BAC Information

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BAC

Clone NameB6Ng01-252D20
Chromosome7 (Build37)
Map Location 66,701,348 - 66,702,421
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a
Downstream geneLOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1, LOC664788, Snrpn, Snurf, EG664849
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252D20.bB6Ng01-252D20.g
ACCGA059289GA059290
length1,0751,204
definitionB6Ng01-252D20.b B6Ng01-252D20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaataaagatttactgcttcctctcgaagcaacagccacatcac
atgtgaccttagcctcacaaagttgtagtatcaacactcaagttgagctg
cccaagttctatggataggacaaaaaaataattgaataaaacaactacag
ataggtatttcgagggtgattaaagtaactgtgtgtttttgctcaaagtg
caaatgtggcatcagacctctgtaaggtctatgttgtaaggcccgactca
acgtgacaggtgattcctgaaaatctcccgagaatcctggcccaggccag
agaacccatgtctatacatgggtccatttgtgtcaaggtgttatgggttg
ccctgctgtaaaacttgagagtaaccactgttcctggactcaagtcaggg
cttggtgttatgaatcaaagtggaattaggttctttaaacacctggcctt
accctgtatcaaactaatgtgtagagctttttttcctcagtgattctgca
gtgaggttcagtaagtgccccaaatgataccatgaaggaaatttggaatg
tggtgggcaccaaggtaaaaattaatatctcaccctttccacatgggtaa
attgtctctggggtgagatctttggaatatctgctagagtgattgccctt
tatgaacccatcctggggaggacagcctttttggatatcatagaatcctt
tttttgccctaagaaaggctctgtcacatgggcctcccctgtcaagggaa
aggaagagtcccataaggccctggaggccagtgttgtcctcctgtagtta
tttgccatggaattgttaagcatcaaagtatgagatgcccaatattcaaa
aatgtcatcctcctctctccatgagaagtaggtcaaaattatgaaaaaac
aattataggggagttgaacacattcctttaaatcgttacaaaccaaggga
tgtacatcgggagaaacatagcctaaattcgagctccttggttagcgttt
gcataccattttgttatccccaaattccaaaggacgactggcgaaattga
aagcgaatcatgacggggaggtcac
gaattccctgaagtccttagatgccctttccctgtttcccgtgagaggaa
atgtggacatctagggtgcacattggttggcaaacactgcatgccaacaa
gcacctagtcccacaatggaaccttgggcatttctgcaaggatcgcccct
tgctcatgataatgtcttttctggtgttttgcagtcatctcacatgccac
cttggaaggcagagaaacacagataatcaggtaagtggtcagaacatggt
aaagcctccacatccaggtgacctcccccttcatgatttggctttcaatt
ctcagccagtctgttcttttgcaatttggggataacaaaatggtatgcaa
cggttccaaaggtgctcgatttaggctatgttctcccatgtagatcccct
ggtttgtaaagctttaaggaatgtgttcaactcccgataattgtttttga
ataattttgacgtacttctcatggagagaggaggatgatattttttgaat
gttgggatctcatactttgatgcttacaattccatggcaaatatctacag
gaggacagcacagaactcccgggccttatggtatgcttcttttcccttga
aaggggaggccgaagtgacagtgcctttttttagggaaaaagaaggattc
tatgatatccaaaaggctgtcctccccaggaagggttcacaaagggcaat
ccctctagcagatattccaaagatctcaccccagagacaatttaccaatg
tggatagggtgagatattcatttttaccttggtgcccaccacattccaaa
ttttccttcatggtatcatttagggcacttactgaaccctcactgcagaa
tcactgaggaaaaaaagctctacacattaaggtttgatacagggtaaggc
caggtgtttaaagaacctaatttccacttttgattcatacaccaaggtcc
tgacttgagtccagcaacagtgctttacactcacgtttttacagcagggc
accccataacacgtgaccacaatggatacatgtaatagacatgggttctg
gtgctggtcaggaattctcgggagatttcagggatcacgtcacgttgaag
tcggttctacacatagactaacgaagcctgaatgccccattggcacttgg
actaaaccagtaccttatcacgtcgaatccatactgggatgtgtgtatca
catg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_66701348_66702421
seq2: B6Ng01-252D20.b_47_1121

seq1  GAATTCCAATAAAGATTTACTGCTTCCTCTCGAAGCAACAGCCACATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATAAAGATTTACTGCTTCCTCTCGAAGCAACAGCCACATCAC  50

seq1  ATGTGACCTTAGCCTCACAAAGTTGTAGTATCAACACTCAAGTTGAGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACCTTAGCCTCACAAAGTTGTAGTATCAACACTCAAGTTGAGCTG  100

seq1  CCCAAGTTCTATGGATAGGACAAAAAAATAATTGAATAAAACAACTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTCTATGGATAGGACAAAAAAATAATTGAATAAAACAACTACAG  150

