BAC Information

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BAC

Clone NameB6Ng01-251M23
Chromosome7 (Build37)
Map Location 50,829,151 - 50,989,069
singlet/doubletdoublet
Overlap geneBC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece, Atpbd3, Klk14, Klk13
Upstream geneEG637776, C330019L16Rik, EG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33
Downstream geneKlk12, Klk11, Klk10, Klk9, Klk8, Klk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251M23.bB6Ng01-251M23.g
ACCGA058971GA058972
length1,1791,139
definitionB6Ng01-251M23.b B6Ng01-251M23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,987,896 - 50,989,069)(50,829,151 - 50,830,282)
sequence
gaattcctcttgtgtgggaagtgaatgaagtcctgggtgactgtgctatt
gacatgaacacagctgtctcaaggacctcaatgcctcagacccataggaa
taatgaaaccttccccagataaggctcagcaaaatgataatgcttcccct
tggtccttgtccagatgttgacagtgtgcaccgaaaatgtcaacaacatc
ttcctcctcccaggtgtttacaacctgagaccgcgcccatacagacacct
cccaactgagattagctaaacctgccttctggttcagctgtacatgacaa
acctattccctcgattgatatttataaaataaaatcactgagttttctgg
gttgctgttgttactgagtttccatcagagcgcaccatgggccacaccat
cccagctttcttgtatctgtgagtgtattttagttactgttctattgctg
tgaagagacactgtgatcaaggaaactttgataagaaagcatttaattgg
ggccctgcttagtttcagagggttagtccatgatcgctgtggcgggaagc
ttggtggctggcaggaaagcatggtgctggatcagtagcacatcctaatc
tgcaggcaggaggcagggagaggatgggtgctgagtgagcttaaaacccc
agtggctcatctcctcctaatctttcccaaacagttctactaactgggac
caaacattcaaatgtgtgagtctacggaggccattctcattggaaccatc
atgatgtgtgtcatttcttcattccctgtcaccccacttagtcctgtccc
taaaccaggcatgtagtgccatgctcacttaatgataaccaatacagaag
acgtctgccaccttcagaagatgtagtgatgtcacctgagccagttctgc
agtgggtgccagtggtctgttgcattagttgttgtattggttacttttgt
cattgctgtgacaatagtgacttggggggaaggaatggttttattttggc
tcatagttcagggcatcacctgtcatggtgggggaagacatgtcaccaga
acttgaaggtccctggtcaccttgcatctgagtcaaaaattggtggaaat
acttgcacttcaaccatcttcagtgtaactcagaaaggtatctctagcct
ctggaatggtgtttagggtggggtcctct
gaattcccacagatgcagcgactgtgggaaatcgttcacttacgcatccc
aactgaagatgcaccgtcgggttcacacgggggagaagccctacaagtgc
cgggactgtgggaagtcctttacgtactcattcacgctgaatgtgcatcg
ccgaattcacaaggtggagaagcctcacaagtgcagcatctgtgggaaag
ctttggcgtctaagtaccaactggaagagcatgagcgaattcacacagga
gagaagccttacgtgtgtactgaatgtggaaaaggcttccatggtaggtc
aggtttcctaagacatcagattactcacacgagggataaacctttcgtct
gtcataaatgtgggaaggccttctttcagaggtcacagctgacatctcat
cagcagactcacacaggagagaagccttatacgtgccattactgcgggaa
atcattcagtcacacatcccagctgacggtccatcatcgaattcacacag
gggagagaccttacaaatgcgactattgtgcgaagtcgttcagcaactcc
tcccaactgaaagagcatctccgcattcataccggggagacgccttatgc
atgttccgaatgtgggaaggccttcagccgacgatcgtccctcaatctac
acacgaaaattcatactggagaaaaacaccatatatgtagtgagtgtggg
aaagcctttagtcagaagtcagtactgcggacacatcagagaatacacac
tgggggaaaagccttacaaatgcagtgactgtgggaaggccctggcttca
aagggccaacttcgagatcatcagcggattcacactggcgagaaacccta
catgtgccctgaatgtgggaagggtttcttttggcaggtcgtctttgcat
agacatcagataactcacactaaaggagagaccttttgtctgtcaaaatg
cgggaagacctttcattcagaagtcagcactgacgtcccatcagcaaatt
cacacagcgagagccctatgtgtgctcttgagtgtgggaagggctttcta
caatagtcattctttaacttagcatcagatgacctccacactgaggggga
gatctttttgtctgtccaaatggtgggaaggcattcctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_50987896_50989069
seq2: B6Ng01-251M23.b_47_1225 (reverse)

