATGAAAATACATTATTGATT  488

seq1  TCAGAAGCAAGATTATGCAAATTGCTGGTACTCTATTCTTCTTGCTGGAA  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGCAAGATTATGCAAATTGCTGGTACTCTATTCTTCTTGCTGGAA  538

seq1  TCTCAGGAAACAGAAGTTCTTTAAAACAAAGCTGCCATTTTTTAAAGTAA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAAACAGAAGTTCTTTAAAACAAAGCTGCCATTTTTTAAAGTAA  588

seq1  ATTTATAATGACCAGTTCATGAAGCCCCATGATTCTAAATCGTCCATTGC  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAATGACCAGTTCATGAAGCCCCATGATTCTAAATCGTCCATTGC  638

seq1  TGCCTCAAAAGAACTTCAGTGCCAGAATTTTGGAGACATAGTAACTTACT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAAAAGAACTTCAGTGCCAGAATTTTGGAGACATAGTAACTTACT  688

seq1  GAAGTTTGTCCAGTCTCTTCCCATTTCCTCACCCATGTGAGACACTCCAG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTGTCCAGTCTCTTCCCATTTCCTCACCCATGTGAGACACTCCAG  738

seq1  TTTCCTCCAGTCACTTCAGGTGGCATTGACCTGTAACTGCTCATTATACA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCAGTCACTTCAGGTGGCATTGACCTGTAACTGCTCATTATACA  788

seq1  TTTGTGGGTCTCCAGGACACCAGACCACATTCAATCTGCTCCAGTGTTTC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGTCTCCAGGACACCAGACCACATTCAATCTGCTCCAGTGTTTC  838

seq1  TTAGGTTCTTCTCAGCCAGGCGTGGTGGCGCACGCCTTTAATCCCAGCAC  888
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTAGGTTCTTCTCAGCCAGGCGTGGTGGCACACGCCTTTAATCCCAGCAC  888

seq1  TCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGCAGAGGCAGGCGGATTTCTGAGTTCAAGGCCAGCCTGGTCTA  938

seq1  CAGAGTGAGTTCCAGGATAGCCAGGGCTATACAGAGAAACCCTGTCTCAA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGAGTTCCAGGATAGCCAGGGCTATACAGAGAAACCCTGTCTCAA  988

seq1  AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAGGT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAACAAAAGGT  1038

seq1  TCTTCTCTACACTGATACTGGTAATACAGATGCCAGTCAACTCTGAGTAG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTACACTGATACTGGTAATACAGATGCCAGTCAACTCTGAGTAG  1088

seq1  AGTTACCCTCCATTAGAAATGCAGCAGTGGAGTGTAACACAAAGAGAGAC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCCTCCATTAGAAATGCAGCAGTGGAGTGTAACACAAAGAGAGAC  1138

seq1  TGACAAGATGACTCAGCAGGTACGTGTGCTTCCTGCCGGCTTGATGGCTG  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGATGACTCAGCAGGTACGTGTGCTTCCTGCCGGCTTGATGGCTG  1188

seq1  AATTC  1193
      |||||
seq2  AATTC  1193

seq1: chr7_82133848_82135013
seq2: B6Ng01-251K21.g_68_1226

seq1  GAATTCCTAAAAATCCTAAAAAATATCAAGTAGCACTACAGAAAGCCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAAAAATCCTAAAAAATATCAAGTAGCACTACAGAAAGCCAAT  50

seq1  GATAAAACTGTACAAGCTGAGGTCAGAGGTCATAGCTGGTAATTTAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACTGTACAAGCTGAGGTCAGAGGTCATAGCTGGTAATTTAACTA  100

seq1  ACAGACATGAACATGTAGCCTTTTAAAGCCAACTGATGCAATCATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATGAACATGTAGCCTTTTAAAGCCAACTGATGCAATCATATAGA  150

seq1  TTCATCTATGATGCAAATGCTAGGAGAATGGAAGGAATCTGCATAAGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTATGATGCAAATGCTAGGAGAATGGAAGGAATCTGCATAAGTTG  200

seq1  ACATATGAATACACAACATATAACTATCATATATTACTAGTTCTGTATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGAATACACAACATATAACTATCATATATTACTAGTTCTGTATGC  250

seq1  AAAAAATACATATGAGTTTTATTATACATCCATTAAAGTAAAATATTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATACATATGAGTTTTATTATACATCCATTAAAGTAAAATATTTAT  300

