BAC Information

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BAC

Clone NameB6Ng01-252E20
Chromosome7 (Build37)
Map Location 100,349,076 - 100,350,277
singlet/doubletsinglet
Overlap genenone
Upstream geneDlg2, Ccdc90b, Ankrd42, Pcf11, LOC676240, LOC100040007, 4632427E13Rik, Rab30, 4632434I11Rik, Prcp, A830059I20Rik, LOC100040298
Downstream geneLOC666783, EG638305, EG545982
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252E20.bB6Ng01-252E20.g
ACCGA059335GA059336
length1,2091,185
definitionB6Ng01-252E20.b B6Ng01-252E20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatgggaaataactgtccctaaagactttaaaactgatgctt
tgttctagcttccttgaaagttctttttgactgtcttagggttactatta
ctgtgacaaaacaccatgaccaaagcaacatggggaagaaagggtttatt
tggcttatcattatcaaaggatgtcaggataggaactcaaattgggcaag
ttcctagagacaggagctgttgcagaggccatggactagtgtggcttact
ggcttctccccatgatttgctaagctgctatcttatagaacctaggacca
ccagcccagagatggtctcacccacattgggctaggctctcccctataaa
tcagtgagatacaccactggcttacctacagaccaaccttatggagactt
ttgttaagttttgctttgctttacagtctaatttcttcttcttctttttt
tattggatattttctttatttacatttaaaatttatccccttttctggtt
tcccctctgaaaaacaccatccccctcccctccccctgcttaccaaccca
cccactccctcttccaggccctggcattcccccacactggggcatagagc
cttcataggacaaagggcctcttccccattgatgtcccattaggccatct
tctgctgcgtatgcagctggagccatgagtcccaccatgtgtgccctttg
gttggtggtttagtcctagggagctttggggatactggttagttcatatt
gttgtaccttctatggggctgcaaaccccttcagctccttaggtcctttc
tctagctcattcactggggaccctatgctcagtacaatggttaactgcta
gtatccaactctgtatttgtcaggccctggcagagcatctcaggagacat
atatcaggctcctgtcagcaagtacttgttggcatccacaaacagtgtct
gggtttggtgatatgcatattgggaatggatccccaggtaattattaatt
atttatttaataattatttaattaaattatatatttttttatttacaatt
ttagccattactcccttttcttctcttaagatgactttagctgtccaggc
tatgttataaagaacataaattcatcaagaaactgattttttttttttct
aaaaaaaccataattccgtaagcattcatataagtaacatgtgtcaagag
tctttaatg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcatca
gaacactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatgaacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcaatgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatttagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaagagctaaagggatctgcaaccctt
atagtgaacacattatgaactaccagtaccccggagctctgactctagct
gcatataatatcaaagatggcctagtcgacatcactgaagagagtccatg
gactgcaactttatatgccaagtacagaaaccaggtcctattgggaattg
gttgcctaggtaagtggggcttgccatactactac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_100349076_100350277
seq2: B6Ng01-252E20.b_43_1251

seq1  GAATTCTCCATGGGAAATAACTGTCCCTAAAGACTTTAAAACTGATGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATGGGAAATAACTGTCCCTAAAGACTTTAAAACTGATGCTT  50

seq1  TGTTCTAGCTTCCTTGAAAGTTCTTTTTGACTGTCTTAGGGTTACTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGCTTCCTTGAAAGTTCTTTTTGACTGTCTTAGGGTTACTATTA  100

seq1  CTGTGACAAAACACCATGACCAAAGCAACATGGGGAAGAAAGGGTTTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACAAAACACCATGACCAAAGCAACATGGGGAAGAAAGGGTTTATT  150

seq1  TGGCTTATCATTATCAAAGGATGTCAGGATAGGAACTCAAATTGGGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATCATTATCAAAGGATGTCAGGATAGGAACTCAAATTGGGCAAG  200

seq1  TTCCTAGAGACAGGAGCTGTTGCAGAGGCCATGGACTAGTGTGGCTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAGAGACAGGAGCTGTTGCAGAGGCCATGGACTAGTGTGGCTTACT  250

seq1  GGCTTCTCCCCATGATTTGCTAAGCTGCTATCTTATAGAACCTAGGACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTCCCCATGATTTGCTAAGCTGCTATCTTATAGAACCTAGGACCA  300

seq1  CCAGCCCAGAGATGGTCTCACCCACATTGGGCTAGGCTCTCCCCTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGAGATGGTCTCACCCACATTGGGCTAGGCTCTCCCCTATAAA  350