seq1  AAAGGA-CCCACCCTAAACACCATTCCAGAGGCT-GAGGTTCCCTTCTGA  48
      | |||| ||||||||||||||||||||||||||| ||| | || ||||||
seq2  AGAGGACCCCACCCTAAACACCATTCCAGAGGCTAGAGATACCTTTCTGA  50

seq1  GTACAAACTGAAAGTAGCTGAA-TGCAAGTATT--CACCCATTTCTGACT  95
      ||  | ||||||  | | |||| ||||||||||  |||| |||| |||| 
seq2  GT-TACACTGAAGATGGTTGAAGTGCAAGTATTTCCACCAATTTTTGAC-  98

seq1  TCAGATGC-AGGTGACCAAGGACC-TCAAGTTCCTGGTGACATGTCTT-C  142
      |||||||| ||||||||| ||||| ||||||| ||||||||||||||| |
seq2  TCAGATGCAAGGTGACCAGGGACCTTCAAGTT-CTGGTGACATGTCTTCC  147

seq1  CCCACCATGACAGGTGATGCCCTTGAACTATGAGCCAAAAT-AAACCATT  191
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  CCCACCATGACAGGTGATGCCC-TGAACTATGAGCCAAAATAAAACCATT  196

seq1  CCTTCCCCCCAAGTCACTATTGTCACAGCAATGACAAAAGTAACCAATAC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCCCAAGTCACTATTGTCACAGCAATGACAAAAGTAACCAATAC  246

seq1  AACAACTAATGCAACAGACCACTGGCACCCACTGCAGAACTGGCTCAGGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTAATGCAACAGACCACTGGCACCCACTGCAGAACTGGCTCAGGT  296

seq1  GACATCACTACATCTTCTGAAGGTGGCAGACGTCTTCTGTATTGGTTATC  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCACTACATCTTCTGAAGGTGGCAGACGTCTTCTGTATTGGTTATC  346

seq1  ATTAAGTGAGCATGGCACTACATGCCTGGTTTAGGGACAGGACTAAGTGG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTGAGCATGGCACTACATGCCTGGTTTAGGGACAGGACTAAGTGG  396

seq1  GGTGACAGGGAATGAAGAAATGACACACATCATGATGGTTCCAATGAGAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGGGAATGAAGAAATGACACACATCATGATGGTTCCAATGAGAA  446

seq1  TGGCCTCCGTAGACTCACACATTTGAATGTTTGGTCCCAGTTAGTAGAAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCCGTAGACTCACACATTTGAATGTTTGGTCCCAGTTAGTAGAAC  496

seq1  TGTTTGGGAAAGATTAGGAGGAGATGAGCCACTGGGGTTTTAAGCTCACT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGGAAAGATTAGGAGGAGATGAGCCACTGGGGTTTTAAGCTCACT  546

seq1  CAGCACCCATCCTCTCCCTGCCTCCTGCCTGCAGATTAGGATGTGCTACT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCCATCCTCTCCCTGCCTCCTGCCTGCAGATTAGGATGTGCTACT  596

seq1  GATCCAGCACCATGCTTTCCTGCCAGCCACCAAGCTTCCCGCCACAGCGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCAGCACCATGCTTTCCTGCCAGCCACCAAGCTTCCCGCCACAGCGA  646

seq1  TCATGGACTAACCCTCTGAAACTAAGCAGGGCCCCAATTAAATGCTTTCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACTAACCCTCTGAAACTAAGCAGGGCCCCAATTAAATGCTTTCT  696