seq1  TATTATTAAAATAAAGAGAGTCTGTACATTTTGAGAGCCAGTAAACCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAAAATAAAGAGAGTCTGTACATTTTGAGAGCCAGTAAACCACT  350

seq1  GCTCTTCACATCACACAAAAATAGACCAAATTTTCACAACCCTAAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCACATCACACAAAAATAGACCAAATTTTCACAACCCTAAGCACT  400

seq1  TATTGTTAGAGACTCAGCTAGATGTGACTGCAGGAGAGAAGGAAGAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAGAGACTCAGCTAGATGTGACTGCAGGAGAGAAGGAAGAGTGT  450

seq1  TACTGTTTGTTTGGAACAGAGAAGCTGCTGGTGTAAGAGAAATGTGCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGTTTGGAACAGAGAAGCTGCTGGTGTAAGAGAAATGTGCTAG  500

seq1  ATCTGGAGATCAAACGCACAGGACTAGGAGAGCTGAAAACGGTCATCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGAGATCAAACGCACAGGACTAGGAGAGCTGAAAACGGTCATCAGA  550

seq1  GGCAGGCACAAAACACATGGGGATTTACGTTCCAGGTCTGCGCCAATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCACAAAACACATGGGGATTTACGTTCCAGGTCTGCGCCAATCCA  600

seq1  CATTCCCTAAAAGAACAAACAAACTTATAGAATGAATATGTGTTGCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCCTAAAAGAACAAACAAACTTATAGAATGAATATGTGTTGCAAAG  650

seq1  GGAATTAGTCATTTGGCTCACAAGATACAGCCTGGACAATCCAACAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAGTCATTTGGCTCACAAGATACAGCCTGGACAATCCAACAGTCA  700

seq1  CTTATATGCTGGAGAGACTGAGAACCCAGTGGCTGCTCATTCCACAAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATATGCTGGAGAGACTGAGAACCCAGTGGCTGCTCATTCCACAAAGC  750

seq1  TAAATTCATTACCAGCTCCAATCTGGCACTGAAGGTCTAGAGGATTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCATTACCAGCTCCAATCTGGCACTGAAGGTCTAGAGGATTCCTG  800

seq1  GACAGCTACTGATCTTTAGTCCAGAGTGGAAAGCTAAAGAGGCAGCATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTACTGATCTTTAGTCCAGAGTGGAAAGCTAAAGAGGCAGCATTT  850

seq1  TATAGTTAGGAAAAGATGAATGCATCAAAAGCATAGATGCACCCGTAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTAGGAAAAGATGAATGCATCAAAAGCATAGATGCACCCGTAGGC  900

seq1  AAGGAGTGGAGGCAAGCAGGAAAGGGCAACACCG-TTTTCCTTAGACTTC  949
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGGAGTGGAGGCAAGCAGGAAAGGGCAACACCGTTTTTCCTTAGACTTC  950

seq1  TTTCTAACGAGGCTTCACCAGTGGGAAGAGCTACCCAC-TCTAGGGGAGG  998
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTTCTAACGAGGCTTCACCAGTGGGAAGAGCTACCCACTTCTAGGGGAGG  1000

seq1  ACCTTACCCCTGCAGTTACCCGTTTGCACCTAAAGGTATATTTCCAGATC  1048
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  ACCTTACCCCTGCAGTTACCCGTTTGCACCT-AAGGTATA-TTCCAGATC  1048

seq1  TAAAAAAGATTAACCATCACTAGTCCCAAAACCTGATGTGTCACCTAACT  1098
      ||||||||||| | ||||||||||||||||| ||||||||||| || |||
seq2  TAAAAAAGATT-ATCATCACTAGTCCCAAAA-CTGATGTGTCAACTTACT  1096

seq1  CCTTGAAGCCTCAAATCTCTAGCCTGAGCAAGTACTTTTCAATCTCAGAA  1148
      | | ||   ||| ||||||||| |||||| ||||| |||||||||||| |
seq2  CATGGA--GCTC-AATCTCTAG-CTGAGC-AGTAC-TTTCAATCTCAG-A  1139

seq1  AAGCATAC--TGAGGAATAT  1166
      |||| |||  ||||||||||
seq2  AAGCCTACCGTGAGGAATAT  1159