seq1  ATAGGTATTTCGAGGGTGATTAAAGTAACTGTGTGTTTTTGCTCAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTATTTCGAGGGTGATTAAAGTAACTGTGTGTTTTTGCTCAAAGTG  200

seq1  CAAATGTGGCATCAGACCTCTGTAAGGTCTATGTTGTAAGGCCCGACTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGGCATCAGACCTCTGTAAGGTCTATGTTGTAAGGCCCGACTCA  250

seq1  ACGTGACAGGTGATTCCTGAAAATCTCCCGAGAATCCTGGCCCAGGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGACAGGTGATTCCTGAAAATCTCCCGAGAATCCTGGCCCAGGCCAG  300

seq1  AGAACCCATGTCTATACATGGGTCCATTTGTGTCAAGGTGTTATGGGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCATGTCTATACATGGGTCCATTTGTGTCAAGGTGTTATGGGTTG  350

seq1  CCCTGCTGTAAAACTTGAGAGTAACCACTGTTCCTGGACTCAAGTCAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTGTAAAACTTGAGAGTAACCACTGTTCCTGGACTCAAGTCAGGG  400

seq1  CTTGGTGTTATGAATCAAAGTGGAATTAGGTTCTTTAAACACCTGGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGTTATGAATCAAAGTGGAATTAGGTTCTTTAAACACCTGGCCTT  450

seq1  ACCCTGTATCAAACTAATGTGTAGAGCTTTTTTTCCTCAGTGATTCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTATCAAACTAATGTGTAGAGCTTTTTTTCCTCAGTGATTCTGCA  500

seq1  GTGAGGTTCAGTAAGTGCCCCAAATGATACCATGAAGGAAATTTGGAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTTCAGTAAGTGCCCCAAATGATACCATGAAGGAAATTTGGAATG  550

seq1  TGGTGGGCACCAAGGTAAAAATTAATATCTCACCCTTTCCACATGGGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGCACCAAGGTAAAAATTAATATCTCACCCTTTCCACATGGGTAA  600

seq1  ATTGTCTCTGGGGTGAGATCTTTGGAATATCTGCTAGAGTGATTGCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTCTGGGGTGAGATCTTTGGAATATCTGCTAGAGTGATTGCCCTT  650

seq1  TATGAACCCATCCTGGGGAGGACAGCCTTTTTGGATATCATAGAATCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACCCATCCTGGGGAGGACAGCCTTTTTGGATATCATAGAATCCTT  700

seq1  TTTTTGCCCTAAGAAAGGCTCTGTCACATGGGCCTCCCCTGTCAAGGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCCTAAGAAAGGCTCTGTCACATGGGCCTCCCCTGTCAAGGGAA  750

seq1  AGGAAGAGTCCCATAAGGCCCTGGAGGCCAGTGTTGTCCTCCTGTAGTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGTCCCATAAGGCCCTGGAGGCCAGTGTTGTCCTCCTGTAGTTA  800

seq1  TTTGCCATGGAATTG-TAAGCATCAAAGTATGAGATG-CCAATATTCAAA  848
      ||||||||||||||| ||||||||||||||||||||| ||||||||| ||
seq2  TTTGCCATGGAATTGTTAAGCATCAAAGTATGAGATGCCCAATATTC-AA  849

seq1  AAATGTCATCCTCCTCTCTCCATGAGAAGTAGGTCAAAATTATGAAAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCATCCTCCTCTCTCCATGAGAAGTAGGTCAAAATTATGAAAAAA  899

seq1  CAATTATA-GGGAGTTGAACACATTCC-TTAAATCGTTACAAACCAGGGG  946
      |||||||| |||||||||||||||||| |||||||||||||||||| |||
seq2  CAATTATAGGGGAGTTGAACACATTCCTTTAAATCGTTACAAACCAAGGG  949

seq1  ATGTACATC-GGAG-AACATAGCCTAAA-TCGAGCTCCTTTGGTA-CCTT  992
      ||||||||| |||| ||||||||||||| ||||||||||| | || | ||
seq2  ATGTACATCGGGAGAAACATAGCCTAAATTCGAGCTCCTTGGTTAGCGTT  999

seq1  TGCATACCATTTTGTTATCCCCAAATTCCAAAAGGACCGACTGGCCGAGA  1042
      ||||||||||||||||||||||||||||| |||||| ||||||| ||| |
seq2  TGCATACCATTTTGTTATCCCCAAATTCC-AAAGGA-CGACTGG-CGA-A  1045

seq1  ATTGAAAGCGAAATCATGAAGGGGGAGGTCAC  1074
      |||||||||| ||||||| | |||||||||||
seq2  ATTGAAAGCG-AATCATG-ACGGGGAGGTCAC  1075