seq1  TATCAAAGTTTCCTTGATCACAGTGTCTCTTCACAGCAATAGAACAGTAA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGTTTCCTTGATCACAGTGTCTCTTCACAGCAATAGAACAGTAA  746

seq1  CTAAAATACACTCACAGATACAAGAAAGCTGGGATGGTGTGGCCCATGGT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATACACTCACAGATACAAGAAAGCTGGGATGGTGTGGCCCATGGT  796

seq1  GCGCTCTGATGGAAACTCAGTAACAACAGCAACCCAGAAAACTCAGTGAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCTGATGGAAACTCAGTAACAACAGCAACCCAGAAAACTCAGTGAT  846

seq1  TTTATTTTATAAATATCAATCGAGGGAATAGGTTTGTCATGTACAGCTGA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATAAATATCAATCGAGGGAATAGGTTTGTCATGTACAGCTGA  896

seq1  ACCAGAAGGCAGGTTTAGCTAATCTCAGTTGGGAGGTGTCTGTATGGGCG  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAGGCAGGTTTAGCTAATCTCAGTTGGGAGGTGTCTGTATGGGCG  946

seq1  CGGTCTCAGGTTGTAAACACCTGGGAGGAGGAAGATGTTGTTGACATTTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTCAGGTTGTAAACACCTGGGAGGAGGAAGATGTTGTTGACATTTT  996

seq1  CGGTGCACACTGTCAACATCTGGACAAGGACCAAGGGGAAGCATTATCAT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGCACACTGTCAACATCTGGACAAGGACCAAGGGGAAGCATTATCAT  1046

seq1  TTTGCTGAGCCTTATCTGGGGAAGGTTTCATTATTCCTATGGGTCTGAGG  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAGCCTTATCTGGGGAAGGTTTCATTATTCCTATGGGTCTGAGG  1096

seq1  CATTGAGGTCCTTGAGACAGCTGTGTTCATGTCAATAGCACAGTCACCCA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGGTCCTTGAGACAGCTGTGTTCATGTCAATAGCACAGTCACCCA  1146

seq1  GGACTTCATTCACTTCCCACACAAGAGGAATTC  1174
      |||||||||||||||||||||||||||||||||
seq2  GGACTTCATTCACTTCCCACACAAGAGGAATTC  1179

seq1: chr7_50829151_50830282
seq2: B6Ng01-251M23.g_66_1204

seq1  GAATTCCCACAGATGCAGCGACTGTGGGAAATCGTTCACTTACGCATCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACAGATGCAGCGACTGTGGGAAATCGTTCACTTACGCATCCC  50

seq1  AACTGAAGATGCACCGTCGGGTTCACACGGGGGAGAAGCCCTACAAGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGATGCACCGTCGGGTTCACACGGGGGAGAAGCCCTACAAGTGC  100

seq1  CGGGACTGTGGGAAGTCCTTTACGTACTCATTCACGCTGAATGTGCATCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGACTGTGGGAAGTCCTTTACGTACTCATTCACGCTGAATGTGCATCG  150

seq1  CCGAATTCACAAGGTGGAGAAGCCTCACAAGTGCAGCATCTGTGGGAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATTCACAAGGTGGAGAAGCCTCACAAGTGCAGCATCTGTGGGAAAG  200

seq1  CTTTGGCGTCTAAGTACCAACTGGAAGAGCATGAGCGAATTCACACAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGCGTCTAAGTACCAACTGGAAGAGCATGAGCGAATTCACACAGGA  250

seq1  GAGAAGCCTTACGTGTGTACTGAATGTGGAAAAGGCTTCCATGGTAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCCTTACGTGTGTACTGAATGTGGAAAAGGCTTCCATGGTAGGTC  300

seq1  AGGTTTCCTAAGACATCAGATTACTCACACGAGGGATAAACCTTTCGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCTAAGACATCAGATTACTCACACGAGGGATAAACCTTTCGTCT  350