seq1  TCAGTGAGATACACCACTGGCTTACCTACAGACCAACCTTATGGAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGAGATACACCACTGGCTTACCTACAGACCAACCTTATGGAGACTT  400

seq1  TTGTTAAGTTTTGCTTTGCTTTACAGTCTAATTTCTTCTTCTTCTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGTTTTGCTTTGCTTTACAGTCTAATTTCTTCTTCTTCTTTTTT  450

seq1  TATTGGATATTTTCTTTATTTACATTTAAAATTTATCCCCTTTTCTGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATATTTTCTTTATTTACATTTAAAATTTATCCCCTTTTCTGGTT  500

seq1  TCCCCTCTGAAAAACACCATCCCCCTCCCCTCCCCCTGCTTACCAACCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCTGAAAAACACCATCCCCCTCCCCTCCCCCTGCTTACCAACCCA  550

seq1  CCCACTCCCTCTTCCAGGCCCTGGCATTCCCCCACACTGGGGCATAGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCCTCTTCCAGGCCCTGGCATTCCCCCACACTGGGGCATAGAGC  600

seq1  CTTCATAGGACAAAGGGCCTCTTCCCCATTGATGTCCCATTAGGCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAGGACAAAGGGCCTCTTCCCCATTGATGTCCCATTAGGCCATCT  650

seq1  TCTGCTGCGTATGCAGCTGGAGCCATGAGTCCCACCATGTGTGCCCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCGTATGCAGCTGGAGCCATGAGTCCCACCATGTGTGCCCTTTG  700

seq1  GTTGGTGGTTTAGTCCTAGGGAGCTTTGGGGATACTGGTTAGTTCATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGTTTAGTCCTAGGGAGCTTTGGGGATACTGGTTAGTTCATATT  750

seq1  GTTGTACCTTCTATGGGGCTGCAAACCCCTTCAGCTCCTTAGGTCCTTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTACCTTCTATGGGGCTGCAAACCCCTTCAGCTCCTTAGGTCCTTTC  800

seq1  TCTAGCTCATTCACTGGGGACCCTATGCTCAGTACAATGGTTAACTGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTCATTCACTGGGGACCCTATGCTCAGTACAATGGTTAACTGCTA  850

seq1  GTATCCAACTCTGTATTTGTCAGGCCCTGGCAGAGCATCTCAGGAGACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCAACTCTGTATTTGTCAGGCCCTGGCAGAGCATCTCAGGAGACAT  900

seq1  ATATCAGGCTCCTGTCAGCAAGTACTTGTTGGCATCCAC-AACAGTGTCT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATATCAGGCTCCTGTCAGCAAGTACTTGTTGGCATCCACAAACAGTGTCT  950

seq1  GGGTTTGGTGATATGCATAT--GGAATGGATCCCCAGGTAATTATTTAAT  997
      ||||||||||||||||||||  |||||||||||||||||||||| |||||
seq2  GGGTTTGGTGATATGCATATTGGGAATGGATCCCCAGGTAATTA-TTAAT  999

seq1  TATTTATTTAATAATTATTTAATTAATTATTATATTTTTTTATTTAC-AT  1046
      |||||||||||||||||||||||||| |  ||||||||||||||||| ||
seq2  TATTTATTTAATAATTATTTAATTAAATTATATATTTTTTTATTTACAAT  1049

seq1  TTTAGCCATTA--CCCCTTTCTCCTC-TAAGATGACTTTAGCTGTCCA-G  1092
      |||||||||||  ||| ||||| ||| ||||||||||||||||||||| |
seq2  TTTAGCCATTACTCCCTTTTCTTCTCTTAAGATGACTTTAGCTGTCCAGG  1099

seq1  CTATG-TATAAAG-ACATAAAATCATCCAGCACACTGTTTTTTTTTTTTC  1140
      ||||| ||||||| ||||||| ||||| || | |||| ||||||||||| 
seq2  CTATGTTATAAAGAACATAAATTCATCAAG-AAACTGATTTTTTTTTTTT  1148

seq1  TTAAAAAAACCATAATTCCCTTTAGGGCATTCATATAAGTAACATGTG--  1188
       |||||||||||||||||| |     ||||||||||||||||||||||  
seq2  CTAAAAAAACCATAATTCCGT---AAGCATTCATATAAGTAACATGTGTC  1195

seq1  CAGAGTCTTTAATG  1202
       |||||||||||||
seq2  AAGAGTCTTTAATG  1209


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