seq1  GTCATAAATGTGGGAAGGCCTTCTTTCAGAGGTCACAGCTGACATCTCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAAATGTGGGAAGGCCTTCTTTCAGAGGTCACAGCTGACATCTCAT  400

seq1  CAGCAGACTCACACAGGAGAGAAGCCTTATACGTGCCATTACTGCGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGACTCACACAGGAGAGAAGCCTTATACGTGCCATTACTGCGGGAA  450

seq1  ATCATTCAGTCACACATCCCAGCTGACGGTCCATCATCGAATTCACACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCAGTCACACATCCCAGCTGACGGTCCATCATCGAATTCACACAG  500

seq1  GGGAGAGACCTTACAAATGCGACTATTGTGCGAAGTCGTTCAGCAACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGACCTTACAAATGCGACTATTGTGCGAAGTCGTTCAGCAACTCC  550

seq1  TCCCAACTGAAAGAGCATCTCCGCATTCATACCGGGGAGACGCCTTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTGAAAGAGCATCTCCGCATTCATACCGGGGAGACGCCTTATGC  600

seq1  ATGTTCCGAATGTGGGAAGGCCTTCAGCCGACGATCGTCCCTCAATCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCGAATGTGGGAAGGCCTTCAGCCGACGATCGTCCCTCAATCTAC  650

seq1  ACACGAAAATTCATACTGGAGAAAAACACCATATATGTAGTGAGTGTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGAAAATTCATACTGGAGAAAAACACCATATATGTAGTGAGTGTGGG  700

seq1  AAAGCCTTTAGTCAGAAGTCAGTACTGCGGACACATCAGAGAATACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTTTAGTCAGAAGTCAGTACTGCGGACACATCAGAGAATACACAC  750

seq1  T-GGGGAAAAGCCTTACAAATGCAGTGACTGTGGGAAGGCCCTGGCTTCA  799
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAAAAGCCTTACAAATGCAGTGACTGTGGGAAGGCCCTGGCTTCA  800

seq1  AAGGGCCAACTTCGAGATCATCAGCGGATTCACACTGGCGAGAAACCCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCAACTTCGAGATCATCAGCGGATTCACACTGGCGAGAAACCCTA  850

seq1  CATGTGCCCTGAATGTGGGAAGGGTTTC-TTTGGCAGGTCGTCTTTGCAT  898
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGTGCCCTGAATGTGGGAAGGGTTTCTTTTGGCAGGTCGTCTTTGCAT  900

seq1  AGACATCAGATAACTCACACT-AAGGAGAGACCTTTTGTCTGTCAAAAAT  947
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  AGACATCAGATAACTCACACTAAAGGAGAGACCTTTTGTCTGTC-AAAAT  949

seq1  GCGGGAAGACC-TTCATCCAGAAGTCAGCACTGACGTCCCATCAGCAAAT  996
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  GCGGGAAGACCTTTCATTCAGAAGTCAGCACTGACGTCCCATCAGCAAAT  999

seq1  TCACACAGGCGAGAAGCCCTATGTGTGC-CCTGAGTGTGGGAAGGGC-TT  1044
      ||||||| ||||| |||||||||||||| | |||||||||||||||| ||
seq2  TCACACA-GCGAG-AGCCCTATGTGTGCTCTTGAGTGTGGGAAGGGCTTT  1047

seq1  CTACAATAAGTCA-TCTTTACCTAGGCATCAGATGAC--TCACACT-AGG  1090
      ||||||| ||||| |||||| ||  ||||||||||||   |||||| |||
seq2  CTACAAT-AGTCATTCTTTAACTTAGCATCAGATGACCTCCACACTGAGG  1096

seq1  GGGAGATC-TTTTGTCTGTCAAAAATGTGGGAAGGCATTCCTC  1132
      |||||||| ||||||||||| |||  |||||||||||||||||
seq2  GGGAGATCTTTTTGTCTGTCCAAATGGTGGGAAGGCATTCCTC